Loxodonta africana (African savanna elephant): 100662415
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Entry
100662415 CDS
T04351
Symbol
CCDC88B
Name
(RefSeq) LOW QUALITY PROTEIN: coiled-coil domain-containing protein 88B
KO
K25813
coiled-coil domain-containing protein 88B
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lav04812
]
100662415 (CCDC88B)
Cytoskeleton proteins [BR:
lav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
100662415 (CCDC88B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
TMF_TATA_bd
DUF4407
Gp-FAR-1
Motif
Other DBs
NCBI-GeneID:
100662415
NCBI-ProteinID:
XP_023415524
LinkDB
All DBs
Position
Unknown
AA seq
1454 aa
AA seq
DB search
MEGGEGPRFRDFLSGSLATWALGLAGLVGEAEEPQDEEEEEEKEEGLLSPEKRFLRLSNG
ALLLRVLGIIAPSSRGGPQMVGGHEGPAAGRVRNLSHLWGRLRDFYQEELQLLILSPPPD
LQMLGFDPLSEEAVGELEGVLRLMLGASVQCEHRELFIRHIQSLRLEVQSELAATIQEVT
QPGAGMVLALTGPEPGELTPSELEVLSWSLMGTLSRLARERDLGAQRLAELLLEREPAPL
PPEAPIKAPLEGPSHHLALQLANTKAQLRRLRQELEEKAELLLDSQAEVQGLEAEIRRLR
QEAQALSGQAKRAELYREEAEALRERAGRLPRLQEELRRCRERLQAAEACKGQLEEERAL
SGTLEASKXLLEGQLEAARERCARLHESQRENLLLRTRLGEAHAELDSLRHQVDQLSEEN
VELELELQRSLEPPPGSPGEASLPGAAPSLHEEVREAEAGRLRTLELENQELRNLLQVLQ
GHPRRQPPLLEEESEDSIVPEPAAAPLPPLAEDQGPQGLVPQVVDEGPQALGLTPGTSDT
ALQGSDECPQASESGPQAMEEPLQEAAVAPQTSDSTSQELGPAVETQESLEKAGHEAPLQ
THASGFAPSQSPEIQIQAQLCWEEETGTEEDSQGQSVSEAQCLRQEGPGLNPGLLDLSLS
AHLGEQGTPEQGLDLSNVQTEVRDHEQRLEGMAGEPAQQHPQQRLEVAPETQAYERLIPG
EMLASGVPEQRTLSEEVAQLRREAQALRAELEAQTRRLEARGTEAARLSEELAQARRAEA
EAHQEAEAHAQEQARLREAVETAGRELEAAAREREALAEALAAAGRERRQWEREGPRLRA
RAEEAEERLQALERKGDQHQEEAERERQEKQALREELEKAVVRGQELGARLECLQRELEQ
AALERQEWLREQECQNQRWGGTKWEAGAWGRVAAHRGGTQRECEPGGLGGCPSCPATADP
SSGQNAALAAEKAALRGQLQHLEGQLGSMQGRAQELLLQSQRAQEHSSRLQAEKAMLERQ
GQELHKRLGVLEEEVQAARQSQEETRRQQQALLRDHEALAQLQRRQEAELEGLLARHRDL
KANMRALELAHRELQGRHEQLQAQRANLEAQEVALLAERERLMQDGHRQRGLEEELRRLQ
SEHDRAQLLLAEVSRERGELQGERGELRGRLARLELERAQLEAQSQRLRESNQQLDLNAC
RLTTQCELLTQLRSAQEEENRQLLAEVQALSRENRGLLERSLESRDHLHREQREYLDQLN
ALRREKQKLVEKIMDQYRVLEPGPLPRTKKGSWLADKVKRLMRPRREGGPHGGPRLGADR
AGSTESLGGPPETELPEGREADGTGLPSPAPMRRAQSSLCLRDETLAGGQRRKLSSRFPV
GRSSESFSPGDTPRQRFRQRRPGPLGAPNSYGKGSGVGWDGSVETLAEHEADVSREGLEV
QEQEKRLLTPSLSQ
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggcgaggggcccagattcagagacttcctgagtgggagcctggccacctgg
gcgcttgggctggcggggctggtgggggaggcagaggagccccaggacgaagaagaggag
gaggagaaggaagaggggctccttagccctgagaagaggttcttgcgactcagcaatggg
gccctgcttctccgggtgctgggcattattgcccccagttccagagggggacctcagatg
gttgggggccatgagggtcctgcagctgggcgggtccggaacttgagccacctgtggggt
cgactgagggatttctaccaggaggagcttcagctgctgatcctgtcgccacccccagac
ctccagatgttggggtttgaccctctctcagaggaggcggtgggggagctggaaggagtt
ctgcggctgatgctaggggcgtcggtgcagtgtgagcaccgggaactcttcatccgacac
atccagagcctccgtcttgaggtccagagcgagctggccgccaccatccaggaggtgacc
caacccggagcgggcatggtgttggcgctgactgggcctgagcctggggagctgacaccc
tctgagctagaggtgctgtcctggagcctgatggggacactgtccaggctagcacgggag
cgagacttgggtgcccagcggctagctgaactgctgctggagagggagccggcccctctc
ccgcctgaggctcccatcaaggctcccctggagggcccctcgcaccacctggccctgcag
ctggccaacactaaggcccagcttcggcgcctgcggcaggagctggaggagaaggctgaa
ttgctgctggactcccaggcggaggtgcagggcttggaggctgaaattcgaaggctccgg
caggaggctcaggcgctgtcggggcaggccaagcgggcggagctataccgcgaggaggcc
gaagcgctgcgggagcgggccggccgcctaccccgcctgcaggaggagctgcggcgctgc
cgggaacggctgcaagcggccgaagcttgcaaaggccagttggaggaggagcgggcgctc
tcaggaactctggaggcctcgaagncgctgctggagggacagctggaggccgctcgcgag
