Loxodonta africana (African savanna elephant): 100661890
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Entry
100661890 CDS
T04351
Symbol
CNOT3
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100661890 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100661890 (CNOT3)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100661890 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100661890 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
100661890
NCBI-ProteinID:
XP_023399866
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHV
RMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQYPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEVFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKPVHSNQHPQSPAVPPSYSSGPPPATSALSTTPGNNGAPAPAAPSSAMGSKASPA
PSHNSGTPAPYAQAVAPPAPSGPSTAQPRPPSVQPGGGGGGGGGGGGSSSSNNSSGAGGA
GKQNGATSYSSVVADSPAEVALSSSGGSSTNNQALGPPPGPHNPPPSTSKEPSVAAPPGA
GGVAPGSGNNAGGPSLLVPLPVNPSSSPTPSFSEAKAAGALLNGPPQFSTXPEIKAPEPL
SSLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVC
PLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPTHRSSPPDAPSTL
LPQGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRK
KEGFTFEYRYLEDRDLQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaggatatttggcagaagctccacaatgcagccaacgcgaatcag
aaagaaaagtatgaggctgatctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatccaacgagatcaaggataagaggcagcttatagacaac
cgcaagcttattgagacgcaaatggaacggttcaaggtggtggaacgagagaccaaaacc
aaagcttacagcaaggagggcctgggtctggcccaaaaggtggaccctgcccagaaggag
aaggaagaggttggccagtggctcacgaacaccatcgacaccctgaatatgcaggtggac
cagtttgagagtgaggtggagtccctgtcggtgcagacacgcaagaagaagggcgacaag
gataagcaggaccggattgagggcttgaagcggcacatcgagaagcaccgctatcacgtg
cgcatgctggagaccatcctgcgcatgctagacaatgattccatcctcgtcgacgccatc
cgcaagatcaaggacgatgtcgagtactacgtcgactcctcccagtaccccgacttcgag
gagaacgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtcgcc
acctccccacccagccacagccacatggaggatgaggtcttcaaccagtcgagcagcaca
cctacttccaccacctccagctcgcctatcccgcccagcccagccaactgcaccacggaa
aactccgaggacgacaagaagaggggccgatcaacagatagtgaggtcagccagtctcca
gccaaaaatggctccaagcctgtacacagcaaccagcaccctcagtccccagctgtgcca
ccaagctactcctccggccccccgcctgccacttctgccctgagcaccacccctggcaac
aacggggcccccgccccagcagcaccctcaagtgccatgggatccaaggccagtccagct
cccagccacaactcgggcactcctgctccctatgcccaggctgtggctccaccagccccc
agtgggcccagcacagcccagccccggccccccagtgtccagcctggcgggggaggtggt
ggtggaggaggaggaggcgggagcagcagcagcaataacagcagtggagctggaggtgct
ggcaagcagaacggtgccaccagctacagttccgtggtggcagatagcccagcagaggtg
gctctgagcagcagtgggggcagcagcaccaacaaccaggctttgggtcccccgcccggc
ccccacaacccacctcccagcacctcaaaggaacccagtgtggcagctccaccaggggct
ggtggtgtggccccaggctcagggaacaacgccgggggacccagcctcttggtgccacta
cctgtgaatccctccagctccccgacgcccagcttcagtgaggccaaggcagcgggggcc
ctactcaatgggcccccgcagttcagcacangcccggagatcaaggcccctgagcctctg
agctccttgaagtccatggcggagcgggcggctattagctccggcattgaggaccctgtg
ccaacgctgcacctgacagagcgagacatcatcctgagcagtacgtcggccccaccagcc
tcggcccagccacccctgcagctgtcagaggtgaacatcccactgtccctgggcgtgtgt
cccttggggcctgtgcccctcaccaaggagcagctctaccagcaggccatggaagaggcc
gcctggcaccacatgccccacccttctgactccgagcgcatccggcagtacctgccccgg
aacccatgtccgacgccccctacacacagatcatcgccccctgatgccccctccactctt
cttccccagggcactaaggcgcagtacctggcagccaaggccctaaagaagcagtcctgg
cgattccacaccaagtatatgatgtggttccagcggcacgaggagcccaagaccattacc
gacgagtttgaacagggcacctacatctacttcgactacgagaagtggggccagcggaag
aaggaaggcttcaccttcgagtaccgctacctggaggaccgggacctccagtga
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integrated database retrieval system
