Loxodonta africana (African savanna elephant): 100662988
Help
Entry
100662988 CDS
T04351
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04151
PI3K-Akt signaling pathway
lav04510
Focal adhesion
lav04512
ECM-receptor interaction
lav04820
Cytoskeleton in muscle cells
lav04974
Protein digestion and absorption
lav05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100662988 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100662988 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100662988 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100662988 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100662988 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100662988 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lav04147
]
100662988 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
lav00536
]
100662988 (COL6A2)
Exosome [BR:
lav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100662988 (COL6A2)
Glycosaminoglycan binding proteins [BR:
lav00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100662988 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
100662988 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
100662988
NCBI-ProteinID:
XP_023396790
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MFQGTCCVLLLWGLVGILHAQQQGITFPIVSDRNNNCPEKTDCPINVYFVLDTSESITMQ
SPTDSLLYHMQQFVPELISQLQDAFYLDQVALSWRYGGLHFSDQVEVFSPPGSDRGSFTK
ALQGIRSFRRGTFTDCALANMTQQVRQHGTKGVVNFAVVITDGHVTGSPCGGIKMQAERA
REEGIRLFAVAPNPNLNEQGLRDIASSPHELYRNNYATMRPGTTDINEDTINRIIKVMKH
EAYGECYKVSCLEIAGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPK
GVPGFKGEKGEFGADGRKGSSGLAGKNGTDGQKGKLGRIGPPGCKGDPGNRGPDGYPGDA
GSPGEQGDQGAKGDAGRPGRRGPPGESGAKGSKGYQGNNGAPGSPGVKGAKGGPGPRGPK
GEPGRRGDPGAKGSPGNDGPQGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQGAL
GEPGKQGSRGDPGDAGPRGEPGSPGPKGDPGRPGFSYPGPRGAPVSPGMGQEPWGDVGVV
VSDLKILVEEPSCSLASLCQAPLRLPSQDRERAERGQGCVIRSKGRQHQEPASYHDVSDR
SSQCITLRPENTVCQLSNIDWTSPQAPGMSRRTTQTYLFLSPSRPTQAGAVGGDHTLLQC
SRAQPRYLLRPTCPFPFQADPGPPGEPGPRGPRGVPGPEGEPGPPGDPGLTECDVMTYVR
ETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDPKSETGTR
VGVVQYSHEGTFEAIQLDDERINSLSSFKEAVKNLEWIAGGTWTPSALKFAYNQLIKESR
RQKTRVFAVVITDGRHDPRDDDLNLRALCNDDAVTVTAIGIGDMFHEQHESENLNSIACN
KPQQVRNMTLFSDLVAEKFIDDMEDILCPDPQIVCPDLPCQTELYVAQCTQRPVDVVFLL
DGSERLGEQNFLKARRFVEEVSRRLTLARRDDDPLNARVALLQYGGPREQQLAFPLTANL
TVIHQALEDARYLNSFSHVGSGIVHAINTVVRGAQGGARRHAELSFVFLTDGVTGNESLE
ESLHSMRKQNVVPTVVAVGSDVDMDVLSKISLGDTSAIFREKDYDSLVQPGFFDRFIRWI
C
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaggcacctgctgtgtgctcctgctctgggggcttgtggggatactccacgcc
cagcagcaggggatcacgtttcccattgtctccgatagaaacaataactgcccagagaag
accgactgccccatcaacgtgtacttcgtgctggacacctcggagagcatcaccatgcag
tcgcccactgacagcctgctctaccacatgcagcagttcgtgccagagctcatcagccag
ctgcaggatgccttctaccttgaccaggtggccctgagctggcgctacggtggcctgcac
ttctctgaccaggtggaggtgttcagcccgccaggcagtgaccgcggctccttcaccaag
gcgctgcagggcatccgctccttccgccgtggtaccttcactgactgcgcactggccaac
atgacgcagcaggtgcggcagcacggcaccaagggcgtggtcaacttcgctgtggtcatc
