Loxodonta africana (African savanna elephant): 100660596
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Entry
100660596 CDS
T04351
Symbol
CHD9
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100660596 (CHD9)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100660596 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
100660596
NCBI-ProteinID:
XP_023411370
UniProt:
G3TF17
LinkDB
All DBs
Position
Unknown
AA seq
2903 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMADFEQLNQFDSLKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQSNGLFPDVGD
GSPMWGHQTATSISNQNGSPFHQRGHSHSMHQNKSFVAHHDFTLFQANEQPTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMDVNVSGPHRVSVNHPPQITNASASQQSLSMQQFSQTSNPS
VHFLKCSNHQEGNFNGPSPNLTSCSVSNSQQFSSHYSFSSNHISSNSLLQSSAVLASNHT
NQTLSDFTGSNSFSPHRGIKQESTPHILNPSTSSLNSNNFQMLHPSHPQGNYSNSKLSPV
HMNFPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLTQ
YDESAFGQDSSSHVLDHDLDQQFTSHLVTRPSDVAQAQLQSQARSWHSSLVHQQHLQDRN
RLCLQRQPPSSKKSDGSGTYTKLQNTQVRVMSEKKQRKKMESESKQEKANRIISEAIAKA
KERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSRLKEKTKIGKL
IITLGKKQKRKNESSDETSDTEQMTQHALKDEDSQKRRSNRQIKRKKYAEEAEGKQCEEA
VKGSMKIKRNSAPLLGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEMSPGVMIDIEEFF
VKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFSDMEEEPFNPDYVEVDR
VLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRRL
DRPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSIT
FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLVSRQMIQQYEMYFRD
SQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMN
LEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPM
MLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTM
MELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAG
GHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC
TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMF
DRASLKLGLDKAVLQSMSGRESNGGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEE
DIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAI
SGRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFR
VEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLI
TPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYK
KHIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDF
DADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDGEDPEY
KPAPAVFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNK
NRQIQQMPPAFPMPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVF
DPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPIT
EERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPIWWECGPHDRDLLVGAAKH
GVSRTDYHILRDPELSFMAAQRNYSQSKMAHCRTSTPLLQQYQVALSASSLTSLPRVLDA
KGIILEDMKVKNENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGK
GETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSS
CSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSEESDSEEEEIQKREGTPHMKAYD
EESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVL
KGKWPSARRSYDANTVASFYTTKLLDSPGAATEYSEPSVPTPPGAGVKEEHDQSPQMSKV
KKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRSFDTEDGALGQQQYLTRLRELQSASETS
LVNFPRCPPVSGTSIQSALGANGVILDNQPIVKKRRGRRRNVEGVDILFFNRNKPPNHVT
IGITTSQVSTGISPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEH
PGYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAF
APPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKS
GISKAAAAAAAAANVTSVSGSPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMP
ASLSSGGEAKNMATMFPMLLSGMAGLPNLLGMGGLLTKPAESGTEEKKGNDSKELEGKKE
RTESQNSENGGENSVSGSPSTSSSAALNTAAAANPLAINPLLLSNILYPGMLLTPGLNLH
IPTLSQSNTFDVQKNKNNDLGSSKSVEVKEEDSRGRDQEDKGGTELSPLNENSTDEGSEK
ADASSGSDSTSSSSEDSDSSNED
NT seq
8712 nt
NT seq
+upstream
nt +downstream
nt
atgacagacccaatgatggactttttcgatgatgccaatctttttggtgagaccttagaa
ggtttgtcagatgacgcatttgtacaaccaggacctgtctcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgttcagggtactcca
acacatcagaagatggctgatttcgaacagttaaatcagtttgattcactaaaatttcat
caagttaatcagtcttttggtagcccagctgaacatgtgttgtctccacactctcagttt
aattgctctccgatccacccgcaaaaccaatccaatggtttgtttccagatgtaggagat
ggcagtccaatgtggggccatcagacagctactagcatctcaaatcaaaatgggtctcct
tttcaccaacgaggacattcacactctatgcatcaaaataaaagctttgtggcacaccat
gactttaccttatttcaggccaatgaacaaccgacacagtgtacatcactacgctcacaa
caaaacagaaataatcttaacccagggcaaaattctcttagccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccacccaccacaaattactaat
gcatctgcttcacaacagtctctttcgatgcagcagttttctcagacgtcaaacccttca
gtacacttcctcaagtgtagtaatcatcaagaaggaaattttaacggaccttctccaaat
ctgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcatatctcatcaaacagtcttcttcagtcctctgcagttcttgcttctaatcataca
aatcagactttatctgattttactggaagtaattccttttcacctcacaggggaatcaag
caagaatccactccgcatatcctaaaccccagtacatcatcgttgaattctaataatttc
caaatgttgcatccgtcacatcctcagggtaattatagcaattcaaaattatctcctgtg
cacatgaacttcccagatcctgttgactcaggaactcaaatgggccatttcaatgatcat
gtagaaactaatggcttttcgtctttagaagagaatttacttcatcaagtggagtctcaa
accgagccgttcacaggacttgacccagaggaccttcttcaggagggtctccttacccaa
tatgatgagtcagcatttgggcaagatagttcaagtcatgtcttagatcacgaccttgat
cagcagtttacttcacatcttgtaacacggccttcggatgtggctcaagctcagctgcag
agtcaggcccgtagctggcattcctcgcttgttcatcagcagcacttacaggacagaaac
cgcctgtgtttacagcgacagcctccatcttccaagaagagtgatggttctgggacatat
actaagttgcagaatacccaggtgagggtcatgtctgagaagaagcaaagaaaaaagatg
gaatcagaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagca
aaggagcgtggggagcgcaatattccacgagtaatgagccctgaaaactttcctagtgct
tcagttgaaggaaaagaggaaaaaaaaggcagaaggatgaaatccaagcccaaggacaaa
gagagcaaaaaaacaaaaacttgttccagattaaaagagaaaacaaaaattgggaaactc
attattacattgggtaagaaacaaaaaagaaagaatgagtcttcagatgaaacgtctgat
acagagcagatgacacagcatgcattgaaagatgaggactctcaaaaaagaagatcaaat
cgacaaattaaaagaaaaaaatatgcagaagaagcagaagggaagcaatgtgaagaagca
gttaaaggttctatgaaaataaaaagaaattcagctcccttacttggtgaacagccctta
caattatttgtggagaatcccagtgaagaagatgctgcaattgtggacaaaatattatct
tctagaattgtgaaaaaggaaatgtcccctggagtgatgattgatatagaagaatttttt
gtaaaatacaagaattactcctatcttcactgtgaatgggctacagaagaacagcttttg
aaagataaaaggatccagcagaaaatcaaacgatttaaattgagacaagcacaaagagca
catttcttctcagatatggaagaagaaccatttaacccagactatgttgaagtagacaga
gtattggaagtttcattttgtgaagataaggatactggtgagcctgttatttactactta
gtaaagtggtgctcattgccatatgaagatagtacttgggaactaaaagaagatgtagat
cttgcaaaaatagaagagtttgaacaattgcaagcttcaaggcctgacacaagacgcttg
gatcgtccgccttctaatatttggaaaaaaatagatcaatccagggactacaaaaatggc
aaccaactcagggaatatcaactagaaggactcaactggctgttgttcaattggtacaat
agacgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcagtcaattaca
ttcctctacgaaatcctcctgaccggtatacgaggacctttcctgattatcgctccactt
tccactattgcaaactgggagagagagtttcgtacatggactgatattaatgtggtggtt
tatcacgggagcctggttagcagacaaatgatacagcagtatgagatgtacttcagggac
tcccaggggcgtatcattcgaggagcttacagattccaagccatcatcactacttttgaa
atgattcttggaggctgtggagaacttaatgcaattgaatggcgatgtgtgattattgat
gaagcacataggttaaaaaataaaaattgtaaactcctggaaggtctgaaactcatgaat
ctggaacacaaggtgcttttgactggcacgcctctccaaaatacagttgaagaactattc
agtcttcttcattttcttgaacccttaaggtttccctctgaatcaacatttatgcaagaa
tttggggatctgaaaacagaagaacaggtacagaaacttcaagctatcctgaaaccaatg
atgttgagacgattgaaagaagatgtggaaaaaaagttggcacctaaggaagaaaccatc
attgaagtagaacttactaacattcaaaagaaatactaccgggctattttggagaagaac
ttttcgtttttgtccaaaggagcaggacagactaacgtacctaacttggtgaacaccatg
atggagctcagaaagtgctgtaaccatccataccttattaaaggtgctgaggagaaaata
cttggagaatttagagatacgtataatccagctgcttctgattttcatcttcaagcaatg
atccagtccgctggtaaattggtccttatagataagctgctccccaaaatgaaagcaggg
ggtcataaagtgctcatcttctctcagatggtacggtgccttgacatcctggaggactat
cttatacataaaagatatttatacgagcggattgatggaagagtcagagggaatctgcga
caagctgctatagaccgatttagcaaacctgattcggatcgatttgtttttcttctgtgt
acccgagctggtgggttaggcatcaacctaactgcagctgatacatgtattatttttgat
tctgattggaatcctcaaaatgatcttcaggcccaagctcgttgccacagaattggtcag
aacaaagcagttaaagtctaccgactggtaactcgtaattcatatgagagagagatgttt
gaccgagccagcttgaaactgggtctggataaagctgtgttacagagcatgagtggaaga
gaaagcaatggcggtggtattcaacagctttctaaaaaagaaatagaagacctgctgcga
agaggtgcgtatggtgccattatggaggaagaagatgaaggctctaaattctgtgaagag
gatattgatcagattttacaacgtcgtacaaaaactattacaattgaatcagaaggacgg
gggtcaacatttgccaaggcaagttttgtggcctctgggaaccggacagatatttcctta
gatgatcccaacttctggcagaaatgggctaaaaaggcagaaatagatatagatgccatc
agtggcagaaacagcttggttattgacactccaagaattaggaagcaaacaagacccttt
agtgccacaaaagatgaattggctgagttatctgaagctgaaagtgaaggagatgagaag
cccaaactccggagaccatgtgaccgttccaatggctatggaagaactgaatgctttaga
gtagagaaaaatctgctagtttatgggtggggccgatggagagagattctctctcacggt
cgttttaaaaggcagctgaatgagcatgatgttgagataatttgccgagccctcttggca
tattgccttgttcactaccgaggagatgagaaaattaaagggttcatatgggatctcatt
actccaactgaagatggccaaacaagggagctgcagaatcatctaggcctgtcagctccg
gtacccagaggtcgtaaagggaagaaggtgaaaactcaaacaagctcatttgatatacaa
aaagcagaatggcttcgaaaatataatcctgagcagctacttcaagatgaaggctataaa
aaacatataaaacaccattgtaataaggttttgcttcgtgtgagaatgctgtattatcta
aagcaagaagtcattggaaatgagtgtcaaaaagtatttgatggcgttgatgcaagtgac
attgatgtttgggtcccagagccagaccactcagaagttcctgctgagtggtgggatttt
gatgctgataaatcactccttattggagtttttaaacacggttatgaaaaatataacact
attcgagcagacccagcattgtgcttcttggaaagagtggggaaacctgatgagaaagca
gttgccgctgaacagagagcaaatgattacatggatggggatggggaagatccggaatac
aaacctgccccagctgtctttaaagatgatatagaggatgatgtttcttcaccaggcgac
cttgttatagcagatggcgatggtcaactgatggagggtgataaagtttattggccaact
cagtcagctttaaccacgcggctgaggcgtctcatcactgcatatcaacgtaccaataaa
aacagacagatccagcagatgccgccagccttcccaatgcctgccagtgtcatgcagcct
ctttacgaagaagccactcttaaccctaaaatggcagccaaaatagaaagacagcagaga
tggacaaggagagaagaagctgacttttatagagttgtatctacattcggagtggtattt
gatcctgacagaggccagtttgattggacaaaatttcgagctatggctcggctgcataag
aaaactgatgatagtttggagaagtatttgtatgcattcatgtctatgtgtcgaagggtt
