Loxodonta africana (African savanna elephant): 100663273
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Entry
100663273 CDS
T04351
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04151
PI3K-Akt signaling pathway
lav04510
Focal adhesion
lav04512
ECM-receptor interaction
lav04518
Integrin signaling
lav04820
Cytoskeleton in muscle cells
lav04974
Protein digestion and absorption
lav05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100663273 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100663273 (COL6A1)
04518 Integrin signaling
100663273 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100663273 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100663273 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100663273 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100663273 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lav04147
]
100663273 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
lav00536
]
100663273 (COL6A1)
Exosome [BR:
lav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100663273 (COL6A1)
Glycosaminoglycan binding proteins [BR:
lav00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100663273 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
100663273 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Rv1476
FabMG
Motif
Other DBs
NCBI-GeneID:
100663273
NCBI-ProteinID:
XP_010599605
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MRLARTLLPLLLQACWATAQDVDVPANSKAIAFQDCPVDLFFVLDTSESVALRLKPYGAL
VDRVKAFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEVEIIKGLTRMPSGRDELKSSVD
AVKYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNE
AKHLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWDQTRDAEEAIRQTIDTIIDM
IKDNVEQVCCSFECQGPRGSKEVMPEYETVPQLFHGALNPPPRPQLLQEQEDRWAEAQGL
PAPLRCLMCPSSLFQGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVD
GMKGETGYPGLPGCKGSPGFDGIQGPPGPKGDPGAFGLKGNKGEPGTDGEPGKQGSTGPP
GDEGEPGEPGPPGEKGEAGDEGNPGPDGPPGERGGPGETGPRGTPGLRGPRGDPGEAGPQ
GDQGREGPVGVPGDPVRTLPIRSLEYRTKGLTMAPTPPLSSMTVQFEPGQSHAGVVQYSH
NQMQEHVDLSSPNIRNTQELKEAIKKLQWMAGGTFTGEALQYTRDRLLPPSSNNRIALVI
TDGRSDTQRDTTPLNVLCSPGIQVVSVGIMDLFGSSPSSDQLNVISCQGLSSQPRPSISI
VKNNFAELLEDSFLKNVTAEICIDKKCPDYTCPITFSSPADITILLDGSASVGSHNFETT
KRFAKRLAERFLTAQRGDPPHDVRVSVVQYSGTGQQRPDRAALQFLQNYTVVASNVDSMS
FLNDATDVTDALRYVTRFYREASSGAAKKQLLLFSDGNSQGVTAAAIEKAVQEAQQAGIE
IFVVVVGRQVNEPNIRVLVTGKTAEYDVAFGERHLFRVPSYEALLRGVFYQTVSRKVALG
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggctcgcactctactccccctgctgctgcaggcctgctgggccaccgcccag
gacgtagacgtcccagccaactcgaaggccattgcgttccaggactgcccagtggacctg
ttttttgtcctggatacttcggaaagtgtggccttgaggctgaagccctatggggccctg
gtggatagggtgaaggccttcaccaagcgtttcatcgacaacctgagagacaggtactac
cggtgtgaccgcaacctggtgtggaacgcaggcgcactgcactacagtgacgaggtggag
atcatcaagggacttacccgcatgccaagcggccgcgatgagctcaagagcagcgtggat
gccgtcaagtacttcggcaagggcacctacactgactgcgccatcaagaaggggctggag
gagctgcttgtcgggggctcccacctgaaggagaacaagtacctgatcgtggtgacagac
gggcaccccctggaaggttataaggagccatgtggtggcctggaggatgccgtcaatgag
gccaagcacctgggcatcaaagtcttctcagtggccatcacgcctgaccacctggagccc
cggctgagtatcatcgccaccgaccacacataccggcgcaacttcacagcggccgactgg
gaccagacgagggatgcggaggaggccatcagacagaccattgacaccatcatcgacatg
attaaagataacgtggagcaagtgtgctgctccttcgagtgccagggacctcgtggatcc
aaggaggtgatgcctgagtacgagactgtccctcagctcttccacggtgcccttaacccc
ccaccccgcccccagctccttcaggagcaagaggacaggtgggctgaggcacagggtctg
cctgcccctctgaggtgcctgatgtgcccatcctctctgttccagggaaggccgggggac
ctgggacctgtcggctaccagggaatgaagggagaaaaaggaagccgtggggagaagggc
tcgaggggacccaagggctacaagggtgagaagggcaagcgaggcatcgatggtgtggac
ggcatgaagggggaaactgggtacccaggactgccaggctgtaagggctcacccggattt
gacggcatccaaggacccccggggcccaagggagatcctggcgcattcggactgaaagga
aataagggagagcctggcacggatggagaacctgggaagcaggggagcacggggccccct
ggagatgagggcgagccaggagagccaggtcccccaggagagaaaggagaagctggggat
gaggggaacccaggaccagacggaccccccggggagaggggtggccctggagaaacagga
ccacgggggacacctggcctgaggggccccagaggagacccgggcgaagctggaccccaa
ggtgaccagggaagagaaggcccggtcggcgtccctggggacccggtaaggaccctgcct
attaggtccctggaataccggaccaaaggtctgaccatggcacccactcctcccctctcc
tccatgaccgtgcagtttgagccggggcagtcgcacgcgggtgtggtgcagtacagccac
aaccagatgcaggagcatgtggacctgagcagccccaacatcaggaacacacaggaactg
aaggaagccatcaagaagttgcagtggatggcggggggcacgttcacaggcgaggcccta
cagtacacccgggaccggctgctaccaccctcctcaaacaaccgcattgccctggtcatc
acggacggccgctcagacacccagagggacaccacacccctcaacgtgctctgcagccct
ggcatccaggtggtctccgtaggcatcatggacctgttcggctcctctccgagctctgac
cagctgaacgtcatctcctgccaaggcctgtcatcccaaccccggccaagcatctcaatc
gtcaagaataacttcgcagagctgctggaagacagcttcctgaagaatgtgactgctgag
atctgcatagataagaaatgtccagattacacctgcccaatcacgttctcctccccggcc
gacatcaccatcctgttggacggctcggccagtgtgggcagccacaacttcgagaccact
aagcgttttgccaagcgcctggctgagcgcttcctcacagcgcagcgcggggaccctccc
cacgacgtgcgcgtgtccgtggtgcagtacagcggcacgggccagcagaggcccgaccgg
gcagccctgcagttcctgcagaactacacggtggttgccagcaacgtagacagcatgagc
ttcctcaatgatgccaccgatgtcaccgacgccctgcgctacgtcactcgcttctacaga
gaggcctcttcgggcgctgccaagaagcagctgctgttgttctcagacggcaactcacag
ggcgtcacggccgcagccattgagaaggctgtgcaggaggcccagcaggcaggcattgag
atcttcgtggtggtggtgggtcgccaggtgaacgagcccaacatccgtgtactggtcact
ggcaagacggcggaatatgacgtggcctttggcgagcggcacctgttccgcgtgcccagc
tacgaggccctgcttcggggtgtcttctaccagactgtctccaggaaagtggcgctgggc
tag
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integrated database retrieval system
