Loxodonta africana (African savanna elephant): 100666411
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Entry
100666411 CDS
T04351
Symbol
COL21A1
Name
(RefSeq) collagen alpha-1(XXI) chain
KO
K16629
collagen type XXI alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100666411 (COL21A1)
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Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100666411
NCBI-ProteinID:
XP_003404465
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All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MTRYITFLRMVLVLLLQNSVLTEDGEIRSSCRTAPTDLVFILDGSYSVGPENFEIVKKWL
VNITKSFDIGPKFIQVGVVQYSDYPVLEIPLGSHDSGENLIAAVESIHYLGGNTRTGKAI
QFALDYVFAKSSRFLTKIAVVLTDGKSQDEVKDAAEAARDSQITLFAIGVGLEMEDAELR
AIANKPSSTYVFYVEDYFAISKIREVMKQKLCEESVCPTRIPVAARDEKGFDILLGLGVK
KKVKKRIQLSPTKIKGYEVTSKVDLSELTSNVFPEGLPPSYVFVSTQRFKVKKIWDLWRI
LTIDGRPQIAVTLNGVDKTLLFTTTSIINGSQVVTFDDPRVKTLFDEGWHQIRLLVTEQD
VTLYIDDQQIEDKPLHPVLGIFIRGQTQIGKYSGKEETVQFDVQKLRIYCDPEQNNRETA
CEIPGFNGECLNGPSDVGSTLAPCICPPGNPGLQGPKGDPGLPGNPGYPGQPGQDGKPGY
QGIMGSPGVPGSPGMQGVQGLPGYKGEPGRDGEKGDRGLPGFSGLHGVPGSKGEMGPKGD
KGSPGFYGKKGAKGEKGNDGFPGLPGRSGEPGRHGKDGLMGSPGFKGEAGPPGAPGQDGL
RGEPGIPGFPGNQGLMGQKGEIGPPGPQGKKGVPGMHGLMGSDGSPGQPGTPGSKGSKGE
PGPQGMAGPSGLKGEAGAMGPPGEPGYMGLPGIQGKKGDKGDHGEKGIQGQKGENGKQGI
PGQQGIQGHHGAKGERGEKGEPGFRGTIGPKGESGMDGLMGPVGPKGQPGETGPRGPPGL
DGKPGKEFSEQFIRQVCADVLRAQLPVLLRSERIQNCDHCQPQHGSPGIPGPPGPIGPEG
PRGFPGLPGRDGVPGLMGAPGRPGARGLKGLPGRNGAKGNQGFGYPGEQGPPGPPGPEGP
PGISKEGPPGDRGIPGKDGEHGKPGIQGQPGPPGICDPSLCFSVVVGRDPFRKGPNY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgactcggtacattacatttcttcggatggttttggtcctgctccttcagaattctgta
ttaactgaagatggggagataagatcaagttgtcgtactgctccaacagatttagttttc
atcttagatggctcgtatagtgttggtccagaaaactttgaaatagtgaaaaagtggctt
gttaatatcacaaagagctttgacattggaccaaagtttattcaggttggagtggtccag
tatagtgactaccctgtacttgagattccccttggaagccatgattcgggagagaatttg
atagcagcagtggaatccatacattacttgggaggaaacacaaggactggaaaagccatt
caatttgcacttgattatgtttttgccaagtcctcaagatttctgactaagatagcagtg
gtactgacggatggcaaatcccaagatgaagtcaaggatgcagcagaagcagcgagagac
agtcagataaccttatttgccattggtgttggtttagaaatggaagatgcagaactcaga
gctatagccaacaagccctcatctacttatgtgttttatgtggaagactattttgcaata
tccaaaataagggaggtgatgaagcagaagctttgtgaagaatctgtgtgtccaacacga
atcccagtggcagctcgtgatgagaagggatttgatatacttttaggcttgggtgtaaag
aaaaaggttaagaaaagaatccaactctctccaacaaagataaaaggctatgaagtaaca
tcaaaagttgatttatcagaactcacaagcaatgttttcccagaaggtctccctccatca
tatgtatttgtctccactcagagatttaaggtcaagaaaatatgggatttatggagaatt
ttaaccattgatggaagaccacaaatagcagtaactttaaatggtgtggataaaacctta
ttatttacaacgaccagcataattaatggctcacaagtggtcacctttgatgaccctaga
gttaagacattgtttgatgaaggctggcatcaaatccgtctcttagtaacggaacaagat
gtaactctatatatcgatgatcaacaaattgaagacaagcccttacatccagttttaggg
atcttcatcagaggacaaacccaaattggaaaatactctgggaaagaagaaactgttcag
tttgatgtccaaaagctgagaatctactgtgacccagaacagaacaaccgggagacagcc
tgcgagattcctggatttaatggagagtgcctaaatggtcccagtgatgtaggttcaact
ctagctccatgtatatgtccaccgggaaacccaggactacaaggccccaaaggtgaccct
ggactgcctgggaaccctggctaccctggacaacctggtcaagatggtaagcctggatat
cagggaatcatgggatcaccaggtgttccaggatccccaggaatgcaaggagttcaagga
ctaccaggttacaaaggagaaccaggaagagatggtgaaaagggtgaccgtggacttcct
ggtttttctggacttcatggagttccaggatcgaagggtgaaatgggccccaaaggagat
aaaggatcacctggattttatggcaaaaagggtgcaaaaggtgaaaaagggaatgatggt
tttcctggccttcctggacgctctggagaaccaggaagacatggaaaggatggattaatg
ggtagtcctggtttcaagggagaagcaggaccaccaggtgctccagggcaggatggactg
cggggagaacctggaattccagggtttcctggaaaccaaggattaatgggacaaaaggga
gaaattgggcctccaggaccacaaggaaaaaaaggagttccgggaatgcatggtttgatg
ggaagtgatggctcaccaggtcagcctggaacaccaggatctaagggaagtaaaggtgag
cctggacctcaagggatggctgggccttctgggctcaagggagaagcaggagcaatgggt
cccccgggagagccaggatacatgggtttacctgggatacaaggaaaaaagggagacaaa
ggagatcacggtgaaaaaggcattcagggtcaaaagggagaaaatggaaagcaaggaatt
ccaggacaacagggaattcaaggccatcatggtgcaaaaggagagagaggtgaaaaggga
gaacctggtttcagaggtaccattggaccaaaaggagaatctgggatggatggcttgatg
gggcctgtgggtcccaaggggcaaccaggcgaaacaggtcctcggggacccccaggatta
gatgggaagcctgggaaagaattttcagaacagtttattcgacaagtttgcgctgatgta
ttaagagcccagctaccggtcttacttcggagtgagagaattcaaaattgtgatcattgt
cagccgcaacatggttctccgggtattcctgggccacctggtcccataggaccagaaggt
ccccgaggatttcctggtttgccaggaagagatggtgttcctggtttaatgggtgcccct
ggacgcccaggagcaagaggtttaaaaggtctaccaggaagaaacggggcaaaggggaac
caagggtttgggtatcctggagaacaaggccctcctggtcccccaggtccagaaggccct
cctggaataagcaaagaaggtcctccgggagacagaggtatccctggcaaagatggagag
catggaaaacctggaatccaagggcaaccaggacctcctggcatctgtgacccatcgcta
tgttttagtgtagttgttggaagagatccctttaggaaaggaccaaattattag
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