Loxodonta africana (African savanna elephant): 100665022
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Entry
100665022 CDS
T04351
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100665022 (COL22A1)
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Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
LpxI_N
Motif
Other DBs
NCBI-GeneID:
100665022
NCBI-ProteinID:
XP_003408353
LinkDB
All DBs
Position
Unknown
AA seq
1606 aa
AA seq
DB search
MGTLRRNSTAFLLWILLLWSAGSHGQAQRAGCKTVHYDLVFLLDTSSSVGKEDFEKVRQW
VANLVDTFEVGPDHTRVGVVRYSDRPSTAFELGRFGSREEVKAAARLLAYHGGHTNTGDA
LRYITSRSFSQQAGGRPGDRAFKQVAILLTDGRSQDLVLEAATAAHRAGIRVFAVGVGEA
LKEELEEMASEPKSAHVFHVSDFNAIDKIRGKLRRRLCENVLCPSVRVEGDRFKHTNGGT
KEITGFDLMDLFSVKEILGRRENGAHSSYVRMGSFPVVQRTEDVFPQGLPDEYAFVTTFR
FRKTSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYNAVGVMEDAVRVVFRGPWVSDIF
DRDWHKMALSIQGQNVTLYIDCALVQTLPIEARENIDIQGKTVIGKRLYDSVPIDFDLQR
IVIYCDSRHAELETCCDIPTGPCQVTVVTEPPPPPPPQRPPTSGSEQIGFLKTINCSCPA
GEKGEKGFDGPVGLPGTKGDVGVPGLVGAPGPKGEKGDSGRGPFVQGEKGEKGSPGPPGP
PGRDGSKGMRGEPGEPGEPGLPGEVGMRGPGGPPGLPGPPGHVGAPGLQGELGEKGARGE
KGERGLDGFPGKPGETGLQGRPGPPGVAGPQGEKGDVGPAGPPGIPGSVVQKEGLKGEQG
APGPRGHQGPPGPPGAPGLMGPQGKDGPPGLPGLRGKKGETGPPGTPGLLGPQGPPGPPG
VPGPPGPGGPPGLPGEIGFPGKPGHPGQVGPPGKDGLNGVRGLPGPKGELGERGEDGLPG
KPGLRGEVGEQGLAGRPGEKGEAGLPGAPGFPGMRGEKGDQGEKGELGLPGPKGSQGEKG
EAGPAGPPGLPGTTSLFTPPPRMLGEQGPKGEKGDAGVPGEPGPQGSPGELGPRGPPGPP
GTKGQEGAHGVPGAAGNPGAPGSIGPPGPSGPPGAVFSLKLRGAPLEDGERGEKGAAGEE
GTPGPAGLRGDPGAPGLPGPPGKGKDGDPGLRGPPGLPGPLGTKGDRGAPGIPGSPGNHG
DPGIGIAGSPGPAGPPGEKGPPGSRGLPGFPGPQGPAGRDGVPGNPGERGPPGKPGPSPL
LSPGDINLLVKDVCNDCPPGPPGLPGLPGFKGDKGLPGKPGREGTEGKKGDAGPRGLPGP
PGITGPQGTKGECGVDGEVGQKGDQGHPGVPGFMGPPGDPGPPGAGGITGAAGPPGIQGP
PGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPAGEPGKAGEPGLPGPEGARGLPGFKGH
AGDFGAPGPRGEPGAMGPPGREGSPGKDGDAGPTGPQGPQGLRGPPGKNGSPGSPGDPGP
PGDPGQKGSKGENASPGLPGFQGPRGPPGEPGEKGVPGKEGAAGKPGEPGSKGERGNPGT
KGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGPPGENGLAGPPGPPGQPGFPGLRGESPS
MDTLRRLIQEELGKQLETKLAYLLAQMFPVHTKASQGRPGPPGPPGKDGLPGQAGPMGEP
GQPGQGGLEGPSGPIGPKGERGAKGDPGVPGVGLRGEMGPPGIPGLPGEPGYAKDGLPGS
PGPQGETGPAGHPGPPGLPGPPGQCDPSQCAYFASLAARPGNVKGP
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccctccgaaggaactccacagccttcctgctctggatactgctgctgtggagt
gcaggcagccatgggcaggcacagagggcaggttgcaaaactgtgcactacgacctggtc
ttcctgctggacacctcctccagcgtgggcaaggaggactttgagaaggtgcgccagtgg
