Loxodonta africana (African savanna elephant): 100664375
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Entry
100664375 CDS
T04351
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100664375 (TAF1B)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100664375 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF2031
CoV_NSP2_N
NSRP1_N
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
100664375
NCBI-ProteinID:
XP_003411929
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MDLDEAKEFKERCTQCAAVSWGLTDEGKYYCTSCHNVTEISKEVINTGDIPNTKIQAINR
GLKRKRKLEKGWDWYVCEGFQCILCQQAEALKTLGVGPELKNEVLHNFWKRYLQKSKQAY
CKNPIYTSRRKAVVLEENLSHSDWESEPELLSDFSFPFVESGAESQSDVNTQKSFPVIKA
SQSETASVCSGSLDGVEYSRRKEKGIVKMTMPRTLAFCYLSLLWQRETITLSDLLRFVEE
DHIPYINSFQHFPEEMKLYGRDKGIFAIESWPDYEDIYKKTIEVATFLDLPRFPDITEDC
YLHPNILCMKYLMEVNLPDEMHNLTCQVVKLTGIGEVDFLTFDPIAKMAKTVKYDVQAVA
IIIVVLKLLFLLDDNLEWSLSNLAEKHNEKNKEDNPWFDFRKWYQVMKRTVDEKKQKWEE
ARAKYIWKSEKPVYHSSIDKSVVYKRREMVVSLQKQFSTLVDSTPTVGKKSPSSFQFSWS
EEDTDRTCFHGHSLQGILKKKDQSLTTKNSLYWLSTQKFCKSYCKHVTTYEESNYSLSYQ
FILNLFSFLLRIKTSFLHEEVSLVEKKLFKTKYSKTKKKSSRSRKVRRY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggacctagacgaggcgaaagagttcaaagaacgctgtactcagtgtgctgccgtctct
tggggtcttactgatgaaggcaaatattattgtacttcttgccacaatgttacagaaata
tctaaggaagttataaacactggggatattccaaataccaagatacaagccatcaatcgg
ggacttaaaagaaaaagaaaacttgagaaaggctgggactggtatgtgtgcgaaggtttt
cagtgtatactttgtcaacaagcagaagccttgaagacccttggagtaggcccggagtta
aagaatgaagttttacataatttttggaagcgctaccttcaaaagagcaagcaggcatat
tgtaaaaacccaatttataccagtagaaggaaagctgtggtattagaagagaatctaagt
cattcagactgggagagtgagcctgagctgctaagtgactttagctttccttttgttgaa
agtggagcagaatctcagtctgatgtcaacactcaaaagtcttttcctgtcatcaaagca
tcacaatccgagacagcatcggtctgttctggatctcttgatggagtcgaatattcaaga
cgaaaggaaaagggaattgtgaagatgactatgccaaggacgcttgccttctgctatctg
tcattactttggcagagagaaacaattactctttcagatcttttgagatttgttgaagag
gaccatattccttacataaacagttttcagcattttccagaagagatgaaattatatggg
cgtgacaaaggaatctttgccatagagtcttggcctgactatgaggatatctataaaaaa
actattgaagttgccacatttttagatttgcctcgttttccagacataactgaggactgc
tatctacatccaaacatcttgtgtatgaaatacttaatggaagtcaatctacctgatgaa
atgcacaatttaacctgccaagtggtaaaactaactggaataggagaagtggattttttg
acatttgatcctatagctaaaatggcaaaaactgttaaatatgatgtacaagctgtagct
atcattatagtagtactgaaacttctctttttattggatgacaatttagaatggtcttta
tctaatcttgctgaaaaacataacgaaaagaacaaagaagataacccatggtttgatttc
agaaagtggtaccaagtaatgaagagaactgttgatgagaaaaaacaaaaatgggaagaa
gccagagccaagtacatatggaaaagtgaaaagccagtctaccactcatccatcgataag
tcagtggtatacaaaagaagagaaatggtagtgagtctacagaaacaatttagcacactg
gttgattcaacaccaactgttggaaaaaaaagcccttcaagttttcagttcagctggtct
gaagaagacactgatagaacttgtttccatggacatagcctccagggaatcctgaaaaag
aaagaccagtctctgacaaccaagaattcactgtattggcttagtacacagaaattctgt
aaaagctactgtaaacatgtgacaacctatgaagaatcgaattattctctgagttatcaa
tttatactaaatcttttttccttcctcctaagaataaagacgtcctttctccatgaagaa
gtgagcttagttgaaaagaaactttttaaaacaaaatacagtaaaacaaaaaagaaatct
tcaagatccagaaaagtgagaagatattga
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