Loxodonta africana (African savanna elephant): 100663375
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Entry
100663375 CDS
T04351
Symbol
PRPF6
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100663375 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lav03041
]
100663375 (PRPF6)
Spliceosome [BR:
lav03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100663375 (PRPF6)
Complex C
U5 SnRNP specific factors
100663375 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
Suf
TPR_16
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
FAT
ARM_TT21_2nd
TPR_CcmH_CycH
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
100663375
NCBI-ProteinID:
XP_003421807
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All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHSALECARAIYAYALHVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVXGNIAAAQELCEEALRHYEDFAQLWMMKGQIEE
QQELTDKSRGAYSQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIANTLMAKALQECPHSGILWSEAVFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CENAEPRHGELWCAVSKDIANWQKKIGEVLVLVAARIRNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaaaccgttcctgggcatgcccgcgccgctcggctatgtgccgggg
ctgggccgcggtgccactggttttaccacccggtcggacattggccctgcccgggatgcg
aatgaccctgtggatgaccgccatgctccaccaggcaagaggaccgttggggaccagatg
aagaaaaaccaggctgcagatgacgatgacgaggacctgaatgacaccaactatgatgag
tttaatggctatgctgggagcctcttctcaagtggaccctatgaaaaagatgatgaggaa
gcagatgctatttatgcagctctggataagaggatggatgaaagaagaaaagaaagaagg
gagcaaagggaaaaggaggaaattgagaaataccgtatggaacgtcccaaaatccagcag
cagttctcagatctgaagcggaaactggcagaggtcacggaagaagagtggctgagcatc
cctgaggtgggagatgcccggaacaagcgccagcggaacccgcgttatgagaagctgacc
cctgttcccgatagcttcttcgccaagcatttgcagactggagagaaccacacttcagtg
gatccccgacaaactcaatttggaggtcttaacacaccctaccctggtggattgaacacc
ccatacccaggtggaatgacgccaggattgatgactcctggcacaggtgagctggatatg
aggaagatcggccaagctaggaacacgcttatggacatgaggctgagccaggtatctgac
tcggtgagtgggcagaccgtggtcgaccccaaaggctacctgacggacttgaattctatg
atccccacacatggcggggacatcaatgatatcaagaaggcacgactgctgctcaagtct
gtgcgggagaccaacccccatcacccgccggcctggattgcttcagcccgcctggaggaa
gtcaccgggaagctgcaggtggcacggaacctcatcatgaaggggacagagatgtgcccc
aagagtgaagatgtctggctagaagcagccaggttgcagcctggagacacggccaaggct
gtggtggcccaggcagtccgtcacctcccacagtctgttcggatttatatcagagcagca
gagctggaaacagatattcgtgcgaagaagcgggttcttcggaaagccctggagcatgtt
ccaaactcagtccgtttgtggaaggctgccgtggagctggaggagccggaagatgccagg
atcatgcttagccgtgccgtggagtgctgtcctaccagtgtagagctctggcttgctctg
gcgaggctcgagacctatgaaaatgcccgcaaggtcctaaataaagcccgggagaacatc
cctacagaccggcacatctggatcacagctgccaagctagaggaggccaacgggaacaca
cagatggtggagaagatcattgaccgtgctatcacctctctgcgggccaatggcgtggag
atcaaccgtgagcagtggatccaggacgccgaggagtgtgacaaggctggcagtgtggcc
acctgccaggcggtcatgcgtgctgtgatcggcattgggatcgaggaggaggaccggaag
cacacctggatggaggatgcagacagttgcgtggcccacagtgccctggagtgtgctcgt
gctatctatgcctacgccctgcatgtcttcccgagcaagaagagtgtgtggctgcgagca
gcttactttgagaagaaccacggcaccagggagtccctggaggcgctcctgcagagggcc
gtggcccactgccccaaggccgaggtgctgtggctcatgggcgccaagtccaagtggctg
gcgggagatgtgcctgccgcaagaagcatcctggctctggccttccaggccaaccccaac
agtgaggagatctggctggcagccgtgaagctggagtcagagaacaacgagtatgagcgg
gcccggaggctactggccaaggcgcggagcagtgcgcccacagcccgagtgttcatgaag
tctgtgaagctggagtgggtgnctgggaacattgctgctgcccaggagctgtgcgaggag
gccctgaggcactacgaggactttgcccagctgtggatgatgaagggacaaattgaggag
cagcaggagctgacggacaagtcccggggggcctacagccaagggttaaagaaatgtccc
cactccacacccctgtggcttttgctttcccggctggaggagaaggttgggcagctgacc
agagcaagagctatcctggagaagtctcgtctaaagaacccaaagaaccctggcctgtgg
ttggaatccgtgcggctggagtaccgggcggggctgaagaacattgccaacacgctcatg
gcgaaggcactgcaggagtgcccccactcaggcatcctctggtcagaagcagttttcctc
gaggcccgaccccagaggaagaccaagagtgtggatgctctgaagaagtgtgagcatgac
ccacacgtgctcctggccgtggccaagctgttctggagcgaacggaagatcaccaaggcc
agggagtggttccaccgcaccgtgaagatcgactcggacctgggggatgcctgggcattc
ttctacaagtttgagctgcagcacggcacagaggagcagcaggaggaggtgaggaagcgc
tgcgagaacgcggagccgcggcatggcgagctctggtgcgccgtgtccaaggacatcgcc
aactggcagaagaagattggggaggtgctcgtgctggtggccgcccgcatcaggaacacc
ttctag
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