Loxodonta africana (African savanna elephant): 100666530
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Entry
100666530 CDS
T04351
Symbol
CDH17
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
100666530 (CDH17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100666530 (CDH17)
Cell adhesion molecules [BR:
lav04515
]
Cadherins
Major cadherins
100666530 (CDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
SKG6
DUF2970
Motif
Other DBs
NCBI-GeneID:
100666530
NCBI-ProteinID:
XP_003408297
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MCEGEIATYPGHGFGLYPPPPHPRGRRERPWLQQVNKPAGRGELQALQDNSWCDASGRRR
GEPNYFVINSHSENNKITVNSQDGKFSGPLKPMTFPIREGQEPSQLIFQGAWETRAVHRL
QVAAVDAHGATVEGPVPITIEVKDINDNRPMFLQPRYEGSVRQNSRPGKPFMYVNATDLD
DPATPNGQLVYQIIIQLPSVNNVMYFQINNKTGAISLTPEGSQELDPVKNPSYNLMVLVK
DMEGQNENSFSDTTSVDIFVKENIWKAPEPVEIEENSTEPHPIKITQVRWNEPGAQYSLA
GVSRLPKFPFSIDQEGDIYVTEPLDREKNDSYVFYAVAKDEQGKPLARPLKISVKVTDVN
DNPPTCPSTKTVFEVQENEIIGSNIGTLIAHDMDQKSTANSILQYKIVEQIPTIPKDGLF
LVQTYSGVFQLAQQSLKKQYAPQYNLTVEVSDKDFKTLCSVDINVIDINNQIPIFEKSNY
GNLTLAEDTNVGSTILTIQATDADEPFTGSSKILYRITEGDSEGRLEIDTDPHTNAGYVK
IKKPLDFETTPLHNIVFKAENPEPLVSGVEYNASSFATFRLFVTNVNEPPLFSQQVFQAK
VYENATIGTKLGNVTAKDPEGLNISYSLREDKRGWLKINPVTGEIFSAGKLDRETESLYR
VQVVATEIGHSSLASVASFHLTLMDVNDNAPRLAKDYTGLFFCHPLKAPESLIFEATDDD
QRSFRGPQFTFALGSESLQKDWEVSRINGTHARLSTRHTHFEERVYDISVRINDMGRPPT
EGTVSLPITFCTCVEGRCFRPVDYQRGKPTVGMAVGILLTVFLVIGIILAVVFIRMKKDK
GKAKTENVQPSEVRPLSS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagggggaaattgccacctaccccgggcatggttttggtctctacccgcccccg
ccccatccccggggccgaagggaaaggccctggctccagcaggtaaataagccagcggga
cgcggtgagctccaggcactgcaggacaattcctggtgtgacgcttccgggcgcaggaga
ggcgagcccaattactttgttattaattctcattccgagaataacaaaataactgtaaat
agccaagatgggaagtttagcggacccctgaagcccatgacatttcccattcgtgaaggc
caagaaccgagccaacttatcttccagggagcttgggaaacaagagctgttcacagactc
caggttgcagccgtggatgctcatggagctacagtggagggcccagtccccatcacgata
gaagtgaaggacatcaatgacaaccgacccatgtttctccagccaagatatgaaggctca
gtgaggcagaattctcgtccagggaagcccttcatgtatgtcaatgctacagacctggac
gatccagccactcccaatggccagcttgtttatcaaattatcatccagcttcccagtgtc
aacaacgttatgtactttcagatcaacaacaaaacgggggcaatctcacttaccccagaa
ggctctcaagaattggaccctgttaagaatccttcctacaatctgatggtcttagtgaag
gacatggaaggtcagaatgagaattccttcagtgacaccacatctgtggatatttttgtg
aaggagaatatttggaaagccccagaacctgtggaaattgaagaaaactcaactgagcct
caccccatcaaaatcactcaggtgcggtggaatgaaccaggtgcacaatattccttagct
ggtgtgtcaaggctgccaaaatttccattttcaattgaccaggaaggagatatttatgtg
accgagcccttggacagagaaaaaaatgattcatatgttttttatgcagttgcaaaggat
gagcaaggaaaacctcttgcaaggccactgaaaattagtgttaaagttacagacgttaat
gataatccacctacatgtccatctacaaagactgtatttgaggtccaggaaaatgaaata
ataggtagcaatattgggactttaattgctcatgacatggatcaaaaaagcactgccaac
agtattttacagtacaaaattgtggagcaaatccccacaattcctaaagatggacttttc
ctggttcaaacctatagtggagtattccagttagctcagcaatccttgaagaagcaatat
gctccccagtacaacttaacagtagaggtgtccgacaaagatttcaagaccctctgttct
gtggacatcaatgttattgatatcaataatcagatccccatctttgaaaaatcaaattat
ggaaacctgactcttgctgaagacacaaatgttgggtctaccatcttaaccatccaggcc
accgatgctgatgagccatttactgggagttctaaaatcctgtatcgtattacagagggt
gacagtgagggacgattggagattgacacagatccccacaccaatgctggatatgtcaag
attaaaaagcctcttgattttgaaacaacacctcttcacaacattgtgttcaaggcggaa
aatcctgagcctctggtgtctggtgttgagtacaatgcaagctcttttgccacattcagg
ctttttgtgacaaatgtgaatgaaccacccctattttcccaacaagtattccaagcaaaa
gtctatgagaatgcaacgataggcactaaactgggcaatgtgactgccaaggatccggaa
ggtctgaatataagttattccctgagagaagacaagagaggttggctcaaaattaaccct
gtcactggtgagatctttagtgcggggaagctggacagggaaactgagagtctatatcgg
gtacaagttgtggccactgaaataggtcactcctccttggcatctgtggcgagtttccac
ctgaccctaatggatgtgaatgataatgccccacggctggccaaggactacacaggcttg
ttcttctgccatcccctcaaagcacctgaaagtttaatttttgaagccactgatgatgat
cagcgatcatttcgaggcccacagtttacgtttgcccttggcagtgagagcttacaaaag
gactgggaagtttccagaatcaatggcactcatgccagactttccaccaggcacacacac
ttcgaagagagagtