Loxodonta africana (African savanna elephant): 100660437
Help
Entry
100660437 CDS
T04351
Symbol
RIMS1
Name
(RefSeq) LOW QUALITY PROTEIN: regulating synaptic membrane exocytosis protein 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04517
IgSF CAM signaling
lav04721
Synaptic vesicle cycle
lav04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100660437 (RIMS1)
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
100660437 (RIMS1)
04721 Synaptic vesicle cycle
100660437 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100660437 (RIMS1)
Membrane trafficking [BR:
lav04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
100660437 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
100660437 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
100660437
NCBI-ProteinID:
XP_003404446
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MSSAVGPXRPRPRTVPPPCKSCRTXAHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICH
KTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFF
GGGPQQPSQDGTLSDTASGAGSEVPREKKARLQERSRSQTPLSTAAASCQDTAPPSTQPD
RSKGTEPSQQALGPEQKQVSSRSRSEPPRERKKTSGLSEQNGKGALKSERKRVPKSSVQP
REGAAEERERKERRENRRLEKGRSQDYPDVPEKREEGKAPEDEKQRKEEEYQTRYRSDPN
LARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPHTEAGAALPESKPAKRAPAAARAS
PPDSPRAYSAERTAEPRAPGAKQLTNHSPPAPRHGPVPAEAPEPKAQEPLRKQSRLDPSS
AGLIRKAKREKVESMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVST
PEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRDTSPISSHPVTWQPSKEGDRLIGRV
ILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWN
GKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKME
RPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNP
YVKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQE
EESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPHPSPFMARRHIHGESSSKKLQR
SQRISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGS
DQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRSRDVDSQYLSEQDSEL
LMLPRAKRGRSAECLHTTRHLVRHYKTLPPKMPLLENGSHWNIYSLILSACTKTRSVTRQ
NMSLHHECFNSRILRYTDELLVSELQPSLDRARSASTNCLRPDTSLHSPERERGRWSPSL
DRRRPPSPRIQIQHASPENDRHSRKSERSSIQKQTRKGTASDAERVLPPCLSRRGHAAPR
ATDQPVIRGKHPTRSRSSEHSSVRTLCSMHHLAPGGSAPPSPLLTRMHRQGSPTQSPPAD
TSFSNRRGRQLPQVPVRSGSIEQASLVVEERTRQMKMKVHRFKQTTGSGSSQELDREQYS
KYNIHKDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRISSFT
PKMQGRRMGTSGRAITKSTSVSGEMYTLEHNDGSQSDTAVGTVGAGGKKRRSSLSAKVVA
IVSRRSRSTSQLSHTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSSE
GNLIFPGVRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRA
RSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQ
VIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLTPLTRRASQSS
LESSTGPPCIRS
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggcagtgggcccgnnccgtcctcgcccacgcacggtgcctcccccatgcaag
agctgccggacctgagcccacctgaccgaggaggagaggaacattatcatggcagtgatg
gaccgacagaaggaagaggaggaaaaagaagaagccatgctcaagtgtgttgtcagggac
atggcgaagcctgctgcctgcaaaacaccaagaaatgctgaaaaccagccccaccaacct
tcaccgagattgcatcaacagtttgaaagctataaggaacaagtgagaaaaataggggaa
gaagcgcggcgttaccagggcgagcacaaagacgatgcgccgacttgtggaatctgccat
aaaacaaagtttgctgatgggtgtggccacctctgctcctactgtcgcacgaagttctgc
gctcgctgcggaggccgagtatctctgcgatcaaacaacgaggacaaagtggttatgtgg
gtatgcaatttatgtcgaaagcaacaagaaattttaaccaaatctggggcatggttcttt
ggaggtggccctcagcagccaagtcaagatggaaccctaagtgatacagcttctggtgcc
ggttctgaggtaccaagagaaaagaaagcacgactccaagagcgttcgcggtctcagacg
cccctgagcacagcagctgcctcctgccaggatactgctcctcccagcacacaaccagac
aggagcaaagggactgagccctcacaacaagccttggggcccgaacagaagcaagtttca
tccaggtctagaagtgagcctccgagagagagaaagaagacttcagggctttctgagcag
aatggcaaaggggccctgaagagcgagaggaaacgcgtgccaaagtcttcagtgcagccc
agggagggcgccgcggaagaacgcgagcggaaagaaaggcgggaaaaccgaaggctggag
aaaggacggtcacaggactacccagatgtgcccgaaaaacgtgaggagggcaaagcgccg
gaggacgaaaaacaaaggaaagaggaggaataccagaccaggtaccgcagcgacccgaac
ctggcgcgatatccggtgaaaccgccaccggaggagcagcagatgcgcatgcacgcccgg
gtgtcccgcgcgaggcacgagcggcgccacagcgacgtggcgctcccgcataccgaggcg
ggcgccgcgctgccagagagcaagcccgccaagcgcgcgccggctgcagccagggcctcg
