Loxodonta africana (African savanna elephant): 100666033
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Entry
100666033 CDS
T04351
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X2
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100666033 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lav03041
]
100666033 (DDX46)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100666033 (DDX46)
Spliceosome [BR:
lav03041
]
Complex A
U2 snRNP components
U2 related factors
100666033 (DDX46)
Complex B
100666033 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
100666033
NCBI-ProteinID:
XP_003404549
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL
AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE
YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY
QPTNKGRYKVL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccactatcggaagcgatcagcatcacgtggacgctctggaagt
cgatctagaagtcgttctccctctgacaaaagaagtaaacgtggagatgacagacggtct
agaagtagagatagagatagaaggagagagagatctcgtagcagggataaaagaagatct
cggtcaagagacaggaagcgtctgaggcgttccagaagtagagagagagacagaagccga
gagcgacgaagatctcgcagtcgagacaggagacgctcgagaagcagaagccggggccgg
cgatccagatcctccagtcctggcaataaaagcaagaaagccgagaatagatctaggtcc
aaagaaaaaacagatggtggagaaagttctaaagagaagaaaaaagacaaagatgacaag
gaggatgaaaaagaaaaagatgctggtaattttgaccagaataagctggaagaagaaatg
agaaagcgaaaagaaagagtagaaaaatggcgagaagagcagcgtaaaaaggctatggaa
aatataggggaactaaaaaaggaaattgaagagatgaagcaggggaaaaaatggagttta
gaagatgatgatgacgatgaagatgaccctgctgaagctgaaaaggaaggaaatgaaatg
gagggtgaggagttagatcccttagatgcttacatggaagaagtgaaagaggaagtaaaa
aagtttaacatgagaagtgtaaaaggtggtggtggtaatgaaaagaagtccggaccaact
gtcacaaaagttgtcactgttgtaactaccaaaaaagcagttgtagattctgataagaag
aaaggtgagctcatggagaatgaccaggatgcgatggagtattcttcagaggaagaagaa
gttgatcttcagacggctcttacaggctatcagacaaaacagagaaagcttctagaacca
gttgatcatggaaaaattgaatatgaaccatttaggaaaaacttctatgttgaagttcca
gaactagcaaaaatgtctcaggaggaggtgaatgtgtttcgattggaaatggagggcatt
acagtcaagggaaaaggttgccccaaaccgattaaatcttgggtccagtgtggaatttcc
atgaagatcttaaattccctcaaaaaacatggctatgaaaagcccacaccaatccagacc
caagcgattcctgccataatgtctggacgagacttgattggcattgccaagacaggaagt
ggaaagaccattgcgtttctgttgcccatgtttagacacatcatggatcagaggtcatta
gaagaaggagagggaccaatagctgtcatcatgactccaactcgagaactggctttacag
attactaaagaatgtaagaagttttcgaagaccttgggacttagagtggtctgtgtttat
ggaggaacaggaatcagtgagcagattgctgaactgaaaagaggtgcggaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagcaaacagtggtcgggtcacgaatctt
cgaagggtgacatatgttgttttagatgaagcagatagaatgtttgacatgggttttgaa
ccacaggttatgcgcattgtggataatgtccggcctgatcgacagacagttatgttttca
gctacttttcccagagctatggaggctttggctcgtagaatcctgagtaaacccattgaa
gtgcaggttggaggcaggagtgtggtttgctcagatgtggagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagttacttgagcttctaggccattatcaagaatcagga
tctgttattatatttgtggacaagcaagaacatgccgatggtcttctaaaggatttaatg
agagcatcttatccttgcatgtctcttcacggaggtattgatcaatatgacagagacagc
atcataaatgactttaaaaatgggacctgcaaacttcttgtggccacctccgttgctgcc
cgagggctagatgtgaaacatctgattctggtagtaaattacagctgccccaaccattat
gaagattatgtgcacagagcaggacgaactggaagagcaggcaacaaaggttacgcctat
acttttatcacagaagatcaggcccgctatgctggtgacataataaaagcccttgaattg
tcaggcactgcagtacctcctgacctggagaaactttggagtgatttcaaagaccaacag
aaagctgaggggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttc
gatgaaacagaacaagctttggctaatgagaggaagaagttacagaaagcagctcttggt
ctacaggactcagatgatgaggatgctgctgttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtgaaggatatggctgctcctggaacgtcaagtgttcctgcg
cccaccgcaggaaacgctgagaaattagaaattgctaagagattggctctgagaatcaat
gcgcagaaaaatttgggcatcgagtctcaggatgtgatgcaacaggccaccaatgccatt
ctcagaggtggcaccattctggctcccactgtgtctgcaaaaaccattgcagagcagctc
gctgaaaagatcaatgccaagctcaattatgtgcctttagagaaacaagaagaggagaga
caggatggtggacagaatgaatcttttaagagatatgaggaagaattagagatcaatgac
ttcccacagactgctaggtggaaagttacttctaaggaagctcttcagagaatcagtgaa
tattctgaagctgcaattacaatcagaggaacatacttccctcctggcaaagaacccaag
gaaggagagcggaaaatttacttggcaattgaaagcgccaatgaactggctgtgcagaaa
gcaaaggcagaaatcaccagactcataaaagaagaactgatccggctgcaaaattcatac
caaccaacaaataaaggaagatacaaagtcttataa
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