Loxodonta africana (African savanna elephant): 100663683
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Entry
100663683 CDS
T04351
Symbol
SMC5
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lav03400
]
100663683 (SMC5)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
100663683 (SMC5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_13
AAA_21
AAA_29
XLF_CC
FtsK_SpoIIIE
AAA_25
Motif
Other DBs
NCBI-GeneID:
100663683
NCBI-ProteinID:
XP_010585833
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MATPSRKTLTPSPQVSKRVLPRDRSSEVPSKRKTSVQSTLPPTPLLSPPTPPLLPPPTPL
LLSPPTPLLMPPPTPLPPPRLQSSGPLVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGA
NGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRGCTKGMVEIELFKASGNLVITREID
VAKNQSFWFINKKSTTQRVVEEQIAALNIQVSNLCQFLPQDKVGEFAKLTKIELLEATEK
SVGPPEMYRYHCELKNFREKEKQLETACKEKTDYLEKMIQRNERYKQDVERFYERKRHLD
LIEMLEAKRPWVEYENVRQEYEEVKQARDQVKEEVRKLKEGQIPITHRIDEIEKQRHNLE
ARIKEKATDIKEASQKCKQKQDVLERKDKHIEELQQALIVKQKEEHDRQRRISNTRKMIE
DLQNELKTTENCENLQPQIDAITDDLRRVQDDKALCESEIIDKRSERETLEKEKKSVHDH
IIRFDNLRNQKEDKLRQRYRDTYDAVLWLRNNKDKFKQRVCEPIMLTINMKDNKNAKYVE
NHIPSNDLRAFVFESQEDMEVFLKEVRDNKKLRVNAVIAPSSSYADKAPSRSLSELKQYG
FFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVV
KTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEINRKLHAVDSGLIALRETNK
RLEHKDNELRQKKKDLLERKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIKE
INVQKAKLVTELTNLIKICTSLNMQKVDLILQNTTVISEKNKLESDYMAASSQLRLTEQN
FIELDENRQRLLQKCKELMKRARQVCNLSAEQTVPQEYQTQVPTIPNGHNSSLPMAFQDL
PNTLDEIDALLTEERSRASCFTGLNPTVVEEYTKREEEIEQLTEELKRKKVELDKYRENI
SQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHAENEEDYDKYGIRIRVKFRSST
QLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPDNERKVFEMVVKTA
CKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPYMLEPNKWNLKAFQRRRRRITFTQPS
Q
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgagcagaaagacgttgaccccaagcccccaggtctccaagagagttctt
ccgagagatcgttcatcggaggtcccgagcaagagaaagacttctgtccagtcaacgctg
ccgccaacgccgctgctgtcgccgccaacgccgccgctgctgccgccgccaacgccgctg
ctgctgtcgccgccaacgccgctgctgatgccgccgccaacgccgctgccgccgccacgg
ctgcagtcgtccgggcctttagtggaaggctccatcgtccgcatcgcgatggagaacttc
ctgacatacgatatctgtgaagtatctcctggaccccacttgaatatgattattggagct
aatgggacagggaagtccagcattgtgtgtgccatttgccttggattagcaggcaaacct
gctttcatgggacgggcagataaggttggcttttttgtgaagcggggatgtaccaaaggc
atggttgaaattgaattgttcaaagcttctggaaatcttgtcatcacccgtgagattgat
gtggcaaaaaatcagtccttttggttcatcaacaaaaaatctacaacccagagagtagta
gaagaacagattgcagccttaaatattcaagtgagcaatctttgccagtttctacctcag
gacaaagttggggaatttgctaaactcaccaaaattgaactccttgaggctaccgagaag
tcagttggtcctccagaaatgtataggtatcactgtgaactcaaaaacttcagggagaaa
gaaaaacaactagagaccgcatgcaaagagaagactgactatctagagaaaatgattcag
