Loxodonta africana (African savanna elephant): 100664654
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Entry
100664654 CDS
T04351
Symbol
RRP9
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lav03009
]
100664654 (RRP9)
Ribosome biogenesis [BR:
lav03009
]
Eukaryotic type
90S particles
Other 90S particles
100664654 (RRP9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
DUF2357
Motif
Other DBs
NCBI-GeneID:
100664654
NCBI-ProteinID:
XP_003410123
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSATVAARKRGKPASGIGAGSGAGKRRRKADSAGARDKAKGGGKMNEEISSDSESESLAP
RRTEEEEEEELEETVQEKKLRLAKLYLEQLKQQEEEKAEARAFEEDQVAGRLKEDVLEQR
GRLQKLVAKEIQAPAPAEIQVLRGHQLSITCLVITPDDSAIFSAAKDCTIIKWSRESGRK
LHVIPRAKKSAEGQPLGHSSHILCMAISSDGKYLASGDRSKLILIWEAESCRHLYTFTGH
RDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTA
GGRDGTVRVWKIPEESQLVFYGHQGSIDCIQLINEEHMVSGADDGSVALWGLSKKRPLAL
QREAHGLRGEPGLEQPFWVSSVAALLNTDLVATGSHSSCVRLWQCGEGFRRLDHLCDIPL
VGFINSLKFSTAGDFLVAGVGQEHRLGRWWRIKEARNSICIIPLRRPPXPPAAGS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgacagtggcggctcgcaagcggggaaagccggcctcgggaatcggcgccggt
tcaggggccggcaagcggcggcggaaggccgattctgctggggccagggacaaggccaag
ggtggcggaaagatgaatgaggaaatctccagtgattctgagagcgagagcctggctcca
aggaggactgaggaggaggaggaagaggagctggaggagaccgtgcaggagaagaagctg
cgcttggccaagctctaccttgagcagctcaagcagcaagaggaggagaaggctgaggcc
cgtgcgtttgaggaggaccaggtggcagggcggctaaaggaggatgtgcttgagcagagg
ggcaggcttcagaagttggtggcaaaggagatccaggccccagccccggccgaaattcag
gtcttgcggggccaccagctctctatcacctgtttggtcatcacccccgatgactcagcc
attttctctgccgccaaggactgcaccatcattaagtggagcagggagagtggacggaag
ctgcatgtgattcctcgagctaagaagagtgctgagggacagccgctaggccacagtagc
cacattctctgcatggctatctcctccgatggcaagtaccttgcctcaggcgaccgcagc
aagctcatccttatctgggaggctgagagctgccggcacctgtataccttcacaggacac
cgggatgccgtgtcggggctggcgttccgcagaggcactcaccagctctatagcacatcc
catgaccgttctgtgaaggtgtggaacgtggcggagaactcctacgtggagacgctcttc
gggcaccaggatgcagtggctgcactagatgcactgagccgggagtgctgtgtgacagct
ggaggccgggatgggaccgtgcgggtgtggaagatccctgaggagtcccagcttgtcttc
tatggccaccagggctccatcgactgcatccagctcatcaacgaggagcacatggtgtcg
ggcgcagacgacggctctgtggccttgtggggcctctccaagaagcggccacttgccctg
cagcgtgaggcccatgggctgcggggggagccgggcctggagcagcccttctgggtgtcc
tcggtggccgccctgctcaacacagacctcgtggccacaggctcgcacagctcctgcgtg
cggctctggcaatgcggggagggcttccggcggctggaccacctctgcgacatccccctg
gtgggctttatcaacagcctcaagttctccaccgcaggggacttcctggtggctggggtg
gggcaggagcacagactcggccgatggtggcggatcaaagaggctaggaactccatctgt
atcatccctctccgcaggcctccgntgcccccggctgctggctcgtga
DBGET
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