gtggccaacctggtggacacctttgaggtgggtcccgaccacacgcgcgtgggtgtcgtg
cgctacagcgaccggcccagcacggccttcgagctgggccgcttcggctcgcgggaggag
gtcaaggcggccgcgcggctgctggcctaccacgggggccacaccaacacgggcgacgcg
ctgcgctacatcaccagccgcagcttctcccagcaggctggcggccggcccggcgaccgc
gccttcaagcaggtggccatcctgctgaccgacggccgcagccaggacctggtgctggaa
gccgccaccgccgcgcaccgggcgggcatccgcgtcttcgcggtgggcgtgggcgaggcg
ctgaaggaggagctggaggagatggcctcggagcccaagtccgcccacgtcttccacgtg
tcggacttcaacgccatcgacaagatccgtggcaagctgaggcgccgcctgtgtgaaaac
gtgctctgtcccagcgtccgcgtagaaggagatcgctttaagcacaccaatgggggaacc
aaggaaatcacaggttttgacctgatggatttgttcagtgtgaaggaaatcttgggaagg
agagagaatggcgcccacagctcctatgtccggatgggatccttccccgtggtgcagagg
actgaggatgtgttcccacaaggcttgcctgacgagtacgcctttgtcacaactttccgg
ttccggaaaacatctcggaaagaagactggtatatctggcaggtcatcgaccagtatggc
attccccaggtctcgatccggctggacggggagaacaaggcggtggagtacaatgctgtg
ggcgtcatggaggacgctgtcagggtggtcttccgagggccctgggtcagtgacatcttt
gaccgtgactggcacaagatggccctcagcatccaaggccagaacgtgaccctctacatt
gactgtgcactggtgcagacgctgcccattgaggccagggagaacatcgacatccagggg
aagacagtgattggcaagcgcctctacgacagcgtgcccattgatttcgacttgcagcgc
attgtgatttactgcgactcgcggcacgcagagctggagacctgctgtgacatccccacc
ggtccgtgccaggtgaccgtcgtgacagagcctccacctccacccccaccccagcggcct
cccacctctggaagtgaacagattgggtttttgaagaccatcaactgctcctgcccagcc
ggagaaaagggtgaaaagggctttgatggcccagtgggacttcccggaacaaagggagac
gtgggggtccctgggctggttggagcacctggacccaagggagagaaaggcgactcgggc
agaggacctttcgtacaaggagaaaagggagaaaagggttccccgggcccgcctggcccc
cctgggagagatggcagcaaaggcatgaggggggagccgggagagccgggagagccgggg
ctgcctggcgaggtgggcatgcgggggcctggaggaccccctggacttcccggaccccct
ggacacgtgggagctcctggtctccaaggagaactaggtgaaaagggtgccagaggagaa
aagggggagcgaggcctggatggattccctgggaagccaggagagacaggactgcagggg
agacctgggcctcccggtgtggcagggccccaaggagagaagggtgacgtaggacctgct
ggcccccctggcataccaggctctgtggtgcagaaagagggcctgaagggtgagcaggga
gcaccaggtccacggggtcaccagggcccacctgggccaccaggagctccgggtctaatg
ggcccacaaggcaaggatggacctcctggtttgccaggtcttcgagggaagaaaggtgag
acgggccctcctggaactcctgggctgctggggccgcagggtcctccaggaccgcctggt
gtcccaggacccccagggcccggaggccccccgggcttacctggtgagatcggcttccca
ggaaaacctgggcatccagggcaagtggggccacctggaaaggatgggctgaacggagtg
cgaggcctgccaggacctaagggtgaactaggagaaagaggagaagatggtctacctgga
aaacctggcctccggggtgaagttggggaacagggcctggcaggccgacctggagagaag
ggagaggcaggtctcccaggtgctccaggattcccgggcatgaggggagagaaaggagac
cagggagaaaaaggtgaactgggacttccaggaccgaaaggtagccaaggtgaaaagggt
