Loxodonta africana (African savanna elephant): 100663005
Help
Entry
100663005 CDS
T04351
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lav03009
]
100663005 (UTP20)
Ribosome biogenesis [BR:
lav03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100663005 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
MBTPS1_3rd
DUF7051
Motif
Other DBs
NCBI-GeneID:
100663005
NCBI-ProteinID:
XP_010599811
LinkDB
All DBs
Position
Unknown
AA seq
2809 aa
AA seq
DB search
MKIKPVSHKTENTYRFLTFAERLGNVNIDIIHRIDRTSSYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIKNSFAYQPLLDLVVQLARDLQT
DFYPHFQDFFLAITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSNIYRWPFSLHDI
TILWSPSLRALETSLTQLSSGTPSHLDFIMYSVSDKNALFNLMFLDLDKHPEKVEGVGQL
LFEMCKGVRNMFHSCTGKAVRLIVQKLGPVTETETQLPWILVGETLKNMVKSTAFYIHKE
HFGTFFECLQDSLLDLHTKVTKTNCCESSEQIKRLLETYLILVKHGSGSKITNPVDVCKV
LSQTLHVANLSTSCRETLLAVISALILGENVSLPETLIKETIEKTFESGSERHLILDFSE
VMFAMEQFEQLFLPSFLSYIENCFLIDDVTVKDEALATLAKLILNKAPPPTAGSMAIEKY
PLVFSQQTVESYLKQTRSKGEKEQSPVLDHLLSIIQLPPNEDATYLSHSWAALVVLPHIR
PLEKEKVIQLVTCLIESLFMTVDRGSFGKGNLFVLCQAVNTLLSLEESSELLHLVPVERV
KNLILTFPLEPSVLLLADLYYQRLSLCGCKEPLSQEALMELYSKLQANISTGVSKIRLLT
IRILNHFEVRLPELMEDDGLSERQSAFAILRQAELIPATVSDYREKLLHLRKLRHDVVQT
AVPDGPLQEVPLRYLLGMLYVNFSPLWDPVIELISSHAHEMENKQFWKVYYEHLEKAATH
AEKELQNYERDEEKSIGDESWEQTQEGNIGALYHTQLALKTDCRERLDHTNFRFLLWRAL
TKFPERVEPRSRELSPLFLRFINNEYYPADLQVAPTQDLQRKGKRVVAEETEEEPTAGDD
EELEEEEVPQDEPTQKRKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYDLYLQLLLHQ
DQTVQKITLDCIMTYKHPHILPYRENLQRLLEDRSFKEEIVHFSISEDNTIVKTAHRADL
FPVLMRILYGRMKNKTGTKTQGKSASGTRMSIVLRFLAGTQPEEIQIFLDLLFEPVKHFK
NGECHSAVIRAVEDLDLSKVLPLGRQHGILNSLEIVLKDISHLISAYLPKILQILLCMTA
TVSHILDQREKIQLRFINPLKNLRRLGIKMITDIFLDWESYQFRTEEIDAVFHGAVWPQI
SRLGSESQYSPTPLLKLISIWSRNARYFPFLAKQKPGHPECDILTNVFAILSAKNLSEAT
ANIVMEIANDLLTLPDFEPTETVLSLPVTGCEYTEVAENADESITIGGRLILPHVPVILQ
YLSKTTISAEKVKKKKNRAQVSKELGILSKISKFMKDKEQSSLLITLLLPFLHRANIPQE
TEVDILMTVQNLLKHCLDPTSFLKPLARLFSVIKNKLSRQLLCAVFQNLSNFESGLKYIT
DVVKLNAFDQRHLDDINFDVRLSTFQTITSYVKEMQTVDVNYLIPVMHNCFYNLELGDMS
LSDNASVCLMSIIKRLAALNFTEKEYREIIHRSLLEKLRKGLKSQTESVQQDYTTLLSCL
IQTFPDQPEFKDLVQLTDYHDPEMDFFENMKHIQIHRRARALKKLAKQLIEGKIALSSKS
LQNYVMPYAMTPVFDEKMLKHENITIAATEVIGAVCKHLSWSAYIYYLKHFIHVLHTGQI
NQKLGVSLLVIVLEAFHFDHKTLEEQMGKIQNEENTIEMIEIPEHEAMELEEEGKDGEEK
ENRCQSPSDNNEELRNPDAADSEEMSAKESKCITKSVSFLPQNKEELERTIKNIQGTITG
DILPKLHKCLASTTKREEEHKLIKSKVVNDEEVVRVPLAFAMVKLMQSLPREVMEANLPS
