Loxodonta africana (African savanna elephant): 100664585
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Entry
100664585 CDS
T04351
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04140
Autophagy - animal
lav04142
Lysosome biogenesis
lav04145
Phagocytosis
lav04148
Efferocytosis
lav05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
100664585 (VPS18)
04142 Lysosome biogenesis
100664585 (VPS18)
04140 Autophagy - animal
100664585 (VPS18)
04148 Efferocytosis
100664585 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100664585 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100664585 (VPS18)
Membrane trafficking [BR:
lav04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100664585 (VPS18)
Hops complex
100664585 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
100664585
NCBI-ProteinID:
XP_003418711
UniProt:
G3TDT2
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVQQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLFRIDLGKANEPNHVELGRKDDARVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFISRAAEGAE
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLAGL
KPTERTQATLLTTWLTELYLSRLGALQGDPEASTLYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDSEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLTRHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLVYLEQAGASPRRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEDDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAQPLAKGSARAQEAEGGAAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggatgagtacgaggactcgctgtcccgctcggcggtccagcagccc
ggctgccctagcgtgggcatcccccactctggctatgtgaatgcccagctggaaaaggag
gtgcccatcttcacgaagcagcgcatcgacttcaccccttctgagcgcatcaccagtctt
gttgtctcttgcaatcagctctgcatgagcctgggcaaggatacgctgttccgcattgac
ttgggcaaggccaatgagcccaaccacgtggagctggggcgcaaggacgatgccagagtt
cacaagatgttcttggaccacactggctctcacctgctgattgctctgagcagcactgag
gtcctctacgtgaaccgtaatggacagaaggtgcggccactggcacgttggaaggggcag
ctggtggagagcgtgggctggaacaaggcgctgggtaccgagagcagcacaggccccatc
ctggtcggcaccgcccaaggtcagatcttcgaagcagagctctcagccagcgagggtgga
ctttttggcccggcccccgatctctacttccgtccactgtacgtgctgaatgaagaaggg
ggtccagcacccgtgtgctccttggaggctgagcggggccctgatgggcgtggttttgtt
attgccaccactcggcagcgcctcttccagttcataagccgagctgccgagggggctgag
gcccaagggttctcggggctctttgctgcctacactgaccacccacccccattccgtgag
ttccccagcaatctgggatacagtgagttggccttctatacccccaagctgcgctctgcg
ccccgggcctttgcctggatgatgggggacggtgtgttatacggagcgctggactgtggg
cgtccagactccctgctgagtgaggagcgagtctgggagtacccggagggggtgggtcct
ggggccagcccacccctggccatcgtcttgacccagttccacttcctgctgctgctggcg
gaccgggtggaggcggtgtgcacactgacagggcaggtggtgctgcgggatcacttcctg
gagaagtttgggcctctgaagcacatggtgaaggactcgtccacgggccagctgtgggcc
tacactgagcgggctgtcttccgctaccacgtgcagcgagaggcccgggatgtctggcgc
acctacctggacatgaaccgcttcgatctggccaaagagtattgtcgagagcggcctgac
tgcctggacacagtcctagcccgtgaagccgatttctgctttcgccagcgtcgatacctg
gagagcgcccgctgttacgccctgacccagagttactttgaagagattgccctcaagttc
ttggaggcccgacaggaggaggctttggctgagtttctccagcggaaactggccggtttg
aagccaactgagcgtacccaggccacactgctcaccacctggctgacagagctctacctt
agccggcttggcgcgctgcagggcgacccagaggcctcgaccctttaccgggaaacacgg
gagcgcttccgtgccttcctcagcagcccccgccacaaggagtggctctttgccagccgg
gcctccatccacgagctgctcgccagccatggggactcggagcacatggtgtactttgca
gtaatcatgcaggactacgaacgggtggtggcgtaccactgccagcatgaggcctacgag
gaggccctggctgtgctcacccgccaccgtgacccccagctcttctacaagttctcaccc
atcctcatccgccacataccccgccagctggtggacgcttggattgagctgggcagccgg
cttgatgccaggcagctcatccctgccctggtgaattatagccagggtggtgaggcccag
caggtaagccaggccatccgctacatggagttctgtgtgaacgtgctgggcgagaccgag
caggccatacacaactacctgctgtcactgtatgcccgcggccagcctgcctcactgctg
gtctacctggagcaggcaggggccagcccacgccgtgtgcattacgacctcaagtatgcg
ctgcggctctgtgctgagcatggccaccaccgcgcctgcgtccacgtctacaaggtcctg
gagctgtacgaggaggctgtggacctggcactgcaggtggacgtggacctggccaagcag
tgcgcggacctgcccgaggacgatgaggagctgcgcaagaaactctggctgaagatcgcg
cggcacgtggtgcaggaggaggaggacgtgcagacggccatggcctgcctggccagctgc
cccctgctcaagattgaggacgtgctgcccttctttcccgacttcgtcaccatcgaccac
ttcaaggaggccatctgcagctcgcttaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggccacagccagcgcccagcgcatccggcgagacctgcaggagctg
cgaggccgctacggcaccgtggagccccaggacaaatgtgccacctgtgacttccccctc
ctcaaccgccctttttatctcttcctctgtggccacatgttccatgctgactgcctgctg
caggccgtgaggcctggcctgcctgcctataagcaggcccggctggaggagctgcagcga
aagctgggggctgctcaacccctggccaagggctctgcccgggcccaggaggcagagggt
ggggccgcagctgggggccccagccgggagcagctcaaggctgacctagatgagctggtg
gccgctgagtgcgtgtactgcggggagctgatgatccgttccattgaccggcccttcatt
gatcctcagcgctacgaggaggagcatctcagctggctgtag
DBGET
integrated database retrieval system
