Loxodonta africana (African savanna elephant): 100660769
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Entry
100660769 CDS
T04351
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X3
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03082
ATP-dependent chromatin remodeling
lav04714
Thermogenesis
lav05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100660769 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100660769 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100660769 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100660769 (SMARCC1)
03036 Chromosome and associated proteins [BR:
lav03036
]
100660769 (SMARCC1)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100660769 (SMARCC1)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100660769 (SMARCC1)
PBAF complex
100660769 (SMARCC1)
GBAF(ncBAF) complex
100660769 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
100660769
NCBI-ProteinID:
XP_003409733
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MAAAAGGGGPGSAAGSAGAGGTAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
VLGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDPKL
ANKLKDIIKRHQGTYTEEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSSDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKAAANARKRKHSPSPPPPTPAESRKKSGKKGQASLYGKRRNQKE
EEEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPSKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQDAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
VETDTDGQQPEKTENKGENEMNDGDKAQDGENEKNSEKEQDSELNDGIKSEEKEAEENKE
LTDTCKERESDIGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGS
MMPGQPMSGRMISTIAANIHPSGSGPTPPGMPPMPGSILGPRVPLTAPNGMYPPPQQPPP
PPPTDGVPPPPAPGPPASAAP
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggtggagggccggggtcggcagcgggcagcgcgggcgcgggt
ggcacggcggcagctgcgggcctggccgtttatcggcggaaggacgggggcccggccagc
aagttttgggagagcccggagacggtgtcccagctggactcggtgcgggtctggctgggc
aagcactacaagaagtatgttcacgctgatgctcctaccaataaaaccctggctgggctg
gtggtacagcttcttcagttccaggaagacgcctttgggaagcatgtcaccaatccggcc
ttcaccaaactccctgcaaaatgcttcatggatttcaaagctggaggcactttgtgtcat
gttcttggggctgcttacaagtataagaacgaacagggatggcggagatttgacctacag
aatccatcccgaatggatcgaaatgttgaaatgtttatgaacattgaaaaaacattggtg
cagaacaattgtctgaccagacctaacatctacctcattccagacatcgatccgaagttg
gctaacaaattgaaagatatcatcaaacgacatcagggaacgtatactgaagagaagtca
aaagcttcccaccacatatatccatatccttcctcacaagaggatgaagagtggttgaga
ccggtgatgagaaaagataagcaggtgctagtacactggggcttttatccagacagctat
gatacttgggtccacagcagcgatgttgatgctgaaatagaagatccaccgattccagaa
aaaccttggaaggttcatgcgaaatggattctggacactgatgttttcaatgaatggatg
aatgaagaggattatgaggtggatgagaacaggaagcccgtgagttttcggcagcgaatt
tcaacaaagaatgaagagccagtccgaagtccagagagaagagatagaaaagcggcggct
aatgctcgaaaaaggaaacattcaccttccccaccccctcccacacctgcagaatcgagg
aagaagagtgggaaaaaaggccaagccagtctttatgggaagcgcagaaatcagaaagag
gaagaagagcaagaagatcttaccaaggacatggaagacccaacacctgtacccaacata
gaggaggtggtacttcccaaaaatgtaaacccaaagaaagatagtgaaaatacacctgtg
aaaggaggaactgttgcagacctagatgaacaagatgaagaaacagtcacgacaggagga
aaggaagatgaagatcctagcaaaggtgatcagagtcggtcagttgaccctggtgaagat
aatgtaacagagcagaccaatcacattattattcccagctatgcatcatggtttgattat
aactgtattcacgtgattgaacggcgtgctcttcctgagtttttcaatggaaaaaacaaa
tccaagactccagaaatatacctggcatatcggaattttatgattgatacctatcgcctg
aatccccaagagtatttaaccagcactgcttgtcggaggaacttgaccggagacgtatgt
gccgtgatgagggttcatgcctttttagagcagtgggggctcgttaattaccaagtggat
cctgaaagtcgacccatggcaatgggacctcctcctactcctcatttcaatgtattagct
gataccccctctgggcttgtgccgcttcaccttcgatcacctcaggtccctgctgctcag
cagatgttaaattttcctgaaaagaacaaggaaaaaccaattgatttgcagaactttggg
cttcgtactgacatttactctaagaaaaccttagcaaagagtaaaggtgctagtgctgga
agagaatggactgaacaggaaacccttctgctcctggaggccctggagatgtacaaggat
gactggaacaaggtgtcagaacatgttggaagtcgtactcaagatgaatgcatcctccac
tttctgaggcttcccattgaggacccgtaccttgagaactcagatgcttcccttgggcct
ctggcctaccagcctgtccccttcagtcagtcaggaaacccagtcatgagcactgttgct
ttcttggcatctgtggtggacccacgtgtggcatctgctgcagcaaaagcagctttggag
gagttttctcgggttcgggaggaggtaccattggaattggttgaagctcacgtcaaaaaa
gtacaagacgcagcacgagcctctgggaaagtagatcccacctatggtctggagagcagc
tgcattgcaggcacagggcctgatgagccagagaagcttgaaggagctgaagaggaaaaa
gtggaaacagacactgatggtcagcagcctgaaaagacagaaaacaaaggcgaaaatgaa
atgaatgacggcgataaagcacaagatggagagaatgaaaaaaatagtgagaaagaacag
gatagtgaacttaatgatggtattaaatcagaagaaaaggaggctgaagagaacaaggaa
ctcactgatacatgtaaagaaagagagagtgatattgggaagaagaaagtagaacatgaa
atttctgaaggaaatgtagccacagccgcagcagctgctcttgcctcagctgccaccaaa
gccaagcatctggctgctgtggaagagagaaagatcaagtctctggtagccctcctggtt
gagacacaaatgaagaaactagagatcaaacttaggcattttgaagagctggaaacgatc
atggacagagagaaggaggctctagaacaacagaggcagcagttgcttacggaacgccag
aacttccacatggaacagcttaaatacgcagaattacgagccagacagcaaatggaacag
cagcagcatgggcaaaaccctcagcaggcacaccagcattcaggaggacctggcctggcc
ccacttggagcagcagggcaccccggcatgatgcctcatcagcagccacctccctaccct
ctgatgcaccaccagatgccaccgcctcatccaccccagccaggtcagataccaggttcc
atgatgcctgggcagcccatgtcaggccgcatgatttccaccattgcagccaacatccac
ccctctggaagtggccctacacctcctggtatgcctccaatgccaggaagcatcttagga
ccacgggtgcccctcacagcacctaatggcatgtatcctccaccacagcagccgccgccg
ccaccacccacagatggggttcctccacctcctgctcccggcccaccagcctcagctgct
ccctag
DBGET
integrated database retrieval system
