Loxodonta africana (African savanna elephant): 100660375
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Entry
100660375 CDS
T04351
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta isoform X2
KO
K08533
RAR-related orphan receptor beta
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100660375 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lav03000
]
100660375 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lav03310
]
100660375 (RORB)
Transcription factors [BR:
lav03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100660375 (RORB)
Nuclear receptors [BR:
lav03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100660375 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100660375
NCBI-ProteinID:
XP_003407434
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALVR
VYNSSISNSLSNLNNETSSTYANGHIIDLPKSEGYYSVDSGQPSPDQSGLDITGIKQIKQ
EPIYDLTSVPNLFTYSPFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaatcgaagtgataccatgcaaaatttgtggcgataagtcctccgggatc
cactacggagtcatcacctgtgaaggctgcaagggattctttaggaggagccagcagaac
aatgcctcttactcctgcccacggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcaagagatgctgtg
aagtttgggaggatgtccaagaagcaaagggacagcctgtatgcagaggtgcagaagcac
cagcagaggctgcaggaacagcggcagcagcagagtggggaggcagaagccctcgtcagg
gtgtataacagcagcatcagcaacagcctgagcaacctgaacaacgagaccagcagcact
tatgccaatgggcacatcattgacctgcccaagtccgagggctattacagcgtggattca
ggccagccatcccccgatcagtcaggacttgacataactggaatcaaacagataaagcaa
gaacctatctatgacctcacatccgtccccaacttgtttacctacagccctttcaacaac
gggcagttagcaccaggaataacaatgactgaaatcgatcgaattgcacagaacatcatt
aagtcccatttggagacatgtcaatacaccatggaggagctgcaccagctagcatggcag
acccacacctatgaagaaattaaagcgtatcaaagcaagtccagggaagcactgtggcag
caatgtgccattcagatcactcacgccatccaatacgtggtggagtttgcaaagcggata
acaggcttcatggaactctgtcagaatgatcaaatcttacttctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccgctaaacaacactgttctgttt
gaagggaaatatggaggaatgcagatgttcaaagccttaggttctgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgaccgaggaggagattgct
ctgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaaacttcaggaaaaaatttattttgcacttcaacatgtgattcaaaagaatcac
ctggatgatgagacgctggcaaagttaatagccaagataccaaccatcacggcagtttgc
aacttgcacggggagaaactgcaggtatttaagcaatctcatccagacatagtgaataca
ctgttccctccattatacaaggagctctttaatcctgactgtgccaccgtctgcaaatga
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