Loxodonta africana (African savanna elephant): 100663283
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Entry
100663283 CDS
T04351
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03440
Homologous recombination
lav03450
Non-homologous end-joining
lav04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100663283 (RAD50)
03450 Non-homologous end-joining
100663283 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100663283 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lav03032
]
100663283 (RAD50)
03400 DNA repair and recombination proteins [BR:
lav03400
]
100663283 (RAD50)
DNA replication proteins [BR:
lav03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100663283 (RAD50)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100663283 (RAD50)
BRCA1-C complex
100663283 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
100663283 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
AAA_29
DUF2703
Motif
Other DBs
NCBI-GeneID:
100663283
NCBI-ProteinID:
XP_003405070
UniProt:
G3T4B6
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELLAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITNKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYRNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRY
QEHIRARDSLIRSLATQLELDGFERGPFSERQIKNFHKLVRERQEGEAETANQLMNDFAE
KEALKQKQIDEIRDKKIGLGRIIELKSEILSKKQSELKNVKYELQQLEGSSDRILELEQE
LTKAERELSKAEKNSSVEALKTEVMSLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LSKDKADKDEQIRKIKSRHGDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEDIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTETELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDDMLGLVPMRQSIVDLREKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERLQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQDKQEKQHKLD
TVSSKIELNRKLIQDQQEQVQQLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQVSPLETTLEKFQQEKEELINKKNKSNKIIQDKLNDIKEKVKNIQSYVKD
IENYIQDGKDDYKKQKETELNKVITQLSECEKQKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIETIKRNHSLALGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRELWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYMEKFYRIKKNMDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagccccctcacaattttggttggacccaatggggca
gggaagacgaccatcattgaatgtctgaaatacatttgtactggagatttcccacctgga
accaaaggaaatacatttgttcatgatccaaaggttgctcaagaaacagatgttagagcc
cagattcgtctacagtttcgtgatgtcaatggagaactcttagctgtgcagcggtctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgaaaaagtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggagtttccaagtctgttctaaataacgtcatcttctgtcaccaagaa
gagtctaattggcctttaagtgaaggaaaggctctgaagcaaaagtttgatgagattttt
tcagcaacaaggtatattaaagccttggaaacacttcggcaggtacgtcaaacacaaggt
caaaaagtaaaagaatgtcaaacagaactgaaatatttgaagcaaaataaggaaaaagca
tgtgaaattcgggatcagattactaataaggaagcccagttaacatcttcaaaggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagacttgacaatgaaattaaagctttggagagcagaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtatttcaagggact
gacgagcaactaaatgatttgtatcgcaatcaccagaggacagtaagagagaaagagagg
agattggtagactgtcaacgtgaactggaaaaattaaacaaagaatccaggctgctcaat
caagaaaaatccgaactacttgttgaacagggtcgtctacagctacaagcagatcgctat
caagaacatatccgagccagagattcattgattcggtccttggcaacacagctagaattg
gatggctttgagcgtggaccattcagtgaaagacagattaaaaattttcataaactcgtg
agggaaagacaggaaggggaagccgaaactgccaaccagttgatgaatgattttgcagaa
aaagaggctttgaaacaaaagcagatagatgagataagggataagaaaattggactggga
agaataatcgagctgaaatcagaaatcctaagtaagaagcagagtgagctgaaaaatgtg
aaatatgaattacagcagttggaaggatcttcagacagaattcttgaactggagcaggaa
ctcacaaaagctgaacgtgagctaagcaaggctgagaaaaacagcagtgtagaagcccta
aaaacagaagtaatgagccttcaaaatgagaaagcagacctggataggaccctgcgtaaa
ctggaccaggagatggagcagttaaaccatcataccacaacacgcacccagatggagatg
ttgtccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacggt
gatgaattaacttcgttgttgggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcgaaagaaattaatcagaccagggatagacttgccaaattaaacaaagag
ctagcttcagctgagcaaaataagaatcatataaataatgagctaaaaagaaaagaagaa
cagttatccagttatgaagacaagctctttgatgtttgtggtagccaggattttgaaagt
gatttagacaggcttaaagaggacattgaaaaatcctcaaaacagcgagccatgctggct
ggagccacggcagtttactcccaattcattactcagctaacagatgaaaaccagtcgtgt
tgccctgtctgtcagagagtttttcagacagaaactgaattacaagaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaacttaaatcaacagaatcagagctaaag
aaaaaggaaaagcggcgtgatgacatgctgggacttgtacccatgaggcaaagcatagtg
gacttgagggagaaggagataccagaactgagaaacaaactgcagaatgtcaatagagat
atacagcgtctaaagaatgacatagaagaacaggaaacactcttgggtacaataatgcct
gaagaggaaagtgctaaagtatgtctgacagatgttaccattatggagaggttgcagatg
gaacttaaagatgttgaaagaaagattgcacagcaagcagctaagctacaaggaatagac
ttagatcgaactgttcaacaagtaaaccaggacaaacaagaaaaacaacacaaattagat
acagtttccagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacaggtt
caacagctaaaaagtacaacaaatgaactaaaatcagagaaacttcagatatccactaac
ttgcagcgccgtcagcaactggaggagcagactgtggaattatccactgaagttcagtcc
ttatatagagagataaaggatgctaaagagcaagtaagccctttggaaacaacattggaa
aagtttcagcaggaaaaagaagaattaatcaacaaaaaaaataaaagcaacaaaattata
caggataaactgaatgatatcaaagagaaggttaaaaatattcagagctatgtgaaagac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaactgaactt
aataaagtaataactcaactaagtgaatgcgagaaacaaaaagaaaagataaataaagaa
atggggatcatgagacaagatattgatacacagaagatacaagaaagatggctgcaggat
aaccttactttaagaaagagaaatgaggaactaaaagaagttgaagaagaaagaaagcaa
catttgaaggaaatgggacaaatgcaggttttgcaaatgaaaaatgaacatcagaagtta
gaagaaaaaatagaaactataaaaagaaaccacagtttggcattagggcgacagaaaggt
tatgaagaagaaattattcattttaagaaagaacttcgagaacctcaatttcgggatgct
gaggaaaagtacagagaaatgatgattgttatgagaaccacagagcttgtgaacaaggat
ttggacatttattataagacccttgatcaagcaataatgaaatttcatagcatgaaaatg
gaagaaatcaataaaattattcgtgaactgtggcgaaatacttatcgcggacaagatatt
gaatacatagaaattcggtctgatgctgatgaaaatgtatcagcttctgataaaaggcgt
aattacaactaccgagtggtgatgctaaagggagacacagccttggatatgcggggacga
tgcagcgccggacaaaaggtcttagcctcactcatcattcgcctggccctggctgaaaca
ttctgcttgaactgtggcatccttgccttggatgagccaacaacaaatcttgaccgagaa
aacatagaatctcttgcgcatgctctggttgagataataaaaagccgctcacagcagcgt
aattttcagcttctcgtaatcacccatgatgaagattttgtggagcttttaggacgttct
gaatatatggagaaattctacaggattaagaagaacatggatcagtgctcagagattgtg
aaatgcagtgttagctccttaggatcttatgttcattaa
DBGET
integrated database retrieval system
