Loxodonta africana (African savanna elephant): 100660386
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Entry
100660386 CDS
T04351
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X2
KO
K06753
roundabout, axon guidance receptor 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04360
Axon guidance
lav04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100660386 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100660386 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100660386 (ROBO1)
Cell adhesion molecules [BR:
lav04515
]
Immunoglobulin superfamily
ROBO family
100660386 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
Big_4
DUF7908
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
100660386
NCBI-ProteinID:
XP_003410234
LinkDB
All DBs
Position
Unknown
AA seq
1606 aa
AA seq
DB search
MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT
IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVVAGDMGSYTCVAENMVGKA
EASATLTVQVGSEPPHFVVKPRDQVVAMGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAK
LGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRA
ANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPSGASHGESEWLVFDVRTPTKNSVVIPELRKGVNYEIKARPFFN
EFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVTWQPPPEDTQNGMVQEYKVW
CLGNETRYHINKSVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVTYQRGGEAVSSGGRPGLLNISEPAAQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSN
LTTYSRPADCIANYNNQLDNKQTNLMLPESSVYGDVDLSNKINEMKTFNSPNLKDGRFVN
PSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPSGQQKQEVAPIQYNIMEQNKLNKD
YRANDTIPPTIPYNQAYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADL
LPPPPVHPPPHSNSEEYNVSVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRG
AASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPI
SPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESS
VTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQD
AAGRRHFHSSQCPRPTSPVSTDSNMSAAVMQKARPAKKQKHQPGHLRREAYTDDLPPPPV
PPPAIKSPTVQSKAQLEVRPVMVPKLPPVEARTDRSSDRKGGSYKGREVLDGRQVADMRT
NPGDLREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSS
SMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagcctgctcacttttacctctttggattaatatgtctctgttcaggctcc
cgtcttcgtcaggaagattttccacctcgtattgttgaacacccttcagatttaattgtc
tcaaaaggagaacctgcaactttgaactgtaaagctgaaggacgccccacacccactatt
gaatggtacaaagggggcgagagagtggagacagacaaagatgaccctcgttctcaccga
atgttgctgccaagtggatctttatttttcctacgtatagtacatgggcgaaaaagtagg
cccgatgaaggggtgtacgtctgcgtggcaaggaattacctcggagaggctgtgagccac
aacgcgtcgctggaggtagctattctgcgggatgacttcagacagaacccttccgacgtc
atggtggcagtgggagagcctgcagtgatggaatgccagcctccgcgaggccatccggaa
cccaccatttcatggaagaaagatggctctccgctggatgataaagatgaaagaataact
atacgaggaggaaagctcatgattacttacacccgaaagagtgatgctggcaaatatgtt
tgtgttggtaccaacatggttggggaacgtgagagtgaagtagcagagctaactgtttta
gagagaccatcgtttgtgaagaggcctagtaacttggcagtgacagtggatgatagtgcg
gaatttaaatgtgaggcccgaggagaccctgtgcctacagtaagatggaggaaagatgat
ggagagctgcctaaatccagatatgaaattcgagacgatcataccttgaaaattcggaag
gtcgtggctggtgatatggggtcatacacttgtgttgcagaaaatatggttggaaaagct
gaagcctcagctactctgactgtacaagttgggtctgaacctccacattttgttgtcaaa
ccccgggatcaggttgttgccatgggacgaactgtgactttccagtgtgaagcgactgga
aaccctcaaccagctattttttggaggagagaggggagtcagaacctgcttttctcatat
cagccaccacagtcatccagccggttttctgtgtcccagactggtgacctcactattact
aatgtccagcgatctgatgttggttattatatctgccagaccttaaatgttgctggaagt
atcatcacaaaagcatatttggaagttactgacgtgattgcagaccggcctcccccagtc
attcgacaaggtcctgtgaatcagactgtagcagtggatggcactttagtcctcagctgt
gtggccacaggcagtccagtgcccacgattctgtggagaaaggatggagtccttgtttca
