KEGG   Loxodonta africana (African savanna elephant): 100662169
Entry
100662169         CDS       T04351                                 
Symbol
XRCC1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100662169 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lav03400]
    100662169 (XRCC1)
DNA repair and recombination proteins [BR:lav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100662169 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 100662169
NCBI-ProteinID: XP_003406274
LinkDB
Position
Unknown
AA seq 631 aa
MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGGGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVRAT
AEKRWDRVKIVCSQPYSKDSPYGLSFVRFHSPPDKDEAEASSQKVTKLGQFRVKEEDEGG
NSLRPGALFFSRVNKTSPATASDQAGPSYAAVTLQASSPAASAPLASRGVGSTTKPQESP
KGKRKLDLNQEEQKNPSKPSAQPSPPVLKRPKLPTPARTPATAPVPAPGQRAEPEKSPRE
GTELKGPQSGPQELGKILHGAVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLIC
AFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPGSSSEDEGDSHSATSG
DEAPRLSHKRPQTKTKPPQAAGPSSPQRSPAPEEAKPATPGAQENSDTEGERSEGQDNGA
EDAGDTEDELRRVAKQRQQRQPAGQEENGEDPYAGSTDENTDNEEHPESPTLPVPELPDF
FQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSNRVQFVITAQEWDPSFEEALMDNP
SLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgccggagatccgcctccgtcatgtcgtgtcctgcagcagccaggactcgacccactgt
gcagaaaaccttctcaaggcggacacttaccggaaatggcgggcagccaaggcaggcgag
aagaccatctctgtggtcctccagctggagaaggaggagcagatacacagcgtggacatc
gggaatgacggctccgccttcgtggaggtgctagtgggaagctcggccggagggggtgga
gagcaagactacgaggtccttctggtgacctcgtctttcatgtccccttctgagagccgc
agtggctcaaaccccaaccgcgttcgaattttcgggcctgacaagttggtccgggcaaca
gccgagaagcgctgggaccgtgtcaaaattgtttgcagccagccctacagcaaggactcc
ccgtacggcctgagttttgttcggtttcacagccccccagacaaagatgaggcagaggct
tcatcccagaaggtaaccaagctcggccagttccgagtgaaggaggaggacgagggtggc
aactccttgagaccaggggctcttttcttcagccgggtcaacaagacatccccagccaca
gccagtgaccaggcaggacccagctacgcagctgttacacttcaggcctctagccctgct
gcctcagcccccctggcttccaggggtgtaggtagtactaccaagcctcaggagtctccc
aaggggaagaggaagttggatttgaaccaagaagaacagaagaaccctagcaaaccatca
gcccagccctcaccacccgtgctcaagagacccaaactgccaactcccgcccgcacccca
gccacggctccagtccctgccccaggacagagggcagagccagagaagtccccaagagaa
ggcaccgagctcaagggaccccaatctggcccccaggagctgggcaagatccttcatggt
gcggtggtggtgctgagtggcttccagaaccccttccgctcagagctccgggacaaggct
ctagagctaggggccaagtatcggccagactggactccagacagcacccacctcatctgt
gcctttgccaacacccccaagtacagccaggtcctaggccttggcggccggattgtgcgt
aaggagtgggtgctggactgtcaccgcatgcgtcggcggctgccctcccggaggtacctc
atggcggggccaggctcaagcagcgaggatgagggggactctcacagtgccaccagtggg
gatgaagcccctaggctttctcacaagcgcccccagaccaaaaccaagccccctcaggca
gcaggacccagctcaccccagaggtccccagcccctgaagaggccaaaccagccacacca
ggggcccaggagaattctgacactgagggggaacggtcagaaggtcaggacaatggggca
gaagatgctggggacaccgaggacgagctgagaagggtggccaagcagaggcagcagagg
cagcccgcaggccaggaggaaaatggcgaggacccatacgcaggctccacagatgagaac
acagacaacgaggagcacccagagtctcctaccttgccagttcccgagcttccagacttc
ttccagggcaaacacttcttcctgtatggggagttccctggggatgagcgacggaagctc
attcgatacgtcacagccttcaacggggagcttgaggactatatgagcaaccgggtccag
tttgtgatcaccgcacaggagtgggaccccagctttgaggaggccctgatggacaacccc
tccctggcctttgtccgcccccgatggatctacagttgcaacgagaaacagaagctactt
ccccaccagctgtatggggtggtgccccaggcctga

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