ILLKVCALLKNRAQEIRDIARNTLAKIIEDLGVHYLQYILKELQTTLVRGYQVHVLTFTV
CMLLQGLTNKLQVGDLDSCLDIMIEIFNHELFGAIAEEKEVKQILSKIMEARRSKSYDSY
EILGKFVGKNQVTKLILPLKEILQNTTSLKLARKVHETLRRIIAGLIVNQEMTAESILLL
SYGLVSENLPLLTEKEKNPAAPAPDPRLPPQSCLLLPPAPVRGGQKALVSKKTNMHIFIE
SGLRLLHLSLKNSKIKSSSEHVLEMLDPFVSLLIDCLGSMDVKVITGTLQCLIWVLRFPL
PSIETKAEQLTKHLFLLLKDYAKLGAAKGQNFHLVVNCFKCVTILVKKVKSYQITEKQLQ
VLLAYAEEDIYDTSRQATAFGLLKAILSRKLLVPEVDDIMRKVSKLAISGQSEPVRVQCR
QVFLKYILDYPLGDKLRPNLEFMLAQLNYEHETGRESALEMITYLFDTFPQGLLHENCGM
FFIPLCLMMVNDASATCKKMAAVTIKSLLSKINLEKKDWLFDMVTTWFSAKKSLNRQLAA
LICGLFVESEGIAFERRLGTVLPVIEKEIDPETFNDIVEETEEKAADRLLFTFLTLISKL
IKECNIIHLTKPSEILSKIWSHIHTHLRHPHNWVWLTAAQIFGLLFASCQPEELVRKWKA
KKTKKRLPEPVAVRFLTSDLDQKMKSISLASCHQLHSKFLDPSLGEQVVKNLLFVAKVLY
LLVPDSEDKQDETKEDREEQRALGDGLAKEETEGHEACADEKVEPDKEEKEEAKEEPSKP
ATLLWLILKLSQMAKLEAAYSPRNPLKRTCILKFLGAVAMDLGEDRVKPYLPVIIAPLFR
ELNSTYSEQDPLLKNLSQEIIELLKKLVGLESFSLAFASVQKQANQKRALRKKRRALEFV
TNPDIAAKKKLKRHKNKSEAKKRKIEFLRPGYKAKRQKSHSLKDLAMVE
NT seq
8430 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaagcccgtttcccataagacggagaacacgtaccggtttcttacatttgct
gaacgattagggaatgtgaatattgatattattcaccggattgatagaacttcaagctat
gatgaggaggttgaaacctacttttttgaaggcctgctaaaatggagagaattgaacctc
acagaacactttggcaaattttacaaagaagttattgacaaatgccaatcatttaatcag
ttggtctatcatcaaaatgagatagttcagagtttgaagactcacctgcaaattaagaac
agttttgcctatcaaccccttttggacttggttgtgcagttggcgcgagatctgcagacg
gacttctatccacattttcaagatttttttctggccatcacttcaatcctggagactcag
gacacggagttgttagaatgggcgtttacttcactgtcatatctttacaagtacctgtgg
aggctgatggtgaaggacatgtccaatatatacaggtggcccttttctctccacgatatc
accattctgtggtcaccgagtcttcgtgccttagagacatctttgacccagttgtcttca
ggaacaccaagtcatcttgattttattatgtactcggtttctgataaaaatgcgcttttc
aatttaatgtttcttgatctcgataaacatccagaaaaggttgaaggagttggacagttg
ctctttgaaatgtgcaaaggagttagaaacatgtttcactcttgtacaggcaaggcagtc
aggctaattgttcaaaagctaggacctgttacagaaacagaaactcaactaccatggatc
ttagttggagaaacactcaaaaacatggtgaaatccactgcattctacatccacaaggaa
cattttggtacattttttgaatgtttgcaagactcactcctggatctacatacgaaagta
accaaaactaactgttgtgaaagttctgagcagattaaaagattgttggaaacatatctg
atacttgtgaaacacggaagtggatcaaagataaccaaccctgttgatgtttgtaaggtg
ttgtctcaaacgttgcatgtagccaatctgtcaacttcttgccgggagaccctcttggct
gtaatttctgctttgatcctaggagagaatgtttccttgccagagaccctcatcaaagaa
accatagaaaagacttttgagagcggatctgaaagacatttaattttggatttttctgaa
gtcatgtttgctatggagcagtttgagcagctttttctaccaagctttctctcatatatt
gaaaattgcttcttgattgatgatgttacggtcaaagatgaagctctggccactttggcc
