Loxodonta africana (African savanna elephant): 100660804
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Entry
100660804 CDS
T04351
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100660804 (HFM1)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100660804 (HFM1)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100660804 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
Hfq
AAA_22
Ig_GP210_16th
Motif
Other DBs
NCBI-GeneID:
100660804
NCBI-ProteinID:
XP_010596427
LinkDB
All DBs
Position
Unknown
AA seq
1423 aa
AA seq
DB search
MLKSNDCLFSLDNLFFEKPDETENSPGNEKSLDWFLPPAPLISEIPNTQMLEEEIESHKL
LGQEKRPKKLTSNLKTTNEDIRYISPMQNLEFAFSFDKYEEDNLHVRGAGNSDLPHVTGK
LTYGSSQKYKNHIGSEIAPEKNVPDDTNLINFADDKGESTPAFRKRLFKIPDSIHGSAIL
DSHIDSVNIVRAEMNKEKSWNCSSSKQKQQYSDINLFTASDAFSASGIRGGTFKAPSFSV
PSQFHAIQGVTEKDLGSLKAVTEIPAKFRRIFKEFPYFNYIQSKAFDDLLYTDRNFVICA
PTGSGKTVVFELAIIRLLMEVPLPWLNIKIVYMAPIKALCSQRFDDWKEKFGPLGLKCKE
LTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFFIDEVHIVKDENRGP
ILEVVVSRMKTVQSLPQTLENTSTIIPMRFVAVSATIPNVEDIAEWLSDGERPAVYLKID
ESHRPVKLRKVVLGFPCSNNQTEFKFDLTLNYKIASVIQTYSDQKPTLVFCATRKGVQQA
ASVLVKDAKFIMTMEQKQRLQKCAHSIRDSKLRDIVIHGVAYYHAGMELSDRKVVEGAFA
VGDLPVLFTTSTLAMGVNLPAHLVIIKSTMHYAGGMFEEYSETDILQMIGRAGRPQFDST
ATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRSTL
LYIRALKNPSHYGFSCGLNKDGIEAKLQELCLKNLNDLSSLNLIKMDEDVNFKPTEIGRL
MAWYYITFETVKKFCTISGKETLSDLVTMIASCQEFLDIQLRINEKKTLNTLNKDPHRVT
IRFPMEGKIKTREMKVNCLIQAHLGCIPIQDFALTQDTAKIFRNGSRITRWLSDVLAAQE
KNFAALLNSLILAKCFRCKLWENSLHVSKQLEKIGITLSNAMVNAGLTSFKKIEETDARE
LELILNRHPPFGTQIKETVMHLPKYELKVEQVARYSDTTAEILVTIMLRNFEQLQTKRTA
PDSHYVTLIIGDADNQVVFKHKILDSVLLKAGNWTKKIDVKRTHKSEDLSINLISSEYVG
LDIQQKFTVFYLGPKRFGNEIIMQRKSETEISHSKHSDRSVAGLSKGTTAYKKLGNRECN
HHCKNKHTCGHDCCKVGVAQKSGVKEPTISSYLSDLRNRNAVSSLPPVKRLKLQMNKSQS
VNLKEFGFTPKSSLPGISRSEYSNILELPINFASGNQNLTDVAKSNSSFSEVLNVNFELG
NEVWDDFDDENLIEATSFSTETDKTDTSGFGNTLSSSTRGHKLTLQESKSQFQREMSKSF
VSANEEPVISNFSASSMTKLPQQAGSTNTVCLQENKQQSLSPEIKRLYFPHSENKSNSSN
FAEKVDYFIRNSECKKGIDFSRYHPDDAADEMKSFLGIFDGIF
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtcaaatgactgcttgttttctttggacaatttgtttttcgaaaaaccagat
gaaactgaaaactctccaggcaatgaaaaatcattggattggtttctcccacctgctcca
ttgatttcagaaattccaaatactcagatgctagaggaggaaatagaaagccataaactg
ttaggtcaggaaaagagaccaaaaaagttaacatcaaatttaaagacaactaatgaagac
atacgttatatttcaccaatgcaaaacctcgaatttgccttctcctttgataaatatgaa
gaagataatctacatgtaagaggggcaggtaacagtgacttaccacacgttactggcaag
ttgacatatggttcttctcagaaatacaaaaatcacattggcagtgaaatagcacctgag
aaaaatgtccctgatgacacaaacttaattaactttgcagatgataaaggagagagcaca
ccagcattccgaaaaagattatttaaaatacctgacagcatacatgggagtgcaattttg
gattctcacattgactcagtgaacattgtccgagcagaaatgaataaagaaaagtcatgg
aactgtagcagtagtaagcagaaacagcagtattcagacattaacctgtttacagcaagc
gatgctttttctgcttctggaatcagaggaggcacattcaaagcaccgtctttttcagtt
ccatctcaatttcatgctattcaaggcgtgactgaaaaagatttaggttcgttgaaggct
gttacagaaatcccggcaaaatttagacgtattttcaaagaattcccatatttcaactat
atacagtccaaggcctttgatgatcttctttacacagataggaatttcgtgatttgtgct
ccgactggttctgggaaaactgtagtgtttgaactagctataataagattgctaatggaa
gtcccattgccatggttgaacattaaaattgtttacatggcaccgataaaagccctgtgt
agccagcgttttgatgactggaaagaaaaatttggaccgctaggactgaaatgtaaagag
ctcacaggagataccgtcatggatgatctttttgagattcagcatgcccatattattatg
