Loxodonta africana (African savanna elephant): 100662759
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Entry
100662759 CDS
T04351
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X5
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lav04990
]
100662759 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
lav04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
100662759 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
100662759
NCBI-ProteinID:
XP_010589732
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MACPALGLEALQPLLPEPPPDPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVAVKSLDYS
RKLRNVLVTIYWLGKAANSCASYSGATLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSHQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGELKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWST
ATSPLGGDRPFSYPETIEEEGSEVGSPCEEDPVSHMDFGGKSSDSGLELPGGSGKEQPSP
EGAMVAPAPKSEEKDAAEIQKRRKLEQVGIKVMPAAQRFASRKQLSNDKEAVRDIILRKE
NAFLAHQQGKDLESEDEVTCRLPDLEKDDFAARRARMNQNKPKVPLNQLLYGPYRKKEPE
KSDGSKQLSKGISGRKNLEYTRNPGQTQKVKAKVTCITRAQESEPMEEGLRKMPDLYKDD
LAQRRIHGSLTPHREAPSFVTVSKITEADLETWERLKVSEKTRDGDVQHICTPEPLPEIK
AETAIRDDFASRKARAYKKSSSPRQKFVHFGPVTEIDQQKWKRLSIGKAGPREDAEEVVS
YTSKVQAYSVSPASVAASSLEEHHVLNPQNDCRIVNSGVNDYGKRVSSLAPVLETQEENV
CSLGECPRKTEKVTSKQLPQDGKEENEGVAQRGSEILPEAEKSEEKNQPLWCPLASEWEA
SGTEENLEKMTAPTWNGSGVKDQAKLSDSQKDDMVTRRTGVSLRHTGFNPNQFLPIPFAK
QQDVEVSAKGSPVQDKRYGPRTPVSDDAESTSMFDVRCEEEAAVQPHSRARQEQLQLINN
QLREEDDKWQDDLARWKSRRRSVSQDLIRKEEERKKMEKLLAGEDGTSERRKSIKTYREI
VQEKERRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSAEPN
LCPFLSDPNPMKYLRQQSLPPPKFTAIVETTIAGTSVLDTSMLAGSGSPSKTVTPKAVPM
LTPKPYSQPKNSQEVLKTFKVDGKVSMNGEMIHGDEEKERECPTVALSPSLTKSQMFEGV
ATVHGSPVELKQGNNGIEINIKKPNSVPQELTATTEEAEPNSQEDENDGGKAEKGNTEFA
SSEPQHFTTTVTRSSPTVAFAEFSSSPQLKTHVPEEKDQKKLENEMSGKVELVLSQKVIK
PKSPEPEATLTFPFLDKMPETNQLHLPNLNSQVDSPSSEKSPVTTPFKFWAWNPEEERRR
QEKWQQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSS
SSADQLSTSSSITEGSGTVNKMDLESCQEEGQERRQKKPLQEGDNDLLLKNSESDPLEEK
RSLTQGALAHSENPVPKGIHQDQQLEAEAGAPHCGMSPQLSQDPSRNQQVLNPPTPISED
VKPKTLPLDKNINHQIESPSERRKTSPQENFQAGHLSPCSPTPPGQSPNRSISGKKLCSS
CGLPLGKGAAMIIETLNLYFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCNDCYMRSR
SAGQPTTL
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtcccgccctcggtctggaagctcttcagcctttgctgcccgagccgccccct
gaccctgctttctccgaggcacagaagtggatagagcaagtaactggcagaagttttggt
gataaggattttcggacagggttagaaaatgggatcctcctctgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggattggac
aatatcatcttattcttgagaggttgtaaagagcttggccttaaagaatctcaacttttt
gacccaagtgacctccaggatacatcaaacagagtagcagtcaagagccttgattatagc
agaaagctcagaaatgtattagttaccatttactggctgggaaaagcagcaaatagctgc
gcatcctatagtggagctacgctgaacttgaaggaattcgaaggattgttggctcagatg
agaaaggagactgatgacattgagagtcctaagcgtagtatccgagacagtggctacatt
gactgctgggactccgagcgcagtgactccctgtctcctccccggcacggcagagatgat
tccttcgacagcctggattcctttggctcccgttcccatcagacaccttccccagatgta
gtcctcaggggaagcagcgatgggagaggaagtgactctgaatctgacttgcctcatcgg
aagctgccagatgtgaagaaggatgatatgtccgcgcggcggacttcccatggtgagctg
aaatcagcagtgccttttaaccagtacctcccgaacaaaagcaaccagacagcttatgtc
cctgctcctctgagaaagaagaaagcagagcgagaggagtacagaaaaagctggagtact
gccacttcccccctgggcggggacaggcccttcagctatccagaaacaatagaggaagag
ggaagtgaagtggggtctccttgtgaagaggacccagtcagccacatggactttggtggg
aagtcttctgatagtgggttagaattacctggtggcagtggtaaggaacagccttctcca
gagggagccatggtggcaccagctcccaagtctgaagaaaaagatgcagctgaaattcaa
aagcgcagaaagctagagcaagttggaatcaaggtcatgccagcagcacagcgctttgcc
agtcgaaaacaattaagtaatgacaaagaagctgttcgtgatattatccttcgcaaagaa
aatgctttcctggcccaccaacaaggcaaagatttggagtctgaagatgaagttacatgt
cgactgcctgatcttgagaaagacgactttgctgcaaggagagcaaggatgaaccagaac
