Loxodonta africana (African savanna elephant): 100664680
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Entry
100664680 CDS
T04351
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X8
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04612
Antigen processing and presentation
lav05145
Toxoplasmosis
lav05152
Tuberculosis
lav05164
Influenza A
lav05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100664680 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100664680 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
100664680 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100664680 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
100664680 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lav01001
]
100664680 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lav04054
]
100664680 (CIITA)
Enzymes [BR:
lav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100664680 (CIITA)
Protein kinases [BR:
lav01001
]
Serine/threonine kinases: Other
TAF1 family
100664680 (CIITA)
Pattern recognition receptors [BR:
lav04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100664680 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
AAA_16
AAA_22
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
100664680
NCBI-ProteinID:
XP_010595614
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MELGPLQGGYLELLNSNADPLQLYHLYDQKDLAGEEEIDLCSEPDTDTINCDQFSRLLRE
MEGDEETREAYANIAELDQYVFQDSQLEGPTKDIFIEHMGSEEVGSDSVEAPAEAGQKSH
KRPFPEELPVDPKHRKIAESTSRPTVIGSFLVGLGSDSSALSCLRLPLMLNQEPAPDPTW
LEETVQMPVPPSRPLFSCLNLPAGPIQIIPTIPTLPQGLCQISGAGAGVSSILIYHGELP
QASQAPPSSNPAVHSLPKSPDRPGSTSPFAPSAADLPGMPEPALTSRTNRTEDKLFPTQC
PADLEVSGKIPKRSEAVERFCHLLRDRYLSEPAGLDGILVEVELVRARLERSSNKGQERE
LATQDWSERQRAREGLAEVLLAAGDHRRRRETQVIAVLGKAGQGKSCWARAVSRAWARGQ
LPQYDFVFYLPCPCLDHPGDTYRLQDLLFSLGPQPSPTDEEVFRHILRWPDRVLLILDAF
EELEAQDSFLHSACGPPPTEPRSLRGLLAGLFQRKLLRGCTLLLTARPRGRLAQSLAKAD
SLFEMAGFSAEQAEAYVMGYFERSAEHQERALKLIRGQSFLFSHSHSPTLCQAVCRLCEA
LVGLDERAQLPSTLTEVFVSLLSPAARDGPPGALMKLAKLAWELGRGHRSTLEEAQLPSA
EVKAWAMVKGLVQACPGAPGAELAFSSFLLQCFLGAVWLALSSEIKDKELPQYLALTPRK
KRPYDNWLEGVPCFLAGLIFQPYSHCLGALAGPAAATQVDRKQKVLMRYLKRLQPGTLPA
GRLLELLHCVHEARDAGLWQHVVCGLPAHLSFLGTRLTPSDTHMLGRALEAAGHDFSLDL
RSTGIDPPGLQSLVGLSCVSRFRAGLSDTVGLWESLQQRGEAKLLQAAEEKFTIEPFKAM
SLKDVEDLGNLVRIQRTRSPTEDAAGELPAVRDLKKLEFALGPVSGPQAFPKLVMILTAF
SSLQHLDLDSLSENKIGDKGVAQLSTTFPQLKALETLNLSQNNITDVGACKLAEALPSLA
ASLLRLSLYNNCICDVGAKSLAHVLPDMVSLRVLDVQYNKFTAAGAQQLTASLKKCPHVE
TLAMWTPTIPFGVQEHLQQLDSRISLR
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggagttgggacctctccaaggtgggtacctggagcttctcaacagcaacgctgacccc
ttgcagctctaccacctctatgaccagaaggatctggctggagaagaagagattgatctc
tgttcagagcccgacacggataccatcaactgtgaccagttcagcaggctgttgcgggag
atggaaggtgatgaagagaccagggaggcttatgccaatattgcggaactggaccagtac
gtgtttcaggactcccagctggagggcccaaccaaagacattttcatagagcacatggga
tcagaagaagtgggcagtgacagcgtggaagcaccggcggaagcagggcagaaaagtcac
aaaagacctttcccagaggagctgcctgtggacccgaagcacaggaagatagctgagtcc
acctctagacccacagtgattggcagcttcctggtggggctggggagcgactcctcggcc