aaactcattctgaacaaagcaccacctcccactgctggttcgatggccattgaaaagtac
cctctggttttctcacagcagacagtagaatcctatttaaagcagactagatccaaggga
gagaaggaacagagtccagtactggatcatctcttatctataattcagttacctccaaat
gaagatgcgacttacctttcacattcttgggcagccctggtagtgttacctcatattaga
cctcttgagaaagagaaggtgatacaactagtcacgtgccttatagagtcactcttcatg
actgttgacagagggagctttggaaaaggaaacttatttgttctttgtcaagccgtaaat
actctgctgagtttggaagaatcctctgaacttcttcatttggttcctgtggaacgtgtg
aagaatttaatattaacgtttcctttggagccatctgtgttgctgttggccgatctctat
tatcagagattatccttatgtggctgcaaagaaccgctttcccaggaagctttaatggag
ttatactcgaagttacaagctaacatttcaactggtgtatccaagattcggcttctgaca
ataaggattctaaaccactttgaggttcggcttccagaattgatggaggatgacgggctc
tcggagcgccagtcggcctttgctatactacgccaggcagaactcatcccagcaaccgtg
agtgactacagagagaagctgcttcatttaaggaaactaagacatgacgtggtgcagact
gccgtccccgatgggcctttgcaggaggtgccacttcgttacctattaggcatgttatat
gttaacttcagtcctctctgggatcctgtcattgaactcataagctctcacgcacatgaa
atggaaaataagcaattttggaaagtctactatgaacatctagagaaagcagctacacat
gctgagaaagagttgcaaaattatgaacgagatgaagagaagtccattggagacgaaagt
tgggagcagacccaggaaggaaatattggagccctttatcatacgcagttagcattgaaa
actgactgtcgggaaagactggaccacaccaactttcgatttttgctctggcgcgctctg
acaaaattcccagagagagtagagccacggtccagggagctctctccgctttttttgaga
tttatcaacaatgagtattacccagcggatctgcaagtcgcgccaacccaagatctgcaa
agaaaaggcaaaagggtggtggcagaggaaacggaagaagaaccaacagccggagatgat
gaggagttggaagaagaggaggtgccccaagacgaacccacacagaaaagaaagacaaga
agagctgcagcaaagcagttaattgctcatttacaagttttctcaaagttttcaaatcca
cgggccttgtatctggaatccaaattatatgacctctatcttcagttgttgctacaccaa
gatcaaacagtacaaaaaataaccctggattgcataatgacatataagcatccacacatc
ctcccttatagggaaaacttgcaaagattgcttgaagacagaagctttaaggaagaaata
gtgcattttagcatttcagaagacaatacgatagtgaaaacagcccaccgagcagatctg
tttcctgttttgatgaggattttgtatggacgaatgaagaacaagacagggactaaaact
caggggaaatctgcttcaggcacccgcatgtccattgttctgaggttcctcgcagggacc
cagcctgaggagatccagatattcttagacctgctgtttgaacctgtgaagcacttcaag
aatggagagtgccattctgcagtcattcgagcagtagaagatttggatttatcgaaagtt
cttcctttgggtcgtcagcatggtatcttaaatagccttgaaatagtactgaaggacatc
agtcatctgatcagtgcatacttaccgaagattttgcagatattgctctgtatgacagca
actgtatctcacatccttgaccaacgagaaaagatacaactgaggtttattaacccactg
aaaaatttaagacgtcttggaatcaaaatgataactgatatctttttggattgggaatca
tatcagttcagaacagaagaaattgatgccgtgtttcatggtgcagtttggccccagatc
agcaggcttggatctgaaagtcagtattctcctactcctctgctgaagctaattagtatc
tggagcagaaatgcaagatatttccctttcctggctaaacagaagcctgggcacccagag
