Loxodonta africana (African savanna elephant): 100661458
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Entry
100661458 CDS
T04351
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03030
DNA replication
lav03420
Nucleotide excision repair
lav03430
Mismatch repair
lav03440
Homologous recombination
lav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100661458 (RPA1)
03420 Nucleotide excision repair
100661458 (RPA1)
03430 Mismatch repair
100661458 (RPA1)
03440 Homologous recombination
100661458 (RPA1)
03460 Fanconi anemia pathway
100661458 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lav03000
]
100661458 (RPA1)
03032 DNA replication proteins [BR:
lav03032
]
100661458 (RPA1)
03400 DNA repair and recombination proteins [BR:
lav03400
]
100661458 (RPA1)
Transcription factors [BR:
lav03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100661458 (RPA1)
DNA replication proteins [BR:
lav03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100661458 (RPA1)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100661458 (RPA1)
MMR (mismatch excision repair)
100661458 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
100661458 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
100661458
NCBI-ProteinID:
XP_003416864
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGVNTLSSFMLAT
QLNPLVEEERLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSAEAVGLKIGNPVPYNE
GHGQQQVVPTPASAASPPTSKPQQQNGSSGMGSIVSKAYGAPKTFGKAGGTSLVNTAGGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTMQF
DFTGIDDLENKSKDSLVDIIGVCKSYEDATKIVVKSNNREVSKRNIYLMDMSGKVVSATL
WGEDADKFDGTRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGIGGSNTNWKTLYEVKSENLGQGDKADYFSCVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILAANIADFLENQWVTCFQESAEAIL
GQSAAYLGELKEKNEQAFEEVFQNASFRSFTFRIRIKLETYNDESRIKASVVDVKPVDYR
EYGRRLIVSIRKNATQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccatctgagcgagggggccattgcggccataatgcaacagggagatacgtcc
ataaaacctatcctccaagtcattaacatccgtcccattactacagggaatagtccaccc
cgttatcgactgctgatgagtgatggagtgaacactctatcctctttcatgttggcaaca
caattgaaccctcttgttgaggaagaacggttgtccagcaactgtatttgccagattaac
cgatttattgtgaacacactgaaagatggaaggagagtagttattttgatggagttagaa
gttttgaaatcagcagaagcagttggattaaagattggcaatccagtgccctataatgaa
ggccatgggcagcagcaggtagttcctaccccagcctcagcagccagtccaccaaccagc
aaaccccagcaacagaatgggagttcaggaatgggttccattgtatcgaaggcttatggt
gccccaaagacatttggaaaagctggaggcaccagcctggtgaacacagctgggggaaca
cagtccaaagtggtacccattgccagcctcaccccttaccagtccaagtggaccatttgc
gctcgtgtcaccaacaaaagtcagatccgtacctggagcaactctcgaggagaaggaaag
cttttctctatagaactggttgatgaaagtggtgaaatccgagctacggctttcaacgag
caagcagacaagttctttccccttatcgaagtgaacaaggtctattatttctcaaaaggc
accctgaagattgctaacaaacaattcacagctgttaaaaatgactatgagatgaccttc
aataatgagacttccgtcatgccctgtgaagatggtcatcatttacctacaatgcagttt
gacttcacagggattgatgacctagagaacaagtccaaagactcgctcgtagacataatt
ggagtctgcaagagctatgaagatgccacaaaaatcgtagtgaagtctaacaacagagaa
gtttctaagagaaatatctatttgatggacatgtcggggaaggtggtatctgcaactcta
tggggagaagatgctgataaatttgatggtactagacagcccgtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcactgtcatt
gtgaatcctgatatcccagaggcctacaagcttcgtggatggtttgactcagaaggacaa
gccttagatggtgtttccatctctgacctaaagagtggagggataggagggagcaacacc
aactggaaaactttgtatgaggtcaaatcagagaacctgggccagggtgacaaggcggac
tatttcagctgtgtggcgacagtggtgtatcttcgcaaggagaactgtatgtaccaggcc
tgcccaactcaggactgcaataagaaagtgattgatcagcagaacggattataccgctgt
gagaagtgtgacagcgaatttcccaatttcaagtaccgcatgatcctggcagcaaatatt
gcagattttctagagaatcagtgggtcacttgtttccaggagtctgcagaggccatcctc
ggacaaagcgcggcttacctgggagaattaaaagagaagaatgaacaagcatttgaggaa
gttttccagaatgccagctttcgatcttttacattcaggatcagaatcaaactagagacc
tacaatgacgagtcccgaattaaggcctctgtggtggacgtgaagcctgtggactacaga
gaatacggcagaagactaatcgtgagcatcaggaagaatgccacgcagtaa
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integrated database retrieval system
