Loxodonta africana (African savanna elephant): 100662301
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Entry
100662301 CDS
T04351
Symbol
TAF5L
Name
(RefSeq) LOW QUALITY PROTEIN: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100662301 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100662301 (TAF5L)
03036 Chromosome and associated proteins [BR:
lav03036
]
100662301 (TAF5L)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100662301 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
100662301 (TAF5L)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100662301 (TAF5L)
STAGA complex
100662301 (TAF5L)
TFTC complex
100662301 (TAF5L)
SAGA complex
100662301 (TAF5L)
SLIK complex
100662301 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
ANAPC4_WD40
NBCH_WD40
RMC1_N
PROPPIN
Nbas_N
Motif
Other DBs
NCBI-GeneID:
100662301
NCBI-ProteinID:
XP_003415272
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MVMKRVRTEQIQTAVSCYLKRRQYADSEGLLKQGLRLSQTAEEMAANLTVQSESGCANIV
SAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVES
FYSRFHGMFLQNASQKDVIEQLQTTQTTQDILSNFRLRAFLDNKYVVRLQEDSYNYLIRY
LQSDNNTALCKVLSLHIHLDVQPAKRTDYQLYGSGSSSRGESSGLEPSDMPTPVLQNEAA
LGVLQESIRRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCVKLWSLR
SKKLKSEPHQVDVSRIHLACDILEEEPESKVHSRCSRMTALHLCALSSDTALAEMKILRG
HCGPVYRARFCQTAPGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFA
SGSYDRTARLWSFDRTYPLRIYAGHLADVDCVRFHPNSNYLATGSTDKTVRLWSAQQGNS
VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP
DSSLIASGSMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVT
GITQENQEH
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgaaacgagtgcgcacagagcagattcagacggcagtgtcctgctacctcaaa
cgccgacagtacgcggattcagaaggtctcctaaaacaaggattgcgactgtcacagact
gctgaagagatggcagctaacctcacagtccaatcagaatctggttgtgccaacatagtg
tctgcagccccttgccaggcagagccccagcaatacgaagtacagtttggacgactacgg
aattttctcactgattctgattcccagcacagccacgaagtgatgcctctcctctaccct
ctctttgtctacctccatctcaacctggtccagaacagcccgaagagcacagtggaaagt
ttctacagccgcttccatggaatgtttttacagaacgctagccagaaggatgtcattgag
cagctacagaccactcagaccacccaggacatcctgtctaacttcagacttcgagcattc
ctagacaacaagtacgtggtccgtctccaagaagacagctacaactaccttatccgctac
ctccagagcgacaacaacactgccctgtgcaaagtcctctccttacatattcaccttgat
gtgcagcctgccaagagaacagactaccagctctatggcagcggcagctcctcacgtggt
gagagcagcggcttagagcccagtgacatgcccacccctgttctgcagaatgaggccgcc
ctgggggtcttgcaggaaagcattcggcgagtcaaggatgggcctccctcacttactacc
atctgtttctatgccttctataacacagagcagctgctgaacactgcagaaatttcccca
gatagcaagctgcttgccgccggctttgacaactcctgtgtaaaactttggagtttacga
tccaagaagttaaagtcagaaccccaccaagtagacgtgtcccgcatccacttggcttgt
gatattctcgaggaggagcctgagagtaaggtccacagtcgttgctctcgaatgacagcc
ctgcatctctgtgccttgtcatctgatacagctttggctgaaatgaagatactgagagga
cattgtgggcctgtgtacagagcaaggttctgtcagacagctccagggttgctctcttgt
tctgaagacatgtccattagatactgggacctcggaagtttcaccaacactgtgttatac
caagggcatgcctaccctgtgtgggacctagacatcagcccctacagtctgtacttcgcc
agtggctcctacgatcgcactgcaaggctgtggtcatttgaccggacttacccactgaga
atatatgcagggcacctggcagacgttgactgtgtcagattccaccctaattctaactac
ttagctaccggctcaaccgacaagaccgtccgactgtggagtgctcagcaggggaactcc
gtgaggctcttcacgggccaccgagggcctgtgctttctcttgcattttctcccaacggt
aagtacctggcatccgctggcgaggaccagaggttgaagctgtgggacttggcgtctgga
accctttataaagagttgagaggccacacggacaacatcactagccttacattcagcccg
gacagcagcctgattgcctcgggctccatggacaactctgtacgcgtttgggacatcagg
aacacttactgcagtgctcctgctgacggctcctccagtgaactcgtgggcgtgtacacc
gggcagatgagtaatgtgctgagtgtacagtttatggcctgtaaccttcttttagtgacg
gggattacacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