ttgtcctgcctgcggttgcctcttatgctcaaccaggagccagcacccgacccgacctgg
ctggaagagactgtccagatgcctgtgcccccttccaggcccttgttcagctgcctgaat
ctccctgctggacccatccagatcatccccaccatcccgactctgccccaggggctctgt
cagatctcaggggctggggctggggtctccagcatactcatctaccacggcgagttgccc
caggccagccaagcgcccccttccagcaacccagctgtccacagcctcccgaagtccccc
gatcggcctggctccaccagcccctttgccccatctgccgccgacctgcctggcatgccc
gaaccagccctgacctcccgcacaaacaggacagaggacaaactgttccccacccaatgc
ccagcagatcttgaggtctccggcaagattccaaaacggtccgaggcggtggagcgcttc
tgccacttgctgcgggaccggtacctgtctgagcccgcaggcctggatggcatcctggtg
gaggtggagctggtgcgggcgcggctagagaggagcagcaacaagggccaagagagggag
ctggccacccaggactggtcagagcggcagcgggcccgcgagggtctggcggaggtgcta
ttggctgctggtgaccaccgacggcggcgtgagacacaggtgattgccgtgctggggaag
gcagggcagggtaagagctgctgggcccgggctgtgagccgggcctgggcccgtggccaa
ctgccacagtacgacttcgtcttctacctgccctgcccctgtttggaccatccgggggac
acctaccgcctgcaggatctgctcttctccctgggcccacagccatcacctacggacgag
gaggtcttccgtcacattttgaggtggcccgaccgtgtgctgctcatcctggatgccttt
gaggaacttgaagcccaagacagcttcctgcacagtgcatgtggccccccgcccacagaa
ccccgctcccttcgggggctgctggccggcctcttccagcgcaagctgctccggggctgc
acgctgctgctcaccgcccggccccggggccgccttgcccagagcctggccaaggccgac
agcctgtttgagatggccggcttctccgctgaacaggctgaggcctacgtgatgggctac
tttgaacgttcagctgagcaccaagaaagggccctgaagctcatccgtggccagtcgttc
ctcttcagccacagccacagccccacactgtgccaggcagtgtgccggctctgtgaggcc
ctggtggggctggacgagagggcccagctgccctccacgctcacagaggtctttgttagt
ctgctaagcccggctgcccgggatggacccccaggggccctgatgaagctggccaagcta
gcctgggagctgggccgagggcaccgcagcaccctggaggaggcccagctcccgtcggca
gaggtcaaggcctgggccatggtgaaaggcctggttcaagcctgcccgggggctccgggg
gccgagctggccttctccagcttcctgctgcagtgcttcctgggagccgtgtggctggcg
ctgagcagcgaaatcaaggacaaggagctgccacagtatttggcattgaccccacgcaag
aaacggccttatgacaactggctggagggcgtgccatgcttcctggctgggctgatcttc
cagccgtactcccactgcctgggagccctggctgggccggcagcagccacgcaggtagac
aggaagcagaaggtgctcatgaggtacctgaagcggctacagcctgggacattgccggcc
gggcggctgctggagctgctgcactgcgtccacgaggcaagggatgctgggctctggcag
cacgtggtgtgtgggctcccagcccacctctccttcctgggcacccggctcacaccctct
gacacccacatgctgggcagggccttggaggcggctggccatgacttctccctggacctc
cgcagtactggcattgacccccctggactgcagagcctcgtgggactcagctgtgtctcc
cgtttcagggctggcctgagtgacacggtggggctgtgggagtccctgcagcagcgtggg
gaggccaagctactccaggcagcagaggagaagttcaccatcgagcctttcaaggctatg
tccctgaaggacgtggaagacctgggcaacctcgtgcggatccagaggacaaggagtccc
acagaagatgctgctggggaacttcctgctgtccgggacctaaagaagctggagtttgcg
ctgggccctgtctcaggccctcaggctttccccaaactggtgatgatcctcacagccttt
tcttccctccagcacctggacctggactcactgagtgagaacaagattggggacaaaggt
gtggcacagctctccaccaccttccctcagctcaaggctctggaaacgctcaacctttcc
cagaacaacatcactgacgtgggtgcctgcaagcttgctgaagccctgccctcactggct
gcatccctcctcaggctgagcctgtacaataactgcatctgcgatgtgggagccaagagc
ctggcccacgtgcttcctgacatggtgtccctccgggtgctggatgtccagtacaacaag
ttcacggctgctggggcccagcagctcactgccagcctgaagaagtgccctcatgtggag
acgttggcgatgtggacacccaccatcccatttggtgtccaggagcacctgcagcagctg
gactcacggatcagccttcggtga
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integrated database retrieval system
