Loxodonta africana (African savanna elephant): 100660380
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Entry
100660380 CDS
T04351
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100660380 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100660380 (TAF5)
03036 Chromosome and associated proteins [BR:
lav03036
]
100660380 (TAF5)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100660380 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
100660380 (TAF5)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100660380 (TAF5)
STAGA complex
100660380 (TAF5)
TFTC complex
100660380 (TAF5)
SAGA complex
100660380 (TAF5)
SLIK complex
100660380 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
100660380
NCBI-ProteinID:
XP_010587317
UniProt:
G3TYC8
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MRRLRRSRRRCGQARSLKEPPTLLLRKQGTALARSDGGTTNNGPNGGSEKRCERASSVSR
DGETPKPVIAVSTVVPARAAPVPAAVPEVSAPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGSGAPGEADGTGAEAASALLSRVTASAPGPAAPDPPSTGASGVVTVSGSAS
GTAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPAMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcttgcgaagaagcagacgaaggtgcggtcaagctagaagcctgaaggaaccg
ccaacgctgctactccgcaagcagggaacggcgctggcgaggagtgacggcggcactacc
aacaacggccccaacggtggcagcgagaaacgttgcgagcgagcgtcgtcggtcagtaga
gatggcgagaccccaaagcccgtgatagctgtctccaccgttgtcccagcgagagcggcc
ccggtgcccgccgcagttccggaagtcagtgctccccacgaccgacagactctgctggca
gtgctgcagttcctacggcagagcaacctccgcgaggccgaagaggctctgcgccgcgaa
gcccggctgttggaggaggcagtggcgggctccggagccccaggagaagcggacggtacc
ggggccgaggcggctagcgcacttctcagccgagtcaccgcctcggcccccggcccggca
gcccccgaccctccgagcaccggcgcgtcgggggtcgtcactgtctcgggctcagcctca
ggtactgcggctccggggaaagttggaagtgtagctgtggaagaccagccggatgttagt
gctgtgctatcagcttacaaccagcaaggagatcctgcgatgtatgaagaatactatagt
ggacttaaacacttcatcgaatgttcactggactgccatcgggcagagctgtcccaactc
ttttatcctctgtttgtgcatatgtacttggagctagtctacaatcaacatgagaatgaa
gcaaaatcgttctttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggat
tttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagagg
catcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacatt
gacatctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttg
gcaggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagaa
ccagaaattgaggtgcccttggatgatgaggatgaagaaggagaaaatgaagaaggaaaa
cctaaaaagaaaaagcctaaaaaagatagtattggttcaaaaagcaaaaaacaagatccc
aatgctccacctcaaaacagaatccctcttcctgagttgaaagattccgataagctggat
aagataatgaatatgaaagaaaccaccaaacgagtacgccttggtccagactgcttgccc
tctatctgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcact
gatgattctagtctgattgctggaggttttgcagattcaactgtcagagtatggtctgtg
acacccaaaaagcttcgcagtgtgaaacaagctgcagatcttagcctcatagacaaagaa
tctgatgatgtcctagaaagaatcatggatgagaaaacagcaagtgagttgaagattttg
tatggtcacagcgggcctgtctatggagccagcttcagtccagataggaactacctgctt
tcctcttcagaagatggaactgttagattgtggagtcttcaaacatttacttgcttggtg
ggatataaaggacacaactatcctgtatgggacacgcagttttctccatatggatattat
tttgtgtcaggaggtcatgaccgagtagctcggctctgggctacagaccactatcagcct
ttaaggatatttgctggacatcttgctgatgtaaattgtaccagattccatccaaactct
aattacgttgctacgggctctgcagacagaactgtgcggctttgggatgttctgaatggg
aactgtgtaagaatcttcactggacacaagggaccaattcattccttgacattttctccc
aatgggagatttctagctacaggagcaacagatggcagagtactcctttgggatattgga
catggtttgatggttggagaattaaaaggccacacagatacagtctgctcacttaggttt
agtagagatggtgaaattttagcatcaggttcaatggataatacagtccggttgtgggat
gctatcaaagcatttgaagatttagagaccgatgactttactacagccactggccatata
aatttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacacca
gttgtacacctccactttactcgaagaaacttggttctagctgcaggagcttatagtcca
caataa
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integrated database retrieval system
