Loxodonta africana (African savanna elephant): 100660514
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Entry
100660514 CDS
T04351
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog isoform X2
KO
K04638
intraflagellar transport protein 57
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav05016
Huntington disease
lav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100660514 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
100660514 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lav03037
]
100660514 (IFT57)
Cilium and associated proteins [BR:
lav03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
100660514 (IFT57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT57
MCPsignal
DUF745
MscS_porin
Exonuc_VII_L
SpecificRecomb
Mod_r
Motif
Other DBs
NCBI-GeneID:
100660514
NCBI-ProteinID:
XP_003418978
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MAAAAAVVTPSGLEDGVSRPRGEGAGEVAVERGPGAAYHMFVVMEDLLEKLKLLRYEEEV
LRKDSLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKAGRLFEQPQEYDDPNATISNILS
ELRSFGRTADFPPSKLKSGYGEHVCYVLDCLAEEALKYTGFTWKRPTYPVEELEDETVPE
DDAELTLNKVDEDFVEEETDNEENFIDLNVLKAQTYRLDVNESAKQEDILEPTTDAAEWS
LEVERVLPQLKVTVRTDNKDWRVHVDQMHQHKGGIESALKETKGFLDKLHNEISRTLEKI
GSREKYINSQLEHLVQEYRSAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGAPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKSNMTRDMHATV
IPEPTIGSY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccgcagcggtggtcacgccgtcgggcctggaggacggggtatctcggcct
cgcggcgaaggggccggagaggtggccgtggagcgcgggcccggcgcggcctaccacatg
ttcgtggtgatggaggaccttctggagaagctgaagctgctccgctatgaggaggaagtc
ctgcggaaggacagcctgaagcccccgtccagacactacttcgcactgcctaccaaccct
ggtgagcagttctacatgttttgcacccttgctgcttggttgattaataaagcaggacgt
ctctttgagcagccccaagaatacgatgatcctaatgcaacaatatctaacatattatca
gagcttcggtcatttggaagaactgcagattttcctccttcaaaattaaagtctggttat
ggagagcatgtatgctatgttcttgattgtttagccgaagaagcattaaaatatactggt
ttcacctggaaaaggccaacgtacccagtagaagaattagaagatgaaactgttccagaa
gatgatgcagaattaacattaaataaggtggatgaggactttgtggaagaagagacagac
aatgaagaaaactttattgatctcaatgttttaaaggcccagacttatcgcttggatgtg
aacgagtctgccaaacaagaagatattttggaacccacaacagatgctgcagaatggagt
ctagaagtggaacgtgttctaccacaactgaaagtcaccgtcaggactgacaataaggat
tggagagtccacgttgaccaaatgcaccagcacaaaggtggaattgaatctgctctgaag
gagaccaagggctttttggacaaactccacaatgaaattagtagaactctggaaaagatt
ggcagccgagagaagtacatcaacagtcagcttgagcacttggttcaagaatatcgttca
gctcaagcccagctgagtgaggcaagggagcgataccagcagggaaacggcggagtaact
gaaaggacccggctgctgtctgaggttacagaagaattagagaaggtgaagcaggagatg
gaagaaaagggcagcagcatgactgacggcgctcctttggtgaaaattaaacagagctta
accaaactgaaacaagagactgttcagatggacattagaatcggtgttgtggagcacaca
ttactgcaatcaaaactgaaggagaaatccaacatgacgagggacatgcatgctacagtt
attccagaacctacaataggctcttattaa
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