KEGG   Loxodonta africana (African savanna elephant): 100662398
Entry
100662398         CDS       T04351                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X2
  KO
K14308  nuclear pore complex protein Nup54
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03013  Nucleocytoplasmic transport
lav05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100662398 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100662398 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100662398 (NUP54)
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100662398 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 100662398
NCBI-ProteinID: XP_003414191
LinkDB
Position
Unknown
AA seq 508 aa
MAFNFGAPSGTSGTAAAPAAPSGGFGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKG
FGFGTGFGTTGTSTGLGTGLGTGLGFGGFNTQQQQQQQTTLGGLFGQPAQAPAQSNQLIH
TASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYS
CMPNNKDEDGLVVLVFNKKEADIRGQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTE
VVIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQN
PPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDIS
ELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQC
ELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYVDADLLREIKQHLKQQQEGLSHLIS
IIKDDLEDIKLVEHGLNETIHIRGGIFS
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggccttcaactttggggctccctcgggcacgtctggcaccgctgcagcccccgcggcc
ccctcgggtgggtttggaggatttgggacaacatctacaacagcaggttctgcattcagc
ttttctgctccaactaacacaggcactactggactcttcggtggtactcagaacaaaggt
tttggatttggtactggttttggcacaacaggaactagtactggtttaggtactggtttg
ggaactggactgggatttggaggatttaatacacaacagcaacagcagcagcaaacgaca
ttaggtggtctctttggtcagcctgcacaagctcctgcccaatccaaccagctgatacat
acagcaagtgctctttctgctccaacgctattgggagatgagagagatgctattttggca
aaatggaatcaactgcaggccttttggggaacaggaaaaggatattttaacaacaacatt
gcaccagtggaattcactcaagaaaatcccttttgccgatttaaggcagtaggttacagt
tgtatgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaagaa
gcagatattcgaggccagcaacaacagttggtagaatcattgcataaagttttgggagga
aaccagacccttactgtaaatgtagaggggattaaaacgttgccagatgatcagacagaa
gttgtcatttacgttgttgaacgttctccaaatggtacctcaagaagggtcccagctaca
acgctgtatgcccattttgaacaagccaatataaaaacacaattgcagcaacttggtgta
accctttctatgactagaacagaactttctcctgcacagatcaaacagcttttacagaat
cctcctgctggagtcgatcctattatatgggaacaagccaaggtggataaccctgattct
gaaaaattaattcctgtaccaatggtgggtttcaaagaacttctgcgaagactgaaggtt
caagatcagatgactaagcagcatcagaccagactagatatcatatcagaagatattagt
gagttacagaagaatcaaactacaactatggccaaaattgcacagtacaaaaggaaactc
atggatctttcccacagaactttacaggtcctaataaaacaggaaattcagaggaagagt
ggttatgccatccaggcagatgaagagcagttgcgagttcaattagatacaattcagtgt
gaactaaatgcccctactcagttcaagggccgactaaatgaattgatgtcccaaatcagg
atgcagaatcattttggagcagtcaaatctgaagaaaggtattacgtagatgcagatctg
ctacgagaaatcaagcagcatttgaaacaacagcaggaaggccttagccacctgattagc
atcataaaagatgatctagaagatataaagttggtggaacatggactgaatgaaaccatc
cacatcagaggtggtatcttcagttga

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