ccgccggactcgccgcgggcctactcggcggagaggactgcggagcccagggcgccgggc
gccaagcagctgacaaatcacagcccgccggcgcccaggcatgggcccgtccccgcagaa
gccccggagcccaaagcccaggagcccctcaggaagcagagccgcctggatcccagctct
gccggcctcattcggaaggctaagcgcgagaaagtggaatccatgctgcggaacgactcg
ctgagctccgaccagtccgaatcagtgcggccgtcccctcccaagccgcaccggtccaag
aggggcggcaagaagcggcagatgtcggtgagcagctcagaggaggagggcgtgtcgaca
cccgagtacaccagctgcgaagacgtggagctggagagcgagagcgtcagcgagaaaggt
gacttggattattactggttggatcctgccacgtggcacagccgggacacatcacccatt
agttcgcatcctgtaacgtggcaaccatctaaagagggagaccgtttaattggacgtgtt
attcttaacaagagaacaaccatgcccaaagaatcaggtgcattactgggtctaaaagtt
gttggaggaaaaatgactgacttaggacgccttggtgccttcatcaccaaagtaaagaag
ggtagcctagcagatgtggttggacatctaagagcaggggatgaagttctagaatggaat
ggtaaacccctgcctggagctacaaatgaagaagtttacaacattattttagaatcaaaa
tcagaacctcaagttgaaattattgtttcaaggcctattggtgacattccaaggattcct
gagagctcccatcctccactagagtccagttcaagctcctttgaatctcagaagatggaa
aggccttccatttctgttatttctccaacaagtcctggagctctgaaagatgctccacaa
gtcttaccagggcaactttctgtgaagctgtggtatgataaagtgggacaccagctgatt
gtaaatgttctgcaagcaacagatctaccccctagagtagacgggcgccccaggaatccc
tatgtaaaaatgtattttcttccagatagaagtgataaaagtaaaaggaggaccaaaaca
gtaaagaaagtactagagccaaaatggaatcaaacctttgtctattcacatgtacatcgt
agagattttagagaacgaatgttagaaataactgtgtgggatcaaccaagagttcaagaa
gaagaaagtgaatttcttggagagatcctcatagagttggagacagcacttctagatgat
gaaccacactggtataaacttcagacacatgatgaatcctcactacctctgcctcatcca
tcccctttcatggccaggcgacatattcatggagaaagctctagcaaaaagctacaaaga
tctcagcgaatcagtgatagtgacatctcagattatgaggttgatgatggtattggagta
gttcctccagtaggttataggtctagtgctagagaaagtaaatctacaacattaactgtg
ccagaacagcaaagaacaactcatcatcgctcacgttcagtatctcctcatcgcggcagt
gatcagggaaggccgcgttcacgtttgccaaatgtgccattacagaggagtttagatgaa
attcatccaacaagaaggtcacgttctccaaccagacaccatgatgcctcccgaagtcca
gttgatcacagatccagagatgtggatagtcagtatttatcagaacaagacagtgagctt
cttatgctgcccagagcaaaacgaggacgaagtgcagaatgcctacatactaccagacat
cttgttaggcactataaaacattaccacccaagatgcctttgttagagaatggttctcac
tggaatatttacagcttgattttgtctgcatgtactaaaaccagatcagtgactagacag
aacatgtccctccatcatgaatgctttaactcaagaatattgagatatactgatgaatta
ttggttagtgaactgcagccctcccttgacagggctaggagtgctagtaccaactgcttg
agaccagatactagtttgcattcaccagaacgagaaaggggtagatggtccccctcccta
gataggagacgacctcctagccccaggattcaaatccagcatgcgtctccggagaatgac
aggcactccagaaagtctgaaagatctagcatccaaaaacagactaggaaaggcactgcc
tctgatgcagaaagggttctcccaccatgtctttctagaaggggacacgcagccccaaga
gcgactgatcagccagtcattaggggaaaacatcccactcgctcaaggtcgagtgagcac
tctagtgtcagaacactgtgttctatgcaccaccttgcccccggagggtcggcgccacct
tctccgcttctgacaagaatgcaccggcaagggagtccaacccagtctcctcctgcagac
acatccttcagcaatcgcaggggaagacagctgccacaagtgccagtgagaagcggcagt
atagaacaagcaagcttagtagtggaggagcgaacaagacaaatgaaaatgaaagtgcat
cgatttaagcagacaacagggtctggttctagtcaagaacttgatcgcgagcaatattcc
aagtataacatacataaagatcagtacagaagctgtgataacgtctctgccaaatcatca
gatagtgatgtcagtgatgtgtccgccatttcccgaaccagcagtgcctcacgcctcagc
agcacaagctttatgtcagagcaatctgagcgccccaggggtagaatcagttcatttacc
cctaaaatgcaaggcagacggatgggaacttcaggaagagccatcacaaagagcaccagt
gtgagtggagagatgtacacactggagcataatgatggcagtcagtcggacacagctgtg
ggtacagttggagcaggtggaaagaaaaggagatccagtctgagtgccaaagtggttgcc
atagtgtctcgaaggagtagaagcacatctcaacttagccacacagagtcaggccacaag
aagttaaaaagcaccatacagagaagcacagaaacaggaatggcagctgaaatgaggaag
atggtaaggcaaccaagccgagagtctactgacggcagcatcaacagttacagctccgag
ggaaacttaatatttcctggagtgcgactaggagctgacagtcaattcagtgattttctt
gacggactgggaccagcccagcttgttggcagacaaaccctagccacccctgctatgggt
gatatacaaattggaatggaggataaaaagggccaattagaagttgaagttattagagca
cgaagcctcacgcaaaaacctggttccaaatctacacctgctccatatgtcaaagtatat
cttttggaaaatggggcctgtatagccaagaagaagacaagaattgcacgaaaaaccctc
gaccccttgtatcaacagtctctggtttttgatgaaagtccacagggtaaagttcttcag
gtgattgtctggggcgactatggcagaatggaccataaatgctttatgggtgttgctcag
atcttgttggaagaacttgacctgtccagtatggtaatcggatggtacaaattgttccca
ccttcatcgctggtggatcccacactcactcccctaacccgccgggcttcccagtcatct
ctggaaagttcaactgggccaccctgcattcgatcatag
DBGET
integrated database retrieval system