tgtgatattttgaccaatgtttttgcaattctctcagcaaagaatctctcagaagccaca
gccaatattgtgatggaaatagccaatgaccttctgacccttccagattttgagcccaca
gaaaccgttttgagcttgccagtaacaggctgtgaatacactgaggtagcagaaaatgca
gatgagtctattacgataggaggaagattaattctacctcatgtacctgtaattcttcag
tatctcagcaaaaccacaataagtgcagaaaaggtgaaaaagaaaaagaatagggcacaa
gtcagcaaggaacttggcattctttcaaagatcagcaagtttatgaaagacaaagaacag
agttctttactcattacactactccttcctttcctccaccgtgccaatattcctcaggag
acagaggtcgatattctgatgacagtacaaaacttgttaaaacattgcttggaccctaca
agcttcctcaagcctctagcaagattattctcagttattaagaacaagttgtcgagacag
ttgctttgtgcagtcttccagaatctttccaattttgagagtggattaaagtatattact
gatgttgtcaagcttaatgcctttgaccaaagacatctcgatgatatcaactttgatgtt
cgcctctcaacgttccagaccatcacgtcttatgttaaagaaatgcaaactgtggatgtt
aattacctaattccagttatgcataactgcttctataatctggagttaggagacatgtct
ttaagtgataacgccagtgtgtgcttgatgagtatcatcaaaaggctagctgccttgaac
ttcacagagaaagaatatcgagaaatcattcatcgttcactcctggagaaattgagaaaa
ggattgaagagccagacagagagtgttcaacaggattataccactctgctttcctgttta
attcaaacctttcccgatcaaccggaatttaaggacttggtacagctgactgattaccat
gacccagaaatggacttctttgagaacatgaagcacattcagattcacagaagagcacga
gccctgaagaaactggcaaaacaattaatagaaggcaaaattgcgctgtcttctaaatct
cttcagaattacgtcatgccttacgccatgactccagtttttgatgagaagatgctcaag
catgaaaacataactattgctgccacagaggttattggagctgtatgtaaacatctctct
tggtcagcatatatttattacttgaaacatttcattcatgttttacatacaggacagatc
aatcaaaagttgggtgtcagtttgctagtaatagtgttagaagcattccactttgaccac
aaaactcttgaggaacaaatggggaaaattcagaatgaagaaaacaccatagaaatgatt
gagataccagagcatgaagccatggagttagaagaagaaggaaaggatggagaagagaag
gaaaatagatgtcagagtccgtcagacaacaacgaggaactgagaaaccctgatgcagct
gattctgaagagatgtcagctaaggaatccaagtgtatcacaaagtcagtctccttcctt
cctcagaataaggaagaattagaaagaacaattaaaaatatccaaggaaccataactggg
gatatcctacccaagctacataaatgccttgcatctacgactaagagggaagaagaacac
aagcttataaagtcaaaggttgtgaatgatgaggaagtggttcgcgttcccctagctttt
gccatggttaaactaatgcagtccctgccacgagaagtgatggaagcgaatctgccaagt
attttgctgaaagtgtgtgcccttctcaagaatagagcacaggagatcagggacattgca
cgcaatactcttgcaaaaataatagaggatctgggtgtgcactacctacaatatatttta
aaggaattacagactacacttgtccgtggctatcaggtccatgtgctaacttttactgtt
tgcatgttgctgcaaggcctcactaacaagctacaagttggggatttggactcctgttta
gatataatgattgagatttttaaccatgagttgtttggtgccattgctgaagaaaaagaa
gtaaagcagatcctctccaaaatcatggaggcacgaagaagcaagagttatgattcttat
gaaatcctgggcaagtttgtaggaaaaaatcaggttacaaaacttatccttccattaaaa
gagatcttacaaaacaccacgagtttaaaactggcccggaaagttcatgaaaccttacgc
cgaatcatagcaggattaattgtgaatcaggaaatgacagcagaatccatcctattgctc
