Loxodonta africana (African savanna elephant): 100665641
Help
Entry
100665641 CDS
T04351
Symbol
IGHMBP2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lav03009
]
100665641 (IGHMBP2)
03012 Translation factors [BR:
lav03012
]
100665641 (IGHMBP2)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100665641 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
100665641 (IGHMBP2)
Ribosome biogenesis [BR:
lav03009
]
Eukaryotic type
Other ribosome biogenesis factors
100665641 (IGHMBP2)
Translation factors [BR:
lav03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100665641 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
SMUBP-2_HCS1_1B
R3H
zf-AN1
Ada3
UvrD_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
100665641
NCBI-ProteinID:
XP_010597446
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MASAAVESFVTKQLELLALERDAEVEERRSWQESVSLKELQSRGVCLLKLQVSNQRTGLY
GKLLATFEPRRCGSAAVLPSNSFTSGDIVGLYDGANEGSPLATGILTRVTQTSATVAFDE
SQHFQLSLERENSYRLLKLANDVTYQRLKNCRLLPEWSCSFWSKVLCCAPSNIAVDNLVE
RLAHCEQRVLRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKEIDQVFVKNKKTQDK
REKGNFRNELKQLRKELKEREEAAMLQSLTSAHVVLATNTGASSDGPLKLLPESYFDVVV
IDECAQALEASCWIPLLKARKCILAGDHKQLPPTVISHKAGLAGLSLSLMERLAEQHGER
AVRLLTVQYRMHDAISQWASEALYGGQLTAHPSVAQHLLRDLPGVAPTEETAVPLLLIDT
AGCGLFELDEEEEQSRGNPGEVRLVSLHVQALVDAGVPARDIAVITPYNLQVDLLRQSLA
HRYPELEMKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAIVCD
SRTVTNHAFLKTLVGYFTEHGEVRTAFEYLDDIVPENYSHESAQGPAGVKAQGSAPEMKR
PPCSGQQTGGQAARAARLDQKKLDAKPSGSEAPSQPSLNGGGLEPVEGRDNEDHFRAMIT
AFVASEETRLEFPASLNAHDRMRVHQIAEEMGLRHSSSGEGRGRRVTVSKSXRPRLAALQ
PPAAKRSPSPLQAEPPPTPTQAERPSSPLPAEHPPLPVRAKHPPSPTQAEHPRSELSSSG
GRGGDPLDLKALHLERXQREAGRWEQLATKGQAGAGTRRLSEKKKRKEGKGHTARALPVE
EDFDALVSAAIRADNTCGFAKCSASVVTLGQLCPHCSRRYCLSHHLPEVHGCGERARAHA
RQRISREGVLYAGSGTKDRTLDPARRAQLQRRLDTKLDALTSQRKSKRKDKEK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggctgtggagagcttcgtgaccaagcagttggaactgctggcgctcgag
agagacgcggaggtcgaggagcgcaggtcctggcaggaaagcgtctccctgaaggagctc
cagagccgaggtgtttgtctgctgaagctccaggtatccaaccagcggactgggctgtac
gggaagctgctggccaccttcgagcccaggaggtgcgggtctgctgcagtgctgcccagc
aacagcttcacttccggcgatatcgtggggctgtatgacggcgctaacgaaggcagtccg
ctggccacggggatcctgacgcgggtcacccagacatcggccacggtggcctttgacgag
tcgcagcatttccagttgagcttggagcgagagaattcctacagactactcaaacttgcc
aacgacgtcacctaccagcgactgaaaaactgccgcctgctcccagagtggagctgcagt
ttctggagcaaggtcttgtgctgtgctccctcgaacatcgcagtggacaacctggtggag
cgcctggcccactgtgagcagagggttctgcgcctgggacacccagcccgcctgctggag
tccattcagcagcactccctggacgcggtcttggcgcggagtgacagcgcccagatcgtc
gcagacatcaggaaggaaatcgaccaggtctttgtgaaaaacaaaaagacccaggataag
agagagaagggtaattttcgaaatgagctgaagcagttaaggaaagaactgaaggagagg
gaagaagcagccatgctccaaagcctcacctcggcccacgtggtcctcgcaaccaacacc
ggtgcttcttctgatggccctttaaaattgctgcccgagagctactttgacgtggtcgtc
atcgatgagtgtgcccaggccctggaagcaagctgctggattcctttgctgaaggccagg
aagtgcatcctggctggggatcacaaacagctgcctcccaccgtcatctcgcacaaggcc
gggctggcggggctgtcgctcagcctgatggagcgcctggcggagcagcacggtgagcgc
gcagtgcgcctgctgacggtgcagtaccgcatgcatgacgccatctcgcagtgggcctcc
gaggccctgtacggcgggcagctcaccgcacacccctctgtggcccagcacctcctgagg
gacctcccaggagtggcccccacggaggagacggccgtgcccctgctgctcatcgacact
gccggctgcgggctctttgaactggacgaggaggaggagcagtcgagagggaacccaggt
gaggtccgccttgtcagcctgcacgtccaagctctggtggatgccggcgtcccggcccgt
gacatcgctgtcatcacgccgtacaacctccaggtggacctgctccggcagagccttgcc
cacaggtaccccgagctggaaatgaagtcggtcgacggcttccaggggcgagagaaggag
gctgtgatactgtccttcgtcaggtccaacaggaaaggtgaagttggctttcttgctgag
gaccggcgcatcaacgtggctgtcacccgcgcgcgccgccacgtggcaattgtctgtgac
tcgcgcaccgtcaccaaccacgcgtttctgaagaccttggtgggctacttcacggagcac
ggggaagtgcgcacggcttttgagtacctcgatgacatcgtgcccgagaactactcccat
gagagcgcccagggcccggcaggcgtgaaggcccagggctcggccccggagatgaagagg
cctccgtgcagtgggcagcagacgggaggccaggccgccagagctgccagactggaccag
aagaagctggatgctaagccttcgggctctgaagccccttctcagcccagcctaaatggg
ggtggtctggagccagtggagggaagagacaacgaggaccacttcagggctatgatcacg
gcgtttgtggcgagcgaggagacaaggctggagtttcctgcttccttgaatgcccatgac
aggatgcgggtccatcagatcgctgaggagatggggctgaggcacagcagctctggggag
ggcagggggcggcgtgtgactgtgagcaagagtnaccggccccgccttgctgccctccag
ccccccgcagccaagcgctcccctagccctctgcaggctgagcctccccccacccccact
caggctgagcgtccctctagccccctgccggctgagcatcccccccttcctgtacgtgcc
aagcatccccccagccccacacaggccgagcacccccgcagtgagctgagcagtagcggc
ggccgcggcggggatccgctggacctgaaggcactgcacctggaacgcntgcagagggag
gcgggccggtgggagcagctggccacgaaggggcaggcgggcgcggggacgcggaggctg
tcagagaagaaaaagaggaaagaaggaaaagggcacaccgccagagccttacccgtggag
gaggacttcgacgccctggtttctgctgccattagggctgacaacacctgtggctttgcc
aagtgctcggccagtgtcgtgaccctgggccagctctgtccgcactgcagccgccggtac
tgcctcagccaccacctgcccgaggtccatggctgtggagagcgggcacgtgcccatgcc
cggcagaggatcagccgagagggtgtgctctacgcaggcagcgggaccaaggacaggacc
ctggaccccgccaggagggcacagctgcagaggcggctggacaccaagctggatgccctg
actagccagaggaagagcaaaaggaaagacaaggagaagtga
DBGET
integrated database retrieval system
