Loxodonta africana (African savanna elephant): 100664887
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Entry
100664887 CDS
T04351
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100664887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100664887
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100664887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
100664887
NCBI-ProteinID:
XP_023396487
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MAALGSSSQNVTEYIVRVPKNTTKRYNIMAFNAADKVNFATWNQARLERDLSNKKIYQEE
EMPESGAGSEFIASSWEEARREYGIVLRSSLEDSPGCSRQRKPVDSSPECRTAGSPGSGP
AVHRKGRMGPGFDRIVAVSWRGYLGAAQGLAAHSRRAESPGFSSEKPSGLCRGHGSRGQR
QGWGQMGAGPSPTGQAVTVASHRFKGVKKGGVTENTSYYIFTQCPDGAFEAFPVHNWYNF
MPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLKDQDQDDDEEEKEKRGRKKASELR
IHDLEDDLEMSSDDSEASGEEGGRAPKAKKKAPLGKAGRRKKKKASTTRPLEDSDDGDFE
DKRXDYMSDGSSSSQDEMEGKPKVTKQEEGPKGVDEQSESSAESEEEKPPEEDKEEEEER
KAPTPQEKKRRKDSSDESDSSEESDIDGEASSALFMAKKKTPPKRERKPSGGSSRGNSRP
GTPSTEGSNTSSTLWAAASKLEQGKRTSDMPTAKRLRMDAGPQGLSGKSTPQPQSGKSTP
SSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKKTGLSSEQTVNVLAQILKRLNPERKMV
NDKMHFSLKE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctaggctccagcagccagaatgtcaccgagtatattgtccgagttcccaaa
aacacgacgaagagatacaacatcatggccttcaatgcagctgataaagtcaactttgct
acttggaatcaggcgcggctggagcgggacctgagcaacaagaagatttaccaggaggag
gagatgcccgagtcgggcgcgggcagcgagttcatcgcaagctcctgggaggaggcgcgc
agagagtacggcatcgtcctcaggagttcgctggaggacagccctggctgctcgcgtcaa
cgcaagccggtcgacagcagccctgagtgccgcactgcaggaagcccaggcagtggccct
gctgtgcacagaaaggggcgcatggggccggggtttgaccggattgtggcagtgtcctgg
agggggtatctgggggctgcccagggcctcgcagctcattctcgcagagccgagagtcct
ggcttttcctcagagaagccaagtgggctctgtagaggacacgggtctagggggcagagg
cagggctgggggcagatgggggctggtcccagtcccacaggccaggccgtgactgtggct
tcccacaggttcaagggcgtgaagaaggggggcgtgacagagaacacgtcttactacatc
ttcacccagtgccccgacggcgccttcgaggccttcccggtgcacaactggtacaacttc
atgccgctggcccggcaccgcacgctgaccgccgaggaggcagaggaggagtgggagagg
aggaacaaggtcctgaaccacttcagcatcatgcagcaacgtcggctcaaggaccaggac
caggatgacgatgaggaggagaaggagaagcggggccgcaagaaggccagcgagctgcgc
atccacgacctggaggacgacttggagatgtcgtcagacgacagcgaggccagcggcgag
gagggcggcagagcccccaaggccaagaagaaggcgccgctgggcaaggcgggcaggagg
aagaagaagaaggcttcgacaacgaggcccttggaagacagcgacgacggggacttcgag
gacaagaggnntgactacatgtccgacggctccagcagctcccaggacgagatggagggc
aagcccaaagtgaccaagcaggaagagggcccaaagggtgtggacgagcagagcgagagc
agcgcagagagcgaggaggaaaagccacccgaggaggacaaggaggaggaggaggagagg
aaggccccaaccccccaggagaagaagcgcaggaaagacagcagtgacgagtcggacagc
tcagaggagagcgacattgacggcgaggcctcctcggctctcttcatggcgaaaaagaag
acaccccccaagagggagcggaagccatcgggaggcagctcgcgggggaacagccgcccc
ggcacacccagcacagagggcagcaacacctcgtccaccctgtgggcggccgccagtaag
ctggagcaaggcaagcggacgagcgacatgcccacagccaagcggctccggatggatgcc
gggccccagggcctgtccgggaagtccaccccccagccccagtctgggaagtcgacaccc
agcagcggcgacgtgcaggtgaccgaggacgccgtgcgccgctacctgacgcgcaaaccc
atgaccaccaaggacctgctgaagaaattccagaccaagaagacggggctgagcagcgag
cagacggtgaacgtgctggcccagatcctcaagcgtctcaaccccgagcgcaagatggtc
aacgacaagatgcacttctccctcaaggagtga
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