acccaggattctcgaatcaaacaactggagactggcgtgctgcagatccgatatgctaag
ctgggtgacactggtcggtatacctgcattgcatccacccctagtggtgaagcaacatgg
agtgcatacattgaagttcaagaattcggagttccagttcagcctccaagacccactgac
ccaaatttaatccccagtgccccctcaaaacctgaagttacagatgtcagcagaaacaca
gtaacattgtcatggcaaccgaatttgaattcaggtgcaactccaacatcttatataata
gaagccttcagccatgcatctggtagcagctggcagaccgtagcagagaacgtgaaaaca
gaaacatttgccattaaaggactcaaacctaatgcgatttaccttttccttgtgagggca
gctaatgcgtatggaattagtgatccaagccagatatcagatccagtgaaaacacaagat
gtcccaccaacaagtcagggagtggatcacaagcaggtccagagagagctgggaaatgtt
gtcctgcacctccacaatcctaccattctttcctcctcttcaattgaagtgcactggaca
gtagaccaacagtctcagtatattcaaggctataaaatcctctatcggccatctggagcc
agccatggtgaatcggagtggctggtttttgatgtgaggaccccaaccaaaaatagtgtg
gttatccctgaactcagaaagggagtcaattatgaaattaaggcccgccctttctttaat
gaatttcagggagcagacagtgaaattaagtttgccaaaaccctggaagaagcacccagt
gccccaccccaaagtgtaacggtgtcaaagaatgatggaaatgggactgcaattcttgtt
acttggcagccacctccagaagacactcaaaatggaatggtccaagagtacaaggtttgg
tgtctgggcaatgaaacccgataccatataaacaagtcggtggatggttccaccttttct
gtggtcattccgtctctggttccagggatccgatatagtgtggaagtggcagccagcaca
ggagctgggcctggggtgaagagcgagccacagttcatccagttagattctcatggaaac
cctgtatcacctgaggatcaagtcagcctcgctcagcagatttcagatgttgtgaagcag
ccggccttcatagcaggtatcggggcggcctgttggatcatccttatggtctttagcatc
tggctttatcgacaccggaagaagaggaacggacttactagtacttacgcgggtatcaga
aaagtaacttatcagagaggaggcgaagctgtgagcagtggagggagaccaggacttctc
aacatcagtgaacccgctgcgcagccctggctggcagacacgtggcctaatactggcaac
aatcacaacgactgctccatcaattgctgcacagcaggcaacgggaacagcgatagcaac
ctgacgacctacagtcggccagctgattgtatagcaaattataacaaccaactggataac
aaacaaacaaatctgatgctccctgagtcaagtgtttatggtgatgtggaccttagtaac
aaaatcaatgagatgaaaaccttcaatagcccaaatctgaaggacgggcgttttgtcaat
ccatcagggcagcccactccttatgccaccacgcagctcatccagtccaacctcagcaat
aacatgaacaatggcagtggggattcgagcgagaagcactggaaaccgtccggacagcag
aaacaagaagtggcaccaattcaatataacatcatggagcaaaacaaattgaataaagat
tatcgagcaaatgacaccattcctccaactatcccatacaaccaggcatatgaccagaat
acaggagggtcttacaacagttcagaccgaggcagtagtacctctgggagtcaagggcac
aagaaaggggcaaggacacccaaagtaccaaaacagggtggcatgaactgggcagacctg
ctcccacctcccccagtgcatcctcctccacatagcaatagtgaagagtacaacgtatct
gtggatgaaagttatgaccaagaaatgccatgccctgtgccaccagcaaggatgtatttg
caacaagatgaactagaagaggaggaagatgaacgtggccccacacccccagtgagagga
gcagcttcttctccagcggccgtgtcctatagccatcagtccactgccactctgacaccc
tccccacaggaagaactccagcccatgttacaggactgcccagaggagattggccacatg
cagcaccagcccgaccggagacggcagcccgtgagccctcctccaccccctcggccaatt
tccccaccgcatacctacggctacatttcaggaccccttgtctcagatatggatacggat
gcgccagaagaggaagaagacgaagccgacatggaagtagccaagatgcaaaccagaagg
cttttgttacgtgggcttgagcagacccctgcctccagtgtcggggacctagagagctct
gtcaccgggtccatgatcaatggctggggctcagcctcagaggaggacaacatttcaagt
ggacgctccagtgttagctcttctgatggctccttcttcaccgatgctgattttgcccag
gcagtcgcagcagcagccgagtatgcaggtctgaaagtggcacgacgtcaaatgcaggac
gctgccggccgccgacattttcactcatctcagtgccctagacccacaagtcctgtatct
acggacagcaacatgagcgctgctgtaatgcagaaggccagaccagccaagaaacaaaag
caccagccaggacatctgcgcagagaggcttacacagatgatcttccaccccctccggtg
ccaccacctgctataaaatcacccactgttcaatccaaggcacaactggaggtgcggcct
gtaatggtgccaaaactccctcctgtagaagcaagaacagacaggtcatcagatcgaaaa
ggaggcagctacaaggggagagaagtattggatggaagacaagttgctgacatgcgaaca
aatccaggtgatcttagagaagcacaagaacagcaaaatgatgggaaaggacgaggaaac
aaggcagcaaaacgagaccttccaccagcaaagactcatctcatccaagaggatatccta
ccctactgtagacctacttttccaacatcaaataatcccagagatcccagttcctcaagc
tcaatgtcatctagaggatcaggaagcagacaaagagaacaagcaaatgtaggtcgaaga
aacattgcagaaatgcaagttctcggaggttatgaaagaggagaagataataatgaagaa
ctagaggaaactgaaagctga
DBGET
integrated database retrieval system