gaagctggcccagcaggtccccctggattacctggaactacatccctgttcacaccaccc
ccgagaatgctgggagagcaggggcccaaaggagagaagggcgatgcaggtgtgcctggg
gagccgggaccacagggcagtcctggagaactagggcctcgaggaccccctggaccaccg
ggcaccaaaggacaagaaggagcccacggggtgcctggagcagctggaaacccgggtgct
cctggatccataggtcccccaggtcccagtggccccccaggagccgtgttctccctgaaa
ctcaggggggcccccctggaagacggggagcgcggtgagaaaggagcagctggtgaagaa
ggaaccccagggccagctgggctcaggggtgatcctggggctcctgggctccccgggcca
ccgggaaaagggaaagatggagatccgggactccgtggaccacctggattacctggaccc
ctgggaacaaagggagaccgaggtgcacctgggatccctggctctcctggcaaccatggc
gatccgggcattggcattgctggctctcctggccctgctggaccgccaggagagaagggg
ccaccgggatctcgaggcttacctggattcccagggccccagggaccagccggccgggat
ggtgtaccaggaaacccaggagaaagagggcctcctggcaaaccaggtccctctccacta
ctgtctccaggggacataaacctcttggttaaggacgtgtgcaatgactgccctcctggt
cccccaggcctccctggtctaccaggttttaaaggggacaaaggactcccaggaaagcca
gggagagaaggcacagaagggaaaaagggggatgctgggcccagaggcctcccagggccc
ccaggcataactggaccacagggaactaaaggagagtgtggtgtagatggtgaagttggg
cagaaaggtgatcagggccatcctggagttccaggttttatggggcccccaggggaccct
ggaccaccgggagcaggtggaatcacgggagctgctgggccaccaggaatccaaggaccc
ccggggaaagaaggtcctcctggcccccagggcccatctggattgccaggaatcccagga
gaagaaggcaaagagggcagagatggaaaaccaggccccgctggagagccaggcaaagct
ggagagccgggtctgccaggaccggagggggctcgaggcctacctggcttcaagggacac
gctggtgattttggcgcacctggtccccggggagagcctggtgctatgggcccccctggc
cgggaagggtctccaggaaaagacggtgatgctggacccacagggccacagggtccccaa
ggactgaggggccctccgggtaagaatggatcacctggatctccaggagaccctggtcct
ccaggagacccaggccagaaaggaagcaaaggagaaaatgccagcccagggcttcccggc
ttccagggtccccgtgggcctccgggagaaccgggagagaaaggagttccaggcaaggag
ggtgctgctgggaagccgggagagccggggtccaaaggagaaaggggaaatcctggaacc
aaaggggacaaagggcctcctggcgggaagggccagcctggggaccctgggatccccgga
cacaaaggccacactggcctgatgggcccccaaggaccaccaggggagaatggactggcg
ggacccccagggcctccgggccagccaggattcccaggactgaggggggagtctccatcc
atggacaccctacgccggcttattcaagaagagctcgggaagcagctggaaaccaaactt
gcctacctcctggctcagatgttcccagtgcacacgaaggcatctcaaggcagacctggg
ccccccggacctcctggaaaagatgggctgccaggccaggcaggtcccatgggggagccg
ggccagccagggcaggggggtctggaaggaccctctggaccaatcggtcccaaaggtgag
cgaggagccaaaggtgacccaggtgtacctggagttggccttcgaggcgagatggggccc
cctggaatcccaggtctacctggggaacctggctatgctaaagatgggcttcctgggagc
cctggtcctcaaggggagacaggaccggctggacaccctggtcccccaggcctgcctggc
ccccctggccagtgtgacccctcccagtgtgcctactttgccagcctcgctgcccgccca
ggtaatgtgaaaggtccctag
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