Loxodonta africana (African savanna elephant): 100665514
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Entry
100665514 CDS
T04351
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin isoform X4
KO
K06548
sialoadhesin
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100665514 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lav04090
]
100665514 (SIGLEC1)
04091 Lectins [BR:
lav04091
]
100665514 (SIGLEC1)
CD molecules [BR:
lav04090
]
Proteins
100665514 (SIGLEC1)
Lectins [BR:
lav04091
]
I-type lectins (Siglecs)
100665514 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
C2-set_2
Izumo-Ig
C1-set
Ig_CD22
Ig_C17orf99
SMCHD1_S5
Motif
Other DBs
NCBI-GeneID:
100665514
NCBI-ProteinID:
XP_003411487
LinkDB
All DBs
Position
Unknown
AA seq
1705 aa
AA seq
DB search
MGFLHQLLLLASLIPPGQASWGVSSPQDVQGLKGSCLLIPCIFNFPAEVAVPKGITAIWY
FDSNSGGERKVVSHSENPTLVEARFRGRALLAGSPEHKVCNLLLKDLQPEDSGSYKFRFE
ISEGNKWLDVQGTTVTVTEEPRTPAIASPAELREGMEVDFNCSTPYACLQEPVSLEWQGQ
DPAHSVTSTLQRLEPTGIRHLETLHMTLSWQDHGRTLGCQLSVAGRKALGEIHLQVQYAP
RGVEVLLSSLGQNILPGDLVTLTCQVNSSYPEIRSVQWVKDGVPLEAKGRVLRLPQATWT
DSGVYTCQAENAVGSAISTPVSLYVFAAEVQVNPEGPFLENQTVTLTCHMPSGTPSEIRY
SWYKNQFLLEDAHARTLQLNRVTRADAGFYFCEVRNAQGSERSGPVSVVVNHPPLTPDLT
AFLETQGGLMGIIHCSVVSEPPAILVLSHGSLILASTPQEGNRGPRFSVFSAPNSLRLEI
QHLEPADSGEYKCLATNSLGNASSTLDFHSNAARLLISPAAEVAEGQAVTLTCRSGLSPT
PETRYFWYRNGVLLLEGPSSSLVLPMASSTDAGSYHCRAQDSHSASGPSSLAILTVLYAP
RQPRLIARLDPDATGVGTGRRGLLLCRVDSDPPALLRLLHGDHIVASSLPPAGGYSQHIQ
VTRAPNLLRVEIPDPVLEDEGTYLCEASNAMGNTSASATFNARATVLVIEPSDTLREGVA
ANLTCNVSRKAAGSPANFSWFRDGALWTQGPLETVTLLPVARTDAALYACHILARAGTQP
SAPVALNVLYPPDPPKLSALLDVGQGHVAVFVCTVDSRPPAQLALFHGENLLATSPGPQL
PSRGRLQAKATANSLQLEVRELSLGDSGSYRCEATNVFGSANTSLFFQVRGAWVQVSPSP
EVQEGQEVVLSCQVPTGVPDGTSYRWYRNSQLLQEQTLATLHFAAISSSQAGAYHCQAQA
PGLATTSLATPVSLHVSYAPHQAKLTILMDTGPGRLGLFLCRVDSDPPAQLRLLHGDRLL
ASTLQGLGASAGSSPHLQVVVASNALRLEIHGAVLEDEGVYTCKANNTLGQASASATFDA
QAVSVQVWPEATVHEGQLVNLTCLVWTHLAHLTYTWYQDGKQRPGARSILLPNVTVTDAA
SYRCGVGIPGQAPRLSKPVSLDVLYAPRGLRLTYLLESHGEQLVLLLCTVDSRPPAQLAL
SHAGRLLASSTTDSISNTLRLELWDPRPSNEGLYSCSAHSPLGQANMSLELRLEGVRVTL
APSAAVPEGDPVTVTCEDPTAHPPTLYAWYHNGRWLQEGPLASLSFLVATRAHAGAYSCQ
AQDAQGTRSSRPAALQVLYAPRDAVLSFFRDSRASPATVVQCTVDSEPPAELTLSCDGQV
LATSQGARGSALGTGPIQVARNALRLQVQEVPAGNEDTYVCMAHNSLGSVSTTGQLQAEG
VRVVAEPGLDLPEGAALNLSCCLPDGHGALGNTTFAWFWNGRQLPAEPVPTLPFTSVTRA
QAGVYHCRVKLLSGAVISAPVMLRVLYPPETPTMTVFVEPESGLQGILDCRVDSEPRASL
TLHLGGRLVASSQARGPPAEPHIHVLASPNALRVDMEELRPSDQGEYVCSASNALGSASA
STYFGTRALHRLHLFQQLLWVLGWLAGVLFLLLSLGACYAWRRRPLHKQRSCQNLVEMAF
QKETTQLIDPDAATFETSYCAPTLS
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcctgcaccagctcctcctcctggcctcactcatcccaccaggccaggcctcg