accgacggccacgtcaccggcagcccctgtgggggaatcaagatgcaggctgagcgggct
cgagaggagggcatccggctcttcgctgtggcccctaaccccaacctgaatgagcagggt
ctgcgggacattgccagctcaccacacgagctgtaccgcaacaactatgccaccatgagg
cctggcaccactgacatcaatgaggataccatcaaccgcatcatcaaggtcatgaaacat
gaagcttacggtgagtgttacaaggtgagctgcctggagatcgctgggccgcctggcccc
aagggctaccggggacagaagggtgccaagggcaacatgggtgagccaggagagcctgga
cagaaggggcgacagggagatccaggcattgaaggccccattggattcccaggacctaag
ggtgttcctggcttcaaaggagagaagggcgaatttggagctgatggtcggaaggggtcc
tccggccttgccggcaagaacgggactgacggacagaagggcaaactggggcgcatcggg
cctcctggctgcaagggtgaccctgggaaccggggccctgatggctacccaggggatgca
ggcagtcctggggagcaaggagaccaaggtgccaagggggacgccggccgcccaggacgc
agaggacccccaggagaaagtggggccaaaggcagcaagggatatcaaggcaacaatggt
gccccagggagtcccggcgtgaaaggagccaagggcgggccggggccccgaggacccaaa
ggcgagcctggacgcagaggagaccccggagccaagggcagccctgggaatgatggcccc
cagggggagaagggggaccctggccctgaggggccccggggcctggctggagaggttggc
aacaaaggagccaagggggaccgcggcctgccgggacccagaggccctcagggggctctc
ggggagccagggaagcagggatctcggggagaccctggtgacgctgggccccgtggagag
ccaggatcacctggccccaagggagaccccggccggcccggattcagttacccaggaccc
cgaggagcgcctgtaagtcctggcatgggccaggagccctggggggatgtgggggttgtt
gtgagtgacctgaagattcttgttgaggagcctagctgctccctggcttctctgtgccag
gctcccctacgcctgccgtcccaggacagggaaagggcagaaagaggtcaagggtgtgta
atcaggtccaaaggcagacagcaccaggagccagcgagctaccatgacgttagtgacagg
tcatctcaatgcataaccctacgccccgagaatactgtctgccagctctcaaacattgac
tggacctcgcctcaagccccagggatgagcaggagaacaacacagacttacctcttcctc
tcaccttccaggcccacccaggcaggggctgtgggtggggatcacacgctcctgcagtgc
tcaagggcccagccaaggtatctgctgaggcccacttgccctttcccttttcaggcagac
cctggtccccctggtgagccgggccctcgggggccaagaggagtcccaggacctgagggt
gagcctggcccccccggagaccctggtctcacggagtgtgacgtcatgacctacgtgagg
gagacgtgtgggtgctgtgactgtgagaagcgctgtggtgccctggacgtggtgtttgtc
atcgatagctctgagagtatcggctacaccaacttcactctggagaagaacttcgtcatc
aacgtggtcaaccggctgggcgctattgccaaggaccccaagtcagagacaggtactcgt
gtgggcgtggtgcagtacagccatgaaggcacattcgaggccatccagctagatgacgag
cgcatcaactcactgtccagcttcaaggaggctgtcaagaacctcgagtggattgccggt
ggcacctggacaccctcagccctcaagttcgcctacaaccagctcatcaaggagagccgg
cggcagaagacccgcgtgttcgcggtggtcatcacggacgggcgtcacgacccacgggat
gatgacctaaacctgcgggcgctgtgcaatgacgacgctgtcacagtcacagccattggc
atcggtgacatgttccacgagcaacacgagagtgagaacctcaactccattgcctgcaac
aagccccagcaggtgcgcaacatgacgcttttctccgacctggtggccgagaagttcatc
gatgacatggaggacatcctgtgcccggatccccagattgtctgccctgaccttccttgc
caaacagagctgtacgtggcccagtgcacgcagcggcctgtggacgtcgttttcctgctg
gatggctctgagcggctgggcgagcagaacttcctcaaggcccggcgcttcgtggaggag
gtgtcaaggcgactgacgctggcgcgccgggacgacgacccgctcaacgcccgcgtggcg
ctgctgcagtacggcggcccccgtgagcagcagctggccttcccgctgaccgccaacctg
accgtcatccaccaggcgctggaggacgcgcgctacctcaactccttctcgcacgtgggc
agcggcatcgtccacgccatcaacacggtggttcgcggggcgcagggcggggcgcggcgc
cacgctgagctgtcctttgtcttcctcaccgacggcgtcaccggtaatgagagcctcgaa
gagtcgctgcactccatgcgcaagcagaacgtggtgcccacagtggtggccgtgggcagc
gacgtggacatggacgtgctctccaaaatcagcctgggcgacacgtctgccatcttccgc
gagaaggactatgacagcctggtgcagcccggcttcttcgacaggttcatccgctggatc
tgttag
DBGET
integrated database retrieval system
