Loxodonta africana (African savanna elephant): 100660984
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Entry
100660984 CDS
T04351
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lav03037
]
100660984 (IFT88)
Cilium and associated proteins [BR:
lav03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100660984 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
TPR_14
TPR_16
ANAPC3
TPR_11
TPR_17
TPR_10
ARM_TT21_4th
TPR_CcmH_CycH
ARM_TT21_5th
ARM_TT21_N
TPR_21
TPR-S
ARM_TT21_C
HAT_PRP39_C
TPR_15
HEAT_Nup120
DUF6584
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
100660984
NCBI-ProteinID:
XP_010592238
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDTAFQQAVRTSHGRRPPITAKIPSTA
VTRPIATGYGSKTSLTSSVGRPLTGTIQDGVSRPMTAVRAAGFTKAALRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTAPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMS
MAPNLKAGFNLILSYFAVGDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLVIEAI
KNDHLRQMEHERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAVTYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
CFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDSRALSKLGELYDGE
GDKSQAFQYYYESYRYFPSNIGVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEIKEQRIKSGRNGSGGSRSKREGSAGSDSGQNCSASSKGERLSAKLRALPGTNEPYESS
SNKEIDASYVDPLGPQIERPKTAAKKRIDEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcacctggctccagagacagatgaagatgatctttattctggttac
aatgactacaatccaacctatgatactgaggaattggagaatgatacagcttttcagcaa
gctgtgagaactagtcatggcagaagacctccaataactgctaaaataccaagcacggca
gttactagacccatagctactggatatgggtccaagacatctctgacatcatcagtggga
agaccattgacaggaactatccaggatggagttagtagacctatgacagcagtgagagca
gctggttttaccaaagcagctttgagaggttctgcatttgacccccttggtcagtcaagg
ggccctgcgcctcctttggaagccaaaaacgaagatagcccagaagaaaagattagacaa
ttagagaagaaagtaaatgagttggtagaagaaagctgtattgccaacagttgtggagac
ttaaaattggccttagaaaaggcaaaagatgctggaagaaaagagagagtactagtaaga
caacgagaacaggttacagctccagaaaatatcaatttggacttgacttattcggttctt
ttcaatttggccagccagtattcagctaatgaaatgtatgccgaagcactaaacacgtat
caagtgatagtgaaaaataagatgtttagcaatgcaggaagattgaaagtgaatatggga
aatatttatttaaagcaaagaaattactccaaagccattaaattctaccggatggcatta
gatcaaattccaagtgtccataaagaaatgaggattaaaataatgcagaacattggagtt
acgtttatcaaaactggtcaatattcagatgcaattaattcgtttgagcacataatgagt
atggcgccaaatctgaaggcaggcttcaacctaattcttagttattttgctgttggagac
cgtgaaaaaatgaagaaggcattccaaaaattgattgctgttcctttagaaattgatgaa
gatgataaatacatttcaccaagtgatgatccccatactaacttagtgattgaagctata
aaaaatgatcatctaaggcaaatggaacatgagaggaaagccatggcagaaaaatacatc
atgacagctgcaaaactcattgctcctgtaatagaaacatcttttgccgtgggttatgat
tggtgtgttgaagttgtgaaagcttctcaatatgtagagctagcaaatgatctggaaata
aataaagcagttacatacttgagacaaaaggattttaaccaagctgtagagaccttaaaa
atgtttgaaaagaaagacagtagagtgaaaagtgctgctgcaaccaacctttcattcctg
tattatttagaaaatgaatttgcacaagccagcagctatgctgatttagctgtgaactct
gatagatacaatccatcagctcttacaaataaaggaaatacagtttttgcaaatggtgat
tatgagaaggctgctgaattctataaggaggctctgagaaatgattcttcttgtacagaa
gcactttataatattggccttacctataagaagctaaaccggctagatgaggctttggat
tgtttcctgaaacttcacgcaatcctacgaaacagtgcccaagttctttaccagatagca
aatgtatatgaattaatggaggatccaaatcaagctattgaatggctgatgcaactgatc
agtgttgttccaactgattctagagctttgtctaaactaggagaattatatgatggtgaa
ggagataaatcccaagcttttcagtattactatgagtcatataggtatttcccttctaac
attggggtcattgagtggctaggagcctattacattgacacacagttttgtgaaaaagcc
attcagtactttgaaagagcttctcttatccagcctacacaagtgaaatggcagctgatg
gtagctagttgtttcagaagaagtggtaactatcaaaaagcattagatacttataaagat
attcacagaaaatttccagaaaatgttgaatgtttgcgtttcttggttcgtctctgcaca
gatatcggattaaaagaagttcaagaatacgcaacaaaactcaagagattggaaaaaatg
aaagaaataaaggaacagcgcataaaatctggcagaaatggcagtggaggttcccgtagc
aaaagagagggaagtgctggcagtgatagtggccagaactgtagtgccagtagtaaaggt
gaacgactaagtgccaaactaagagctttacctgggacaaatgaaccttatgaaagtagc
agtaacaaagaaatagatgcctcttatgtggatccacttggccctcaaatagaaagacca
aaaactgcagccaaaaaaaggattgacgaggatgattttgctgatgaagagttaggagat
gatttgcttccggaataa
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