Loxodonta africana (African savanna elephant): 100662044
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Entry
100662044 CDS
T04351
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X2
KO
K13174
THO complex subunit 5
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100662044 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
100662044 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100662044 (THOC5)
03041 Spliceosome [BR:
lav03041
]
100662044 (THOC5)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100662044 (THOC5)
Spliceosome [BR:
lav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100662044 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
100662044
NCBI-ProteinID:
XP_003419127
UniProt:
G3SWC1
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDMAVEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPVISKPEVTM
GDPHQQTLARLDWELEQRKRLAEKYRESLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
HLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSASHMETTMKLLK
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYMELHFTKDIV
EAGLAEDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNNNDDNIRA
MESEVNVCYKELCGARPGYQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
LFRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcaagcaaaaaacggaagcccaaagtgatccgaagtgatggagcccca
gctgaagggaagcgaaatagatctgatactgagcaggaaggtaaatactacagtgaggag
gcggaggtggacctgcgggaccctggcagagactatgagctgtacaagtacacgtgccag
gagctacagaggctcatggctgagatccaggacctgaagagcaggggaggcaaggacatg
gcagttgagatcgaagaacggcggatccagagctgtgtacatttcatgactctcaagaag
cttaaccggttagctcacatcaggttgaagaaaggaagagatcagacccacgaggcaaag
cagaaagtagatgcctatcacctgcagttgcagaacctgttgtatgaggtgatgcacctt
cagaaggaaatcaccaaatgcctggaatttaagtcaaagcatgaagaaattgatctggtc
agtttagaggagttttataaggaggctcctccagttatcagcaagcctgaagtcaccatg
ggagatcctcaccagcaaacccttgcacgtctggactgggagctggagcagcggaaaagg
ctggcagagaagtacagagagagtctgtccaacaaggagaagatcctcaaggagattgag
gtgaagaaggagtacctgagcagcctccagcctcgcctcaacagcatcatgcaggcatcc
ctcccggtgcaggagtacctgttcatgccattcgaccaggcccacaagcaatacgagaca
gccagacatctgccacctcctctctacgttctctttgtacaggccactgcgtatgggcag
gcctgtgataaaacattgtctgtggcgatcgaaggcagtgtggacgaagccaaggccctg
ttcaagcctcccgaggactcccaagatgacgagagtgactcagatgctgaggaggagcag
accacgaaacgccggcgacccacgctgggagttcaactggatgacaagcgcaaagagatg
ttgaagagacacccgctgtctgtcatgctcgacctgaagtgcaaagatgacagtgtgctt
cacctgaccttctactacctcatgaacctcaacatcatgaccgtaaaagccaaagtgaca
actgcaacggagctcatcacccccatcagtgccggtgacttgctgtctcctgactcagtc
ctaagctgtttgtatcctggggatcatggaaagaaaacaccgaatccagccaatcagtat
cagtttgataaagttggcatcctgactttgagagactatgtgcttgacctgggtcacccc
tacctgtgggttcagaagctgggtggcctccacttccccaaagagcaaccacagcatacg
gtgatcgcagaccactcactgagtgccagccacatggagaccaccatgaaactgctgaag
accagggtgcagtctcgcctggccctccataagcagtttgcatcccttgaacatggcatt
gtgccagttaccagcgattgccagtacctcttccctgcaaaggtggtctctcgcctggtg
aagtgggtgacgattgcccatgaggattacatggagctgcatttcaccaaagacattgtg
gaggcgggactagctgaggacaccaatctctactacatggccctcatcgaaaggggcaca
gccaagctccaggccgccgtggtgctgaaccccggctactcctccatcccacctgttttc
cagctctgtctaaactggaagggggagaaaaccaacaacaatgatgacaacattcgggcc
atggagagcgaggtcaacgtgtgctataaggagctgtgcggtgcccggcctggctaccag
ctcttgaccaaccagttgcagcgcctgtgcgtgctgctagatgtctatctggagactgag
agccatgatgacagtgtggaggggcccaaggagtttccccaggagaagatgtgtctgcgg
cttttcaggggtccaagtaggatgaaaccgtttaaatataaccatcctcaaggattcttc
agccatcgctga
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integrated database retrieval system