aagccaaaggtgccattgaatcagctgctgtatgggccttatcgaaaaaaagaaccagag
aaatcagatggcagcaaacaactctcaaagggaatctcaggaaggaaaaatctagaatat
acaaggaacccgggccaaacacaaaaggtgaaggcgaaagtgacctgtattactcgagcc
caggaaagtgaacctatggaggaaggactcaggaagatgcctgatctttacaaagatgac
ctggcacagcggaggattcacggcagcctcactccacaccgtgaggctccgagctttgtc
acagtctccaagataacagaagctgacttggagacgtgggagaggctgaaagtgtcagag
aagacaagggatggagatgttcagcacatctgcacccctgagcctttaccagaaatcaaa
gcagaaacagccatccgagatgactttgccagccgcaaagcaagggcctataaaaaatcc
tccagccctcggcaaaagtttgtgcactttggaccggtgacagagatagatcagcagaaa
tggaagcggctcagcattggcaaggccgggcctagggaggatgcggaagaagtcgtcagt
tacaccagcaaggtccaagcttactctgtgtcccctgcctcagtggccgcttccagctta
gaagaacaccacgtgcttaacccacagaatgactgcagaatagtgaattctggtgtaaat
gactatggcaaaagggtctcaagtctggctcctgtgttggagactcaggaggagaatgtc
tgcagcttgggcgagtgcccaaggaagactgagaaagttacatccaaacagctgccacag
gatggaaaagaagagaatgaaggagttgctcagagaggttctgagatactgccagaggca
gaaaaatctgaggagaagaaccagccactttggtgccctctggcctctgagtgggaggct
tcagggacagaagagaacttggagaagatgacagctcctacctggaatggcagtggagtg
aaagaccaagcaaagctgtctgactcacaaaaagatgacatggtgaccaggagaactggg
gtgtcccttagacacactggattcaacccaaaccagttccttccgattccatttgcaaaa
caacaggatgtggaggtatcagccaagggttcaccagtgcaagataagagatacggtccg
agaactcctgtgtctgatgacgcagagagcacgagtatgtttgatgtgcgctgtgaggag
gaggctgcggtacagccgcacagcagggcccgtcaggagcagctgcagctgataaataac
cagctgagagaagaggatgacaaatggcaagatgacctggctcgatggaagagccgcaga
agaagtgtttctcaggacttaatcaggaaagaagaagaaaggaaaaaaatggaaaagtta
ctggctggagaagatgggacaagtgaacgaaggaaaagcatcaaaacctatagagaaatt
gttcaagaaaaagagcggagagagagagaattgcatgaggcgtataagaatgctcggtcc
caggaggaggcagaggggattcttcagcagtacattgagaggttcaccatcagcgaggct
gttcttgaacgcctggagatgccaaaaatcctggaaagaagccattcagcagagccaaac
ttatgccccttcctgagcgatcccaaccccatgaaatacctgcggcaacagtcactgcct
ccacccaaattcactgccattgttgaaaccaccatcgctggtaccagtgttctggatacc
agcatgttagcaggcagtgggtctccaagcaaaactgtcactcccaaagcagtgcctatg
ctgacacccaagccttactcccaacccaaaaactctcaagaggttctgaagacctttaag
gtagatgggaaagtcagcatgaatggagaaatgattcatggagatgaggaaaaggaaaga
gagtgccccacagtggcactttctccctccttaaccaagtcccagatgtttgaaggtgtg
gccacagtgcatgggtccccggtggaattgaaacaaggcaacaatggcattgagatcaac
ataaagaaaccaaattctgttccccaagaattgacagcaaccactgaggaagctgaaccg
aacagtcaggaggatgagaatgatggtggaaaagcagaaaaggggaacacagaatttgcc
tcatcagagccacagcattttacaacaaccgtaactcgatctagcccaactgtggccttt
gcggagttttcctccagcccccagctaaaaacccacgtgccagaagaaaaagatcagaag
aaactcgaaaatgaaatgagtggaaaggtggagttggtgctgtcacaaaaggtaataaag
ccaaaatctccagaaccagaagcaaccctgacgtttccatttctggacaaaatgcctgaa
accaaccaactgcatttgccaaatctcaattctcaagtggattcaccaagcagtgaaaag
tcacctgtaactacaccttttaaattctgggcatggaacccagaagaggaacgcaggcga
caggaaaaatggcaacaggagcaggaacgtttgctccaggagagataccagaaagaacag
gacaaactgaaagaagaatgggaaaaggcccaaaaggaggtggaagaggaagaacgcaga
tactatgaggaggaacgcaagataattgaagacacggtggttccatttactgtttcttca
agttctgcagaccagctgtccacatcctcctccataactgaaggcagtgggacagtgaat
aagatggacttggaaagctgtcaagaggaaggacaagagagaaggcagaagaaaccattg
caggagggtgacaatgacttattgcttaagaatagtgaaagtgatccactggaggaaaag
aggagcctaactcaaggggccctggctcactctgagaaccctgtaccaaaaggaatccac
caggaccagcaactggaagcagaagctggggctccacactgtgggatgagcccacagcta
tctcaggatccatcccggaatcagcaggtattaaacccacctacgcccatttcagaagat
gtgaagccaaaaactctcccactggataaaaatattaaccatcagattgagtctccaagt
gaaaggcggaagacaagccctcaagagaacttccaggctgggcatttgtccccctgctct
cccacccctcctggccagtcaccaaacaggtctataagtgggaagaagctgtgctcctcc
tgtggccttcctttgggtaaaggagctgctatgatcatcgagactcttaatctctatttt
cacatccagtgctttaggtgtggaatttgtaaaggacagcttggagatgcagtgagtggg
acagatgtcaggattcgaaatggtcttctaaactgtaatgattgctacatgcgatccaga
agtgctggccaacctacaacgttgtga
DBGET
integrated database retrieval system