cgctgtgcccgactgcacgagagccagcgcgagaacctgctgctgcggacccggctgggc
gaggcccatgcggagctggactctcttaggcatcaggtggaccaactgtcagaggagaat
gtggagctggagctggaacttcagcgcagcctggagccacccccgggctctcctggggag
gcatccctgccaggagcggccccctcgctgcatgaggaggtgagggaggccgaggctggg
cggctgcggaccctcgagctggagaatcaagagcttcgaaacctgcttcaggtgctgcag
gggcacccaagacgacagccccccctgctggaggaggagagtgaggattccatagttcca
gagccggctgcagctcctctgccacccctggcagaagaccagggcccccagggtctggtc
ccccaggtggtagatgaaggcccccaagctttgggcctaactcctggaacatcagataca
gcgctccaggggtcagatgagtgtccccaggcatctgagtcaggcccgcaggcgatggag
gagcccctccaggaagcagccgtggccccccagacctcagactcgacctctcaagagtta
ggccctgctgtggagacacaagagtcccttgagaaggctggccatgaagctcctctccag
acccatgcctctggttttgctccatctcagagtccagagatccaaattcaggcccagctg
tgctgggaggaggagactgggacagaggaggattcccaagggcagtcagtgtctgaggct
cagtgtctgagacaggagggccctgggctcaacccaggactcttggacctcagcctcagt
gcacatctgggggagcaggggaccccagagcaaggcctggacctgtccaatgtgcagaca
gaggtcagagaccatgaacagaggctggaggggatggctggggagccagcccagcaacac
ccacagcagaggttggaagtggctcctgagacgcaagcctacgagaggctgatcccgggg
gagatgctggccagtggtgtaccagagcagaggactctgagtgaggaggtggcccagctg
aggagagaggcccaggctctcagagctgagctggaggcccagaccagaaggctggaggcc
cgaggcacggaggccgcccgcctctctgaggagctggctcaggctcgcagggcagaggcg
gaagcccaccaggaggcagaggcccatgcccaggagcaggcccggcttcgtgaggcagtg
gagacagctggccgggagctggaggctgcggcgagggagagggaggcactggccgaggca
ctggcggcagcaggccgagagcggagacagtgggagcgagagggcccccggctgcgggcc
cgggctgaggaggctgaggaacggcttcaggcactggagaggaagggcgaccagcaccag
gaggaggcagagagggaacgacaggagaagcaggccctcagggaggagctagagaaggct
gtggtacggggccaggagctgggggcccggctggagtgtctgcagcgggagctggaacag
gcggctctggagcggcaggagtggctgcgggaacaggagtgccagaaccagaggtggggg
ggcaccaagtgggaggcaggggcttgggggagggtggcggctcatcgaggtggaacgcag
cgtgagtgcgagccgggtggccttggagggtgccccagctgcccggccactgctgaccct
tcctccgggcagaatgccgcgctggcagccgagaaggcagctctgcgggggcagctgcag
cacctggagggccagctggggagcatgcaggggcgggcccaggagctgctgctgcagagc
cagcgggcacaggagcacagcagccgcctgcaggctgagaaggccatgttggagcggcag
ggccaggagctgcacaagaggctgggggtgctggaggaggaggtacaggcggctcggcag
tcccaggaggagacccgcaggcagcagcaggccctgctgcgggaccacgaggccctggcc
cagctgcaacggcggcaggaggctgagttggaggggctgctggcccggcaccgcgacctc
aaggccaacatgcgggcgctggagctggcgcaccgtgagctgcagggccgccatgagcag
ctgcaggcccagcgggccaacctggaggctcaggaggtggccctgctggcggagcgcgag
cgtctgatgcaggatgggcatcggcagcgggggctggaggaggagctgcggcggctgcag
agtgagcacgacagagctcagctgctgctggcagaggtgtcccgggagcgaggggagctg
cagggtgaacgcggggagcttcggggccgcctcgcgcggctggagctggagcgggcacag
ctggaggcacagagccagcgacttcgtgagtccaaccagcagctggatctgaacgcctgc
cggctgaccacgcagtgtgagctgctgacacagctgcgaagtgcccaggaggaggagaat
cggcagctgctggcagaggtgcaggccctgagccgggagaaccgggggcttctagagcgc
agcctggagagtcgagaccacctgcaccgggagcagcgggagtacctggaccagctgaac
gccttgcgcagagagaagcagaagctggtggagaagatcatggaccagtaccgcgtgcta
gagcctgggcccctgccccggactaagaagggcagctggctggcagacaaggtgaagagg
ctgatgcggccccggcgggaggggggcccccatggggggccacgcctgggggccgatagg
gctggcagcaccgagagcctggggggccccccggagacggagctccccgagggcagggag
gcagatgggacagggctcccctcaccagcacccatgcgccgggcccagagctccctgtgc
ctacgggatgagaccctggcaggtgggcagcggcggaaactcagctcacggttccctgtg
gggcgaagctctgagtcattcagccctggggacaccccacggcaacgattccgccagcgc
cgcccaggccccctgggggcacccaactcctatggcaaaggatctggtgtgggatgggac
ggctccgtcgagaccctggcggaacatgaagcagatgtcagccgagagggcctcgaggtg
caggaacaggagaaacgtctcctcaccccttccctcagccagtga
DBGET
integrated database retrieval system