agttatggtttggtcagtgaaaacctacccctgttaactgagaaagaaaaaaatccggca
gcccctgcaccagatccacgtctaccgccccagagctgtcttctgctccccccagctcca
gtgcgaggtggacagaaagccctcgtgagcaagaaaaccaacatgcacatatttattgag
tctgggcttcggctgctgcatctgagtctgaaaaattccaagatcaagtcttcaagtgag
catgttttggaaatgttggatccttttgtgtctctcctcatagactgcctgggttccatg
gatgtgaaggtgatcacaggcactttacaatgcctcatctgggtcttgaggttcccccta
ccttccatagaaacaaaagcagaacagctgacgaaacacctgttccttttgctgaaggac
tatgcaaaactgggggctgccaagggccagaacttccacctggtggtaaattgtttcaag
tgtgtgactatacttgtgaagaaagtgaaatcttaccagataaccgaaaaacagctgcaa
gtcctactggcatacgcggaggaggacatctatgatacctcaagacaagcaactgcgttt
ggtcttctcaaggccattttatcaagaaagttgttggttccggaagtagatgacatcatg
cggaaagtatccaagttggcgatttcgggacaaagtgaacctgtcagagtccagtgcaga
caggttttcctgaaatacattcttgactatccccttggtgacaaattgagaccaaacttg
gaattcatgctcgctcaactgaattatgaacacgagaccgggagagagtctgccttggaa
atgatcacctatctctttgacacgttccctcagggactgctccacgagaactgcgggatg
ttctttattcctctttgtctaatgatggtgaatgatgcctctgccacatgcaaaaagatg
gcagccgtgaccatcaagtccttactcagtaaaatcaaccttgagaaaaaagattggctg
tttgatatggttaccacctggtttagtgcgaaaaagagcttaaacagacagctggccgcc
ctgatctgtggtttattcgtggagagtgaagggattgcttttgagaggagacttggaact
gttcttcctgtgattgaaaaggaaattgatcctgagacctttaacgatatagtggaagag
actgaagaaaaagctgcagatcgccttctgtttacttttcttacactgataagtaaactc
atcaaggaatgtaatattattcatcttaccaagccctctgagattttgagtaaaatctgg
agtcacatacacactcacctgaggcatccacacaactgggtgtggctcactgcagcccag
atttttggactgctgtttgcctcttgccaaccagaagagcttgttagaaaatggaaagcc
aaaaagactaaaaagagactcccagaacctgtagcagtcaggttcctaacaagtgacctt
gaccaaaagatgaaaagtatctctttagcttcttgccatcagttgcattccaaattcctg
gatccgtctctaggagagcaggttgttaagaatttgttgtttgtagccaaagtcttgtat
ttactggtacctgattctgaggataagcaagatgagacaaaagaagacagggaagaacaa
agagctttaggagatggtctggctaaagaggagacagaaggacatgaggcctgtgccgat
gagaaagtggagcctgacaaagaagagaaggaagaggcgaaggaggagcccagcaagcca
gccacactgctctggttgatcctgaagttgtcccagatggcaaaactggaagctgcttat
tcacctagaaaccccttaaagagaacatgcatcttgaagtttcttggggcagtagccatg
gatctgggagaggacagggtgaagccgtatctcccagtgatcatagcacctttgtttcga
gagctgaatagcacctattcagagcaagatcctttgctgaagaatctgtcccaggaaatc
atagaattactcaaaaagctggttggccttgagagcttctcattagcctttgcctctgtg
cagaaacaggcaaatcagaaaagggcactccggaaaaagagaagggctctggagtttgtc
actaatcctgatattgctgccaagaaaaaactgaagaggcataaaaataaaagtgaagca
aagaagagaaaaatagagttcctgcgtccaggctataaggccaagaggcaaaaaagccac
agcctgaaagatttggcaatggtggagtga
DBGET
integrated database retrieval system
