Loxodonta africana (African savanna elephant): 100664848
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Entry
100664848 CDS
T04351
Symbol
TRIM71
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100664848 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100664848 (TRIM71)
04121 Ubiquitin system [BR:
lav04121
]
100664848 (TRIM71)
Enzymes [BR:
lav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100664848 (TRIM71)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100664848 (TRIM71)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100664848 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
SGL
ANCHR-like_BBOX
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
100664848
NCBI-ProteinID:
XP_010593889
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MFPVCLAPPPPPPLPRAPSQHSGGKEEEEEVNEEEAAKQRKRGYARARTRPELGGVVKVP
GDPGTASCDEGNAASSRCLDCQETLCDNCVRAHQRVRLTKDHYIERGPPGPAAAAAAAQQ
LGLGPPFPSSPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRECTMGRHGGHSFTY
LQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKLVHSEVKAVTARHKK
ALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQVLEEGRALDILLA
RDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVSSGAFAPLTKATGDG
LKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEVNDQQNGTYVVSYR
PQLEGEHLVSVTLCNQHIENSPFKVVVKSGXSYVGIGLPGLSFGSEGDSDGKLCRPWGVS
VDKEGYIIVADRSNTRIQVFKPCGTFHHKFGALGSRPGQFDRPAGVACDASRRIVVADKD
NHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGRILVSDTRNHRIQLFGPDGVF
LNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQ
FLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGSQGSGFGQMDRPSGIAVTPDG
MIVVVDFGNNRILIF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgtttgcctggcgccccctcccccgcctcccctccctcgagccccctcccag
cactccggcggaaaggaggaggaggaggaggtgaacgaggaagaggcggcaaagcagaga
aagagggggtacgcgcgcgcgcgcacgcggcccgaattggggggtgttgtgaaagtccca
ggagacccgggcaccgcctcgtgcgatgagggcaacgcagcctcgtcgcgctgcctcgac
tgccaggaaaccctgtgtgacaactgcgtccgcgcgcatcagcgcgtgcgcctcaccaag
gaccactacattgagcgcggcccgccgggtcctgccgccgctgcggccgcggcgcagcag
ctcgggctcgggccgcctttccccagctcgcccttttccatcctctcggtgtttcccgag
cgcctcggcttctgccagcaccacgacgacgaggtgctgcacctgtactgtgacacttgc
tcggtgcccatctgccgtgagtgcaccatgggccggcacggaggccacagcttcacctac
ctccaggaggcgctgcaggactcaagggcgctcaccatccagctgctggccgacgcccag
cagggccgccaggcaatccagctgagcatcgagcaggcccaggcggtggcagagcaggtg
gagatgaaggccaagctggtgcactcggaggtcaaagcggtgaccgcaaggcacaagaag
gccctggaggagcgagagtgcgagctgctgtggaaggtagagaagatccgccaggtgaaa
gccaagtctctgtacctgcaggtggagaagctgcggcagaacctcaacaagctcgagagc
accatcagcgccgtccagcaggtcctggaggagggcagggcgctggacatcctgctggcc
cgagaccgcatgctggcccaggtgcaggagctgaagaccgtgcggagcctcctgcagccc
caggaagatgaccgggtcatgttcacgccccccgaccaggccctgtacctggccatcaaa
tcctttggctttgtcagcagtggtgcctttgcaccgctcaccaaggccacgggtgatggc
ctcaagcgggccctccagggtaaggtggcctccttcactgtcattggttatgaccatgat
ggggagccccgtctctcagggggcgacctgatgtctgctgtggtcctgggccccgatggc
aacctttttggagcggaggtgaatgaccagcagaacgggacttacgtggtgagctaccgg
ccccagctggagggcgagcacctggtgtccgtcaccctgtgcaaccagcacatcgagaac
agccccttcaaggtggtggtcaagtcaggcngcagctacgtgggcatcgggctcccgggc
ctgagtttcggcagcgagggagacagcgacggcaagctttgccgcccatggggcgtgagc
gtggacaaggagggttacatcattgtcgctgaccgcagcaacacccgcatccaggtattc
aagccctgtggcaccttccaccacaagttcggtgccctgggctcccggcctgggcagttt
gaccggccggccggggtggcctgcgacgcctcacgcaggatcgtggtggcggacaaggac
aatcaccgcatccagatcttcaccttcgagggccagttcctcctcaagtttggtgagaag
ggaaccaagaacgggcagttcaactacccctgggacgtggcagtgaattccgagggtagg
atcctggtctcagatacacggaaccaccggatccagctgttcgggcccgacggggtcttc
ctgaataagtatggcttcgagggggctctctggaagcactttgactccccacgaggggtg
gccttcaaccacgagggccacttggtggtcaccgacttcaacaaccaccgcctccttgtc
attcaccccgactgccaatctgcacgcttcctgggctctgagggcactggcaacgggcag
tttctgcgtccacagggcgtggccgtggaccaggaaggccgcatcatcgtggccgactcc
aggaaccaccgggtacagatgtttgagtccaacggcagcttcctgtgcaagtttggctct
cagggcagtggcttcgggcagatggaccgcccctccggcatcgccgtcacccccgacggg
atgatcgtcgtggtggactttggcaacaatcgaatcctcatcttctaa
DBGET
integrated database retrieval system