tggggtgtttccagtccccaggatgtgcagggcttgaaggggtcctgcttactcatcccc
tgcatcttcaacttccctgccgaagtagcagtgcccaagggcatcacagccatttggtat
tttgactccaattctgggggagagcggaaggtggtgagccattcagagaaccccacgctg
gtggaggcgcgcttccgaggccgtgccctgctggcggggagccccgagcacaaagtgtgc
aacctgctgctgaaggacctgcagcctgaggactcgggctcctacaagttccgctttgaa
atcagcgagggcaacaaatggttagatgtccaaggcaccacggtcaccgtgacagaggag
ccccgcacacctgccatcgcctcgcccgccgagctgcgtgagggcatggaggtggacttc
aactgctccaccccctacgcctgcctgcaggagccggtcagcctggaatggcaaggccag
gacccggctcactctgtcacctccaccctccagaggctggagcccaccggcatcagacac
ctggagaccctccatatgaccctgtcctggcaggaccatggccggaccctgggctgccag
ctctcggtggccggtcgcaaggcactgggcgagattcacctccaagtccagtatgcccca
cggggcgtggaggtcctgcttagctccttggggcagaacatcctcccaggtgacctggtc
acactcacctgccaggtgaatagcagctacccagagatcaggtcggtgcagtgggtcaag
gacggggtgcccctcgaagccaagggccgggtgctgcggttgccccaggcaacctggacc
gattccggcgtctacacctgccaagctgaaaatgctgtgggttctgccatctcgacccct
gtcagcctctatgtcttcgccgctgaggtccaggtgaacccagaaggccccttcctggag
aaccagacagtgacactgacctgccacatgcccagtgggacgcccagtgagatccgctac
agctggtacaagaaccagttcctgttggaggacgcccatgcccgcaccctgcagctgaac
cgggtcaccagggccgacgctggcttctacttctgcgaggtgcggaacgcccagggcagt
gagcgctcgggccccgtcagcgtggtggtcaaccacccacccctcactccagacctgact
gctttcctggaaacgcagggggggctcatgggtatcatccactgctctgtggtcagtgag
cccccagccatcctggtactgtcacatgggagcctcatcctggcctccaccccccaggag
ggtaaccgcggcccacgcttcagtgtcttctctgctcccaactccctgcgcctggagatt
caacacctggagccagctgacagcggggagtacaagtgcttggcaaccaactcccttgga
aatgcgtcatccaccctggactttcactccaatgctgctcgtctccttatcagcccagca
gcggaggtggcagaagggcaggcggtgacgctgacctgcaggagtggcctgagccccacg
cctgaaacccgctacttctggtaccggaatggagtcctgcttctcgaggggcccagcagc
agccttgtgctccccatggcctccagcaccgacgccggctcataccactgccgggcccag
gacagccacagcgccagtggtccttcctcgcttgccatccttactgtgctctatgcccca
cgccagcccaggctcattgcccgcctggaccctgatgccactggagttgggactggacgg
cgaggcctcctcttgtgccgtgtggacagcgaccctccggccctgcttcggctgctccac
ggagaccacattgtggcctcttccctgccaccggctgggggctattcccagcacattcag
gtcactagagcccccaacttgctgcgcgtggagattcctgaccctgtgctggaggatgag
ggcacatacctatgtgaggccagcaatgccatgggcaacacctcggcctccgccaccttc
aacgcccgggccaccgtcctggtcatcgagccatcagacacactgcgggaaggtgtggca
gccaacctgacttgcaacgtgagccgcaaagccgccggcagccctgccaacttctcctgg
ttccgggatggggcactgtggacccagggtcccctggagaccgtgaccctgttgcctgtg
gcccggaccgatgctgccctctatgcctgccacatcctcgccagagctgggacccagccc
tctgccccagtggccttgaatgtgctctacccaccagaccctccaaagctgtcggccctc
ctggacgtgggccagggccatgtggctgtgtttgtctgcaccgtggacagccgccctcca
gcccagctggccctgttccatggggagaacctcctggccactagcccggggccccagctt
ccatcccgtggccggctccaggccaaggccacggccaactccctgcagctggaggtccga
