Loxodonta africana (African savanna elephant): 100665064
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Entry
100665064 CDS
T04351
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100665064 (HELZ)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
100665064 (HELZ)
3'-5' decay
Other 3'-5' decay factors
100665064 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PAM2
zf_CCCH_4
PhoH
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_7
Bac_DnaA
AAA_16
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
100665064
NCBI-ProteinID:
XP_023412768
LinkDB
All DBs
Position
Unknown
AA seq
1923 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFAGPCPMEIERIKIESL
LLLGEGLVKGDGAFRAVLCCMQLKGKLQPVSSILAKSLTGESLNGMVTKDLTRLKTLLTE
TETATSNVLSGYHVEDLEEGSCNGWHFRPPPRGITSSEEYTLCKRFLEQGICRYGAQCTS
AHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLIEKWMNSLSPEKVLSECIEGVK
VEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLYDAHRPHFSIIAISAGDSTTQV
SQEVPENCQEWIGGKMTQNGLDHYVYKVGIAFNTEIFGTFRQTIVFDFGLEPVLMQRVMI
DAASTEDLEYLMHARQQLVTTAKRWDSSSKTIIDFEPNETTDLEKSLLIRYQIPLSADQL
FTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEVSKFNLKVQLQILASFMLTGVSGGAKY
AQNGQLFGRFKLTKTLSEDTLAGRLVMTKVNAVYLLPVPKEKLVQTQGTKEKVYEATIEE
KTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPLCEMHYALDRIKDNGVLFPDIT
MNPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQLPPVLIIGPYGTGKTFTLAQA
VKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPV
VHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAM
ECETIMPLALATASTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRI
LLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYN
NAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERV
LNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITR
AQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHGITFEQIKAQLEALELKKTYVL
NPLAPEFIPRALRLQHTGNTSKQQQSPPKAKVLHHTQNDHFQNDGIVQPNPSVLIGNPIR
AYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYGGNVVMSVPLPVPWTGYQGRF
AVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVSIGQPQNQHQEKDQHEQNRNG
KTDTNNPGPEINKIRTPEKKPTEPKQVDLESNPLNRSPESRPGGVYPSTKFHRKDNLNPR
HINLPLPAPHAQYAIPNRHFHSLPQLPRPPFPIPQQHSLLNQQQNNLPEQPNQMPPQPNQ
VVQQQSPLNQQTQQPPPQLSPAYQAGPNNAFFNNAVSHRPQSPPVEAVIPEQQPPPMLQE
AHSPLRTVAQPSPILPSHLNNFIEENSSGLPIAEALDRMHGSVALETLRQQQARLQQWNE
HNAYLSQGSIPYPHHHHPHLQHLPQPPIGLHPPPVRADWKLTNSAEDEAETTYSRFQDLI
RELSNRDQSETRELAEMPPPQSRLLQYRQVQTRSPPAVPSPPSNSDHSSHFCNFNDNSRD
VEVASNAAAFPQRLPPQMFNSPFSLPSEHIAPPPLKYLAPDGAWTFANLQQNHLMGPGFP
YGLPPLAHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQ
RRISSSSVQPCSEEVSSPQDSLAQCKELQDHNHQSSFNFSSPESWVNTTSSAPYQNIPCN
GPSRTAQPRELIAPPKTVKPPEDQLKSENLELSSSFNYNVLQHLGQFPPLMPNKQIAESA
NSSSQQSSVGSKPAMSYASALRAPPKPRPPPEQTKKSSDPLSLFQELSLGSASGSNGFYS
YFK
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagccgagaagtcatgtgaacaagcgtgtgaatcacttaaaaggcag
gactatgagatggccctcaagcactgcacagaggccctcctttctctaggccagtactcc
atggcagacttcgcaggaccgtgtccaatggagatagaacgcatcaaaatagagagcctt
