Loxodonta africana (African savanna elephant): 100662285
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Entry
100662285 CDS
T04351
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lav03041
]
100662285 (DDX1)
03016 Transfer RNA biogenesis [BR:
lav03016
]
100662285 (DDX1)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100662285 (DDX1)
Spliceosome [BR:
lav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100662285 (DDX1)
Transfer RNA biogenesis [BR:
lav03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100662285 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
100662285
NCBI-ProteinID:
XP_010590231
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKATIKTGGSVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHIKFSKNGKDLGLAFEIPSHIKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKALESYVTKSQHTGSAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EVEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDVLAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagctgtggaagaaatg
gactggcttctcccaactgatatccaggcagaatctatccctttgatccttggaggaggt
gatgtacttatggctgcagaaacaggaagtggaaaaacaggtgctttcagtattccagtt
attcagatagtttatgaaactctgaaagatcaacaggaaggcaagaagggaaaggcaaca
attaaaactggtggttcagtgctgaacaaatggcaaatgaacccgtatgacagaggatct
gcttttgcaattgggtctgatggtctttgttgtcaaagcagagaagtgaaggaatggcat
ggatgtagagctactaaaggattaatgaaagggaaacactactatgaagtatcctgccat
gaccaaggattatgtagagttggctggtctacaatgcaggcttccttagacctaggtact
gacaagtttggatttggctttggtggaacgggaaagaaatcccataataaacagtttgat
aattatggagaggaattcactatgcatgataccattggatgttacctcgatatagataaa
ggacatatcaagttctccaaaaatggaaaagaccttggtctggcatttgaaataccatca
catataaagaaccaagccctctttcctgcctgtgttttgaagaatgctgaattaaaattc
aactttggtgaagaagaatttaagtttccgccaaaagatggttttgttgctctttccaaa
gcactggagagttacgttaccaaatcgcagcacacaggtagtgcacaggtggcacaaacg
aagttcctccccaacgctccaaaagctctcatcgtcgaaccctcccgggagttagctgaa
caaaccctgaataacgtcaagcagtttaagaaatacgttgataatcctaaattaagggag
cttctgataattggaggtgttgccgcccgggatcagctttctgttttggacaatggggta
gatatagttgtaggcaccccgggaagactagatgatttggtgtcaactggaaagctgaac
ttatctcaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggctat
tctgattttataaataggattcacagtcagattcctcagattacctctgatgggaaacga
cttcaggtgattgtttgctctgctactttgcattcttttgatgtaaagaagctgtctgag
aagattatgcactttcccacttgggttgatttaaaaggagaagattccgttcctgatacc
gtacatcatgttgttgtcccagtgaatcccaaaactgacagactctgggagaggcttgga
aaaaatcacattcgaactgacgaagtacacgcaaaagacaacactagacctggtgctaac
agtccagagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattatcttctgtagaaccaaaattgactgtgat
aacttggagcagtattttatgcaacaaggaggaggaccagataaaaaaggacaccagttc
tcctgtgtttgtcttcatggtgacagaaagcctcatgagagaaagcaaaacttggaaaga
tttaagaaaggagatgtaagattcttgatttgcacagatgtggctgctagaggaattgat
atccatggcgtgccttatgttataaatgtcaccctcccggatgaaaagcaaaactatgta
catcgaattggcagggtaggaagggctgaaaggatgggtctggccatttctctggtagcg
acagaaaaagagaaggtttggtaccatgtatgtagcagccgtggaaaggggtgttacaac
acaagactcaaggaggatggtggctgtacaatatggtacaatgagatgcagttgctatct
gaggtagaagaacacctgaactgtaccatttctcaggttgagccagatataaaggtccca
gtggatgaatttgatgggaaagttacctatggtcaaaaaagggccgctggtggtggaaac
tataaaggccatgtggatgttttggcacctacagttcaagagttggctgcccttgaaaag
gaggcacagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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