gaactgagtcttggagactctggcagctaccgctgcgaggccacaaatgtttttggatca
gccaacacctccctcttcttccaggtccgaggagcctgggttcaggtgtcaccgtcacct
gaggtccaagagggccaggaggtggttctgagctgccaggtacccacaggggtcccggac
gggacctcataccgctggtaccggaacagccagctcctccaggagcagaccttggccacg
ctccacttcgcagccatttcttcaagccaagctggagcctaccactgtcaagcccaagcc
ccgggcttggccaccacaagcctggctacccccgtcagcctccatgtgtcctacgcaccc
caccaggccaagctcactatcctgatggacactggccctgggcgactgggcctcttcctg
tgccgtgtggacagtgaccctccagcccagctgcgcctgctccacggggaccgccttctg
gcctccaccctgcagggtttgggggcctctgcaggcagctctccccacctgcaggtggtc
gtggcctccaatgccttgcgcctggagattcacggtgcggtgttggaggatgagggtgtc
tacacctgtaaggccaacaacaccctgggccaagcttcggcctcagccacctttgatgcc
caggctgtgagtgtgcaggtgtggcctgaggccacagtacacgaggggcagctggtgaac
ctgacctgcctggtatggacccacctggcccacctcacctacacgtggtaccaggatggg
aagcaacgcccaggtgcccgctctatcctcctgcccaacgtcacggtcacagatgctgcc
tcgtaccgctgtggtgtggggatccctggccaggcaccccgcctctctaaacctgtctcc
ctggatgtcctctacgcgccccgtggcctgcgcctgacctacctcctggagagccatggt
gagcagctggtcctgctattgtgcactgtggatagtcgtccacctgcccagctggccctc
agccacgctggccgtctcctggcctcctcgaccacagattccatctccaacaccctgcgc
ctggagctgtgggacccccggcccagcaacgagggtctctacagctgctctgcccacagc
cccctgggccaggccaacatgtccctggagctgcggctggagggagtgcgggtgaccctg
gctccatcagctgctgtgcctgagggggaccctgtgacagtgacctgtgaagaccccact
gcgcacccacccactctttatgcctggtaccacaatggccgctggctgcaagaggggcca
ctcgcctccctctcgttcctggtggccacgcgggctcacgcgggtgcctactcctgccag
gcccaggatgcccagggcacacgcagctcccggcctgctgccctgcaagtcctctatgcc
ccccgtgacgccgtcctgtccttcttccgggactctcgggccagtcctgcaaccgtagtg
cagtgtactgtggacagcgagccgcctgccgagctgaccctgtcctgtgatggccaggtg
ctggccaccagccagggggcccgtggctcggcattggggacaggtcccatccaggtggcc
cgcaatgccctgaggctgcaggtgcaagaggtgccagcaggaaatgaggacacctatgtc
tgcatggcccataattcgctgggctcagtcagcaccactgggcagctgcaggctgaaggt
gtgcgtgtggtggcggaaccaggcctggacttgcctgagggcgctgcactgaacctgagc
tgctgcctcccagatggccatggggccctgggcaacactaccttcgcttggttctggaat
ggccggcaactccctgcagagcctgtgcccactctccccttcacctctgtgacccgtgcc
caggctggggtgtaccactgccgggtcaagctcctttctggggccgtcatctctgctcca
gttatgctccgcgtgctctaccctcctgagacacccaccatgacagtttttgtagagcct
gagagtggactccagggcatcctggactgccgagtggacagtgagccacgtgccagcctg
accctccacctcggcggtcgattggtggcatccagccaggcccggggccctcctgctgag
ccacacatccatgtcttggcttctcctaatgccctgcgggtggacatggaggagctgagg
cccagcgaccagggggaatacgtgtgctctgcctccaatgccctgggttctgcctcagcc
tccacctattttgggactagagccctgcaccgcctccatctgttccagcagctcctctgg
gtcctggggtggctggcaggtgttctgttcctgctattgagcctgggggcctgttatgcc
tggagaaggaggcccttacataagcagagatcctgccagaatttggtggagatggctttt
cagaaggagaccacgcagctcattgatcctgatgcagccacatttgagacctcgtactgt
gctccaaccctgagctga
DBGET
integrated database retrieval system
