Loxodonta africana (African savanna elephant): 100666447
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Entry
100666447 CDS
T04351
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100666447 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100666447 (CPSF2)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100666447 (CPSF2)
U7-dependent histone pre-mRNA processing factors
100666447 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
100666447
NCBI-ProteinID:
XP_003408878
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVEASSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattatcaaattaactaccctctctggggtccaagaagagtctgctctttgc
tatcttctccaagttgatgagtttagatttttattggactgtggctgggatgaacacttt
tcaatggatattatagattccctgaggaagcacgtccaccagattgatgccgtgctattg
tctcaccccgatcctctccaccttggtgcgctcccgtatgctgttggcaagttgggtctg
aattgcgctatctatgcaaccattcctgtttataaaatggggcagatgttcatgtatgat
ctttatcagtctcgacacaacacagaagatttcacactcttcacattagatgatgttgat
gcagcctttgataaaatacagcagctgaaattctctcagattgtgaatttgaaaggcaaa
ggacatggcttgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttgaatggatgttccctggaaatgctcagcagaccctcgctacttatcacg
gattcgtttaacgctacttacgtgcagcctaggcgaaaacagagagatgagcaacttctg
acaaacgtcctggaaacacttcgaggtgatggaaacgtattaatagcagtggacaccgca
ggcagagttttggaacttgctcaacttcttgatcagatttggagaactaaagatgcagga
ttgggtgtttactcattggccctcctaaataatgtcagttataacgtggtggagttttca
aagtcccaggtagaatggatgagtgataaattgatgaggtgttttgaagacaaaagaaat
aatccattccagtttcgccatctctctttatgtcatggtctttctgacttggctcgagta
cctagccccaaagttgtccttgccagccaacctgacctggaatgtggattttcaagggac
ctctttattcagtggtgtcaggaccctaaaaactcaatcattctaacttatagaactact
cctgggactttggcacgtttcctaattgataacccttctgaaaaaattacagaaatagag
ttgcggaaacgtgtgaagcttgaagggaaggaacttgaggaatacttggaaaaagagaag
ttaaagaaagaggctgctaaaaaacttgaacagtcaaaagaggcagatatagattctagt
gatgagagtgatgttgaagaggatattgaccagccctcggctcacaagactaagcatgac
ctgatgatgaaaggtgaaggtagtcgtaaaggaagtttcttcaaacaggctaaaaagtct
tatcccatgtttcctgccccagaagaaagaattaaatgggatgaatatggagagattatc
aaaccagaggatttcttagtgccagaacttcaagctactgaagaagaaaaaagcaagtta
gaatctggcttgacaaatggagatgaacccatggatcaggatttatcagatgttcctacc
aagtgtatttctacgacagagtccattgaaataaaagccagggtcacctacatagactat
gaaggacgctctgatggggattccattaaaaaaatcattaatcagatgaaaccacgacag
ttgatcattgtccacggacctccagaggccagtcaggatcttgcagagtgctgccgtgcg
tttggtgggaaagatattaaagtgtatatgccaaagctacatgaaacagttgatgccact
agtgagactcatatctaccaggtgagattaaaagactcacttgttagctcccttcagttt
tgtaaggcgaaagatgctgagttagcttggatagatggtgtcctagacatgagagtctcc
aaagtggacacgggagttattttagaagaaggagagctgaaggatgatggagaagactca
gaaatgcaagtggaagcttcttcagattctagcgttatagcacagcaaaaagccatgaaa
agtctgttcggagatgatgagaaagagacaggggaagaaagtgagatcattccaactttg
gaacccttgccacctcatgaggttcctggacatcagtcagtttttatgaacgaaccaaga
ctatcagacttcaaacaagttcttttacgggaggggattcaagctgaatttgtaggcggt
gttcttgtttgcaacaatcaagtagcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtataa
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