aggaatgaaagatataagcaagatgtggagagattctatgaacgtaagcgacacttagat
ttaattgagatgcttgaagcaaaaaggccatgggtggaatatgaaaatgttcgtcaagaa
tatgaagaagtaaaacaagctcgtgaccaagtgaaggaagaggtcagaaaacttaaagaa
gggcagattcctataacacatcgaattgatgaaattgaaaaacagcgtcacaatttggaa
gcccgaatcaaagaaaaggcaacagatattaaggaggcatctcagaaatgcaaacaaaag
caagatgttttagagaggaaagataagcatattgaggaacttcagcaggctttaatagta
aaacaaaaggaagaacatgaccggcagaggagaataagcaatacccgaaaaatgatagag
gatttgcagaatgaactgaagaccacggaaaactgtgaaaatctgcagccccagatcgat
gccatcacagatgatctgagacgcgttcaagatgacaaggccttatgtgaaagcgagata
attgataagcgaagtgagagggagactctagagaaggagaaaaagagtgtacatgatcat
attatacgttttgacaatcttaggaatcaaaaggaagataagctgagacagaggtaccgt
gacacatatgatgctgttttgtggctaagaaataacaaagataaatttaagcaaagagtc
tgtgaacccataatgctcacgatcaatatgaaagataataaaaatgccaaatacgttgaa
aatcatattccatcaaatgacttgagagcctttgtatttgaaagccaagaagatatggag
gttttcctcaaagaggttcgtgacaacaaaaaattaagagtaaatgcagttattgctcct
agtagttcatatgcagacaaagcaccttcaaggtctctgagtgaactaaaacaatatggg
tttttctcttatttgcgagagttatttgatgcacctgatcctgtaatgagttatctttgc
tgccaatatcatattcatgaagttcccgtaggaactgaaaggaccagagaaagaattgaa
agggtgatacaggaaacccgattaaaacaaatttatacagcagaagaaaagtatgtggtg
aaaacttctttttattcaaacaaagttatttccagcaacacatccttaaaagtagcccag
tttctcacagtcactgtagatctagagcaaagaagacacttagaagaacagctgaaggaa
attaatagaaaattgcatgcagtggactcaggattgattgccttacgtgagacaaacaaa
cgtctagaacacaaggacaatgaacttagacaaaagaagaaggaccttcttgaaagaaaa
accaagaaaagacaattggaacaaaaaattagttccaaactaggaagtttaaagctaatg
gaacaggatacttgcaaccttgaagaggaagagcgaaaagcaagtaccaaaatcaaagaa
ataaatgtccaaaaagcaaaacttgttactgaattaacgaacctaataaagatttgtact
tctttaaatatgcaaaaagtagatttaattcttcaaaatactacagttatctccgagaag
aacaaattagaatccgattatatggctgcatcttcacaactgcgtctaacagagcaaaat
ttcattgaattggatgaaaataggcagagactattgcagaaatgcaaggaactcatgaag
agagctaggcaagtatgtaacctcagtgcagagcagaccgttcctcaggaataccagaca
caagtacccaccattccaaatggacacaactcctcactccccatggccttccaagatctt
cccaacacactggatgaaattgatgctttattaactgaagaaagatcaagagcatcttgc
ttcacaggactaaatcctacagttgttgaggaatacacaaaaagagaagaagaaatagaa
cagttaactgaggaactaaagagaaagaaagttgaactggataaatatagggaaaacatt
tcacaggtaaaagagaggtggctaaatcccttaaaagagctggtagaaaaaattaatgag
aagttcagcaatttttttagttccatgcagtgtgctggtgaagttgatctccatgcagaa
aatgaggaagactatgataaatatggaattcgaattagagtcaaatttcgtagtagtact
caactgcatgaattaactcctcatcatcagagtggaggtgaaagaagtgtttctaccatg
ttatacttgatggcacttcaggagcttaatagatgtccattcagagtagttgatgaaatc
aatcagggaatggacccagacaatgaacggaaggtatttgaaatggttgtaaagactgcc
tgtaaggaaaacacatctcaatacttctttattacaccaaagctcctgcagaatcttcct
tattctgaaaagatgactgtattatttgtctacaatggtccttatatgctggaaccaaac
aagtggaatttaaaggctttccagaggcggcggcgccgtattacattcactcaaccttct
caataa
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