Loxodonta africana (African savanna elephant): 100664028
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Entry
100664028 CDS
T04351
Symbol
ATG16L2
Name
(RefSeq) autophagy-related protein 16-2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100664028 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100664028 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
lav03029
]
100664028 (ATG16L2)
Membrane trafficking [BR:
lav04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100664028 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
100664028 (ATG16L2)
Mitochondrial biogenesis [BR:
lav03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100664028 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ATG16
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
100664028
NCBI-ProteinID:
XP_023394757
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MAYQVVEKSAALGTLGSELEQRQSRLAALEASAAQLKEARAQLAEQVEAWQTLNAAQLAA
YDQLRAHAGLQEAALRRLEEEARDLLEKLVQRKARAAAERNLRNERRERAKQAQVSQELK
KAAKRTVSISENPDTLGDGVRERAETLALPPEPESQEREACEKWKRSFRSASATSLTLSR
CVDVVKGLLDFKKRRGHSVGGAPEQRYQSIPVCVAARLPTRAQDVLDAHLSEVNAVCFGP
NSSLLATGGADRLIRLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNRAAQL
WKVGETQSKETLSGHTDKVTAAKFKLTRHHAVTGSRDRTVKEWDLGRAYCSRTINVLSYC
HDVVCGDHIIISGHNDQKIRFWDSRGPHCTQVIPVQGRVTSLSLSHDQLHLLSCSRDDTL
KVIDLRVSNIRQVFRADGFKCGSDWTKAVFSPDRSYALAGSWDGALYIWNVDTGKLESSL
RGPHCAAVNAVAWCYSGSHVVSVDQGRKVVLWH
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccaggtggtggagaagagcgcagccctgggcaccctgggatcggagctggag
cagcggcaaagcaggctggcggccctggaggccagcgccgctcagttgaaggaggcgcga
gcgcagctggcagagcaagtggaagcctggcaaacgctgaatgcagcgcagcttgcggcc
tacgatcaactgcgcgcgcacgccgggctccaggaggcggcactgcgcagactcgaggag
gaggcgcgcgacctgctggagaagcttgtgcagcgcaaagcgcgcgccgcagccgagcgc
aacctgcgcaacgagcgccgggagagagccaagcaggcgcaggtctcccaggagctgaag
aaggccgccaagcggactgtgagcatcagcgagaacccagacacactcggtgatggggtc
agggagagggcagagactctggccctgccacctgagccagagtcccaggagagagaggct
tgtgagaagtggaagaggtccttcaggtctgcctctgccacctccctgacgctgtcccgc
tgtgtggatgtggtgaaaggtcttctggatttcaagaaaaggagaggtcattcagttggg
ggagcccctgagcagcgataccagagcattccggtgtgcgttgctgcccgacttcctacc
cgggctcaggacgtgctggatgcccacctctctgaggtcaatgctgtttgttttggcccc
aatagcagcctcctggctactggaggggctgaccgccttattcgcctctggaatgttgtg
ggaggtcgcctggaggctaaccagacccttgagggagctggtggcagtattaccagtgtg
gacttcgacccctcgggctcccaggtattggcagccacttacaaccgggctgcccagctc
tggaaggtgggggagacacagtccaaggagacactgtctggacacacagacaaggtgaca
gctgccaaattcaagctaacaagacatcatgcagtgactggaagccgagaccgaacagtg
aaggagtgggatcttggccgtgcttactgttccaggaccatcaacgtcctttcctactgt
catgatgtggtgtgtggggatcatatcatcattagtggccacaatgaccagaagatccga
ttctgggacagcaggggaccccattgtacccaggtcatccccgtgcagggccgggttacg
tccctgagcctcagccatgaccagctgcatctgctcagttgttcccgtgacgacactctc
aaggtcattgacctgcgtgtcagcaatatccgccaggtgttcagggccgatggcttcaag
tgtggttctgactggaccaaagctgtgttcagcccagacagaagctatgcactggcaggt
tcctgggatggagccctttatatctggaatgtagacactgggaaactggagagcagcctt
cgggggccccactgtgctgctgtcaacgccgtggcctggtgctactccgggagccacgtg
gtgagcgtggatcagggcaggaaggttgtgctctggcactag
DBGET
integrated database retrieval system