tgccgtcttccttccaaagaagaattggtggatccaaatatttttatccagcctatcaca
gaagaacgtgcttctaggactttgtatcgcattgaacttctaagaaaagtacgggaacag
gctctccgacatccacagttatttgaacgcttaaagctttgccatccaaatccagactta
cccatctggtgggaatgtggccctcatgatagggatttacttgttggagctgctaaacat
ggagtgagccgaacagactatcacattcttcgtgatcctgaactctcatttatggcagct
caaaggaactacagtcaaagtaagatggctcattgcaggacttctaccccacttttacag
caatatcaagtagcactttctgcttcttctctcacctctctacctagagtcctagatgct
aaaggtataattctagaggatatgaaagttaaaaatgaaaaccttaaagaggagcctcag
tcttctgaagaagaatctatgtcttctgaggaaaccaggacactaataaagtctgagcct
gtcagtccaaagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaa
ggagaaacagacagacgcatggttgcagccagaacagaacccctaactccaaacccagct
tctaagaaacagcgagtccacaaacgagggtcagaatctagttctgattctgactctgat
tccgagaggtcatcttgttcttccaggtcatcttcctcttcttcctcctcctcctcttct
tgttcccactctcgatcaggttctagttcttcttcatcctcatcttgttcttcggcatca
tcttcttcttcctcttcctcctcctcctcatcatcctcttcatcttcgtccgaagagagt
gacagtgaagaagaggaaatccaaaagcgagaaggtacccctcacatgaaagcctatgat
gaagaaagtgttgcatcactgagcactacacaggatgagactcaggatagtttccagatg
aacaatgggacaccagagtctgcttacatcttacaaggtggctatatgctggcagcatcg
tattggccaaaggatcgcgtgatgatcaaccggttggacagtatttgtcaaacagttctg
aaagggaagtggccttcagctagaagaagttatgatgctaatacagtggcctctttctat
accacaaaactgctggacagccctggagcagctacagaatatagcgagcccagtgtaccc
actcccccaggtgcaggtgttaaagaagaacatgatcagtcaccacagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaaa
ttgacatttcagaagcaaggacttgctcagaagagatcatttgatactgaagatggtgct
ctggggcagcaacagtacctcacacgccttcgggagcttcaaagcgcatcagagaccagc
cttgtcaattttccaagatgcccaccagtatcaggtacttccattcaatcagctcttggt
gccaatggagtgatactagacaaccagcctatagtcaaaaaaaggcgaggaaggaggagg
aatgtagaaggtgttgacatcctcttttttaacagaaacaaaccacctaatcacgttact
ataggcataaccacctcacaggtttctacagggataagtccagctctttcctatactcaa
cctcaaggaatacctgatacggagagtccagttccagttattaaccttaaagatgggacg
agacttgcaggtgatgatgcaccgaagagaaaagatttggaaaaatggcttaaggagcac
ccgggttatgtggaagatttaggagcatttattcctagaatgcagcttcatgaaggaagg
ccgaaacagaaaaggcaccgttgcagaaaccccaataaattagatgttaatagtctcact
ggagaagaacgtgttcagctgattaacagaagaaatgctagaaaggttggaggtgcattt
gctcccccactgaaagatttatgtcgattcctgaaagaaaattcagaatatggagtagct
cctgaatggggagatgtggttaagcaatctggatttcttccagaaagtatgtatgaacgt
attctcactggtcctgtcgtaagagaggaagtaagcaggcgaggaagacggcctaaaagt
gggatttccaaggctgctgcagcggcggcagcagctgcaaacgtgacaagtgtttcaggc
agtcctttgttagccaatggattacttccaggtgtggatctgacaactcttcaggcctta
caacaaaacctgcaaaatttgcagtcactacaagtaactgcagggctgatgggaatgcct
gctagcctgtcttctggaggagaagctaaaaacatggccaccatgttccccatgctgctg
tcaggaatggctggattaccaaatctgctgggcatgggaggactcctgacaaagcctgcg
gaatctgggacagaagagaaaaagggaaatgactctaaggagctagaaggaaaaaaagaa
aggacagagagccaaaattcagagaatggtggagaaaactcagtgtcaggttctccttct
acgtcctcttctgctgcattaaatacagctgcagctgccaacccattagctattaaccca
ctgttactatctaatatactttatccagggatgcttctcactccaggccttaatcttcat
attccaactttgtcccagtccaatacttttgatgtacagaaaaacaaaaacaatgactta
ggctcgtcaaagtctgtagaagtaaaggaagaagattccagaggcagagatcaggaagac
aaagggggaactgagctgagtcctctcaatgaaaacagcacagatgagggttcagagaaa
gccgacgcttcatctggatctgatagtacgtcatcatcctccgaggactcagattctagt
aatgaagactga
DBGET
integrated database retrieval system