acaactccagaaaaatgggatagcatgactaggaaatggagagacaactctttggtccaa
ctggttcgactttttttcattgatgaggtacacattgtgaaagatgaaaatcgtggtccc
attcttgaagttgtagtcagcagaatgaaaactgtacagtcgttacctcagactttagaa
aacaccagcactattattccaatgagatttgtagctgtatctgcaacaattccaaatgtt
gaagatattgcagaatggctttccgatggtgagagacctgctgtatatctgaaaatagat
gagagccacagaccagtgaaacttcgaaaagtggtccttggatttccctgcagtaataac
caaactgagtttaagtttgacttaaccctcaattacaaaatcgccagtgttatacaaaca
tactctgatcagaaacccacacttgtgttttgtgcaacaaggaaaggtgtgcaacaggct
gcttctgttcttgtgaaagatgctaaatttattatgactatggaacagaaacagaggcta
cagaagtgtgcacattccataagggattcaaaactgagagatattgtcatacatggtgtt
gcttattatcatgctggtatggagctgtcagatagaaaagtagttgaaggagcttttgct
gttggagatctgcctgttctttttactaccagtactttagctatgggagtaaatttgcct
gctcatctagtaattataaaatctacaatgcattatgctggaggaatgtttgaagaatac
agtgaaacagatattctacagatgattggtagagctggtcgacctcaatttgacagtaca
gctactgcagttattatgactcgattaagtacaaaagaaaagtacattcagatgttagct
tgtagtgacacggtagaaagcagtttgcatagacatcttattgaacatttaaatgcagag
atagtattgcatactatcacagatgtgaacattgctttggaatggatacgatcaaccttg
ctttatataagagccttgaaaaatccatctcattatggtttttcatgtggattgaacaaa
gatggaattgaagcaaaattacaagaattatgtttgaagaatttgaatgatttatcatct
ctaaatttgataaagatggatgaagatgttaatttcaaaccaactgagatcggaagattg
atggcttggtattatattacatttgagacggtgaagaaattttgtacaatcagtggaaaa
gaaactttatcagatctggtcacaatgatagccagctgccaagaatttctagatatccag
ttaagaataaatgaaaagaaaacactgaatactttgaacaaagatccacatcgggtaact
atcagatttccaatggaaggaaaaattaaaacaagggaaatgaaagtaaattgtcttatt
caggctcacctaggatgcatccccatacaagactttgctttgacacaagatacagcgaag
attttcagaaatggctcacgaattacaagatggttgtcagatgttttggctgctcaagaa
aagaattttgctgcactgttgaacagtttgattttagctaagtgttttaggtgtaaactt
tgggaaaactctctgcatgtatccaaacagttggaaaaaattggtataacattgtcaaat
gcaatggtaaatgcaggtttgacttcctttaaaaaaatagaagaaacagatgcaagggaa
cttgaactgattttaaataggcatcccccttttggaacccagataaaagaaactgtgatg
catctaccgaaatacgaacttaaagtggaacaggttgcaagatatagtgatacaacagca
gaaatattagttaccattatgttaagaaactttgaacagctacaaactaaaagaacagca
ccggattctcactatgttaccttgataataggtgatgcagataatcaagtggtttttaaa
cacaaaattttggattctgttttgctaaaagctggaaattggaccaaaaagattgatgtg
aaaagaactcataaatctgaagatcttagcataaatctaattagttctgaatatgttgga
cttgatattcagcaaaaatttacagtcttttacttaggacccaagaggtttggaaatgaa
ataattatgcaaagaaaatcagaaacagagatttcccattctaaacattcagatagatct
gtagcaggactcagtaaaggaacgactgcctacaaaaaactgggaaaccgagaatgtaat
catcactgtaaaaataaacatacatgtggacatgactgctgtaaagttggagttgcacag
aagtcaggtgttaaagagccaacaatctcttcatatttatctgatttaagaaacaggaat
gccgtttcatctcttcctccagttaagcgtctcaagctgcagatgaataaatctcaaagt
gtgaaccttaaagagtttggttttactccaaaatcttcccttcccggtatatcaaggtca
gaatattcaaacatacttgaattgcctataaattttgcatctggaaaccaaaatttgaca
gatgtggctaaaagcaactcctcattttcagaagttttgaatgtgaactttgaattggga
aatgaagtttgggatgattttgatgatgaaaatttaatagaagcgactagcttttcaact
gaaactgacaagacagacacatcaggatttggaaacactttgagttcgagtaccagagga
cataagctaaccctccaagagtcaaagagccagttccaaagagaaatgtcaaaaagcttt
gtttcagcaaatgaggagccagttatttccaatttcagtgcatcctccatgacaaaatta
cctcagcaagctggaagtacaaatacggtctgtttacaagaaaataaacaacaaagtctt
tcaccagagattaaaagattatactttcctcactctgaaaataaatcaaattcttcaaat
tttgctgagaaagtggactattttattagaaacagtgaatgtaaaaagggaattgatttc
agtaggtatcatcctgatgatgcagctgatgaaatgaagtctttcctgggaatatttgat
ggcattttctaa
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