ctgttgttgggagaaggattggtgaagggagacggtgcgtttcgggcagtgctttgctgc
atgcagctgaaaggaaagctccagcctgtgtccagcattcttgccaagtcactgacagga
gagtccctgaatgggatggtaacaaaagatttaacaagactaaaaacacttctcacagaa
acagagacagcaacgagtaacgtcctctctggatatcacgtggaagacttagaagaggga
tcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaatat
actttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcccagtgtacttca
gcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggttgataaaa
ttgaaacaacaaaatgagaataaacagctctcaggcagttacatggaaaccttgatagaa
aagtggatgaattcattatctccagagaaagtgctcagtgagtgtatagaaggagtaaag
gtagaacataatccggatctgtcggtcactgtcaacaccaaaaagtcgcatcagacgtgg
acctttgctctcacttgtaagcctgcaagaatgctgtatcgtgtagcgttgctttatgat
gctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccaggta
tcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatgacccaaaatgga
ttagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaactttt
cgccaaaccatagttttcgactttggattagaaccagtactcatgcaaagagtaatgatt
gatgcagcttctacagaagatcttgaatacctgatgcatgcaagacaacagctagtaacc
acagctaagcgttgggattcttcttctaagactattatagattttgagcctaatgaaact
actgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccagcta
tttacccagtctgttttagacaaatcattgaccaagagcaactatcagtcacggttgcat
gaccttctttatattgaggagatagcccagtataaagaagtcagcaagttcaaccttaaa
gtgcaattgcagattctagcaagcttcatgctcactggagtttctggaggtgcaaagtat
gctcaaaatggacaactttttggccgctttaagcttactaaaacactttctgaagatact
ttggctggacgactggtgatgaccaaagtcaatgctgtttatttattaccagtccctaaa
gagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaagaa
aaaacaaaagaatatatatttttaaggctatccagggaatgctgtgaagaacttaatctc
cgacctgattgtgacacacaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattatgcactagacaggatcaaggacaatggggttttgtttccagacatcact
atgaatcccactataccttggagtcccaacagacagtgggatgagcagttggatcctcga
ctaaatgcaaaacaaaaagaggctgttctggctattacaactccactttctatacagctg
ccacctgttcttatcatcggaccctatgggacaggcaaaacgttcactctagctcaggct
gtgaagcacatactccagcaacaggagactagcaggattctcatttgcacccattctaat
agtgctgctgacctctacataaaggattatttacatccatatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttcagaaatcgctgggtgaagactgtccacccagtt
gtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaggaa
gatattcttaaacatcgagtggttgttgttacgttgaatacttcccagtacctctgtcag
ttggaccttgaacctgggttttttacacacattctgttagatgaagctgcacaggccatg
gagtgtgaaaccattatgcccctagcattagcaactgcgagcactcggatcgtcctggct
ggagaccacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaacctt
cacgtctcattacttgatcgactttatgagcactaccctgctgagtttccctgtaggatc
ctcctgtgtgagaactaccgctcccatgaagctatcatcaattacacttctgagcttttt
tatgaaggcaaactgatggccagtggaaagcagccagcacacaaagatttctacccacta
actttcttcacagcgcgaggagaagatgtgcaagaaaaaaatagcacagctttttataat
aatgcagaggtatttgaagtggtggaacgtgtagaagagttgagaaggaagtggccagta
gcgtgggggaagttagatgatggcagtattggcgtggtgactccgtatgccgatcaagtg
tttaggatacgtgctgaacttcgaaaaaagagattgtctgatgttaacgtggaaagggtg
ctcaacgttcaaggaaagcaattcagagttctgtttcttagcaccgtgcgtacaaggcat
acttgtaaacacaaacagacaccaattaaaaagaaagagcaactgctggaagattccacg
gaggatttagactatggttttttatctaactacaagcttctcaacactgccatcaccaga
gcacagtccctggttgctgtagtgggtgatcccattgctttgtgctctattggaagatgc
aggaaattttgggagcggtttattgccctgtgtcatgaaaataatagccttcatggaatc
acttttgaacagattaaggctcagttagaggctttagaactaaagaagacgtatgtgttg
aatccactggcacctgaatttattccccgtgctctaagattgcagcatacaggaaatacc
agcaaacaacagcagtcgccacccaaggcgaaagtccttcatcatacccagaatgatcat
tttcagaatgatggaattgttcagcccaatccttctgtacttattggcaatcctattaga
gcatatactcctccaccccctcttggacctcacccaaatttgggaaaatctccaagcccc
gttcaaagaatagaccctcacactgggacaagtattctttatgtacctgctgtctatgga
gggaacgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtaggttt
gcagttgatcctcgaatcattacacaccaggcagcgatggcctataatatgaacctatta
cagacacatggacgagggtctcctataccttatggccttggacatcacccacctgtcagc
atagggcagccacaaaatcagcatcaggagaaggatcaacatgagcaaaatcggaatggt
aaaactgacacaaataatcctggacctgaaattaataagattcgaacaccagagaaaaag
cctacagaaccaaaacaggttgatttggaatcaaatccacttaacagaagtcctgaatca
cgtcctggcggtgtttatcccagtaccaaatttcatcgcaaagataatctcaaccccaga
catataaatcttcctcttcctgctccccacgcacagtatgcaatccctaatcgccatttt
cattcccttccccagctaccaagaccgccatttccaattccgcagcagcacagtttgtta
aatcagcagcagaataatttgcctgagcagcccaatcaaatgccaccccaaccaaatcag
gtagtccagcagcagagtccattgaatcagcagactcagcagccacctcctcaactctct
cctgcataccaggcaggacccaacaatgctttttttaataatgcagtttctcatcgacca
cagtctcctcctgtggaggctgtgattcctgaacagcagcccccacccatgctgcaagaa
gcccacagtcctctgagaaccgttgcacagcccagccccatccttccttcacatctgaat
aatttcattgaagagaactcctcaggattgccaatagcggaggcgttagatcgtatgcat
gggagtgtagctctggaaacattaaggcagcagcaagcgaggttacagcagtggaacgag
cataatgcttatctcagtcaaggcagtattccatacccacaccatcaccatcctcacctc
caacatctccctcagccgcccattggattacatccgccgccagtgagagccgactggaag
ctcaccaacagtgccgaagatgaagcagaaacaacgtactcaaggtttcaagacttaatc
agagaactgtctaatcgtgatcaaagtgaaacacgagaactagctgaaatgccaccacct
cagtcaagacttttgcaatatagacaagttcagactaggagccctccagcagtcccatct
cccccgtccaattcagaccacagtagccacttttgtaactttaatgacaacagcagagat
gttgaagtagccagcaacgcagcagcgtttccgcagcgcctaccgccccagatgttcaac
tcgcctttctctttgccatcggaacacattgcgcctccccccttgaagtatctggcgcct
gatggagcatggacttttgctaacttacaacagaatcatctaatggggccgggctttccc
tatggcctacctccattggctcacaggccaccacagaacccttttgtgcaaatacagaat
catcaacatgctattggtcaagagccatttcacccattatcatctcgaacagtatcttct
tcttcgctccctagcttagaagagtatgaacccagaggacctggtcggcccttgtaccaa
agaaggatctcatccagctcagtgcagccttgttctgaagaagtaagctctcctcaagat
agtcttgctcagtgtaaagagcttcaggaccataatcaccaatcttctttcaacttttca
tccccggagtcctgggtaaacaccacctcatctgccccctaccagaacattccgtgcaat
ggacccagcaggacagcccagcccagagagttgatagctcctcccaagactgtcaaaccc
cctgaagatcaactgaagtcggaaaacctggagttgtccagttccttcaactacaacgtg
ctgcagcatcttggccagttcccacccctcatgcccaacaagcagattgcggagtcagcc
aacagcagtagccagcagagctctgtggggagcaagcctgccatgtcctatgccagtgct
ctgcgcgcccctcccaagcccagacccccacctgagcagactaagaagagtagcgaccct
ctgtctctgttccaggaacttagcctggggagcgcctcgggcagcaatggcttttactcg
tattttaaataa
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integrated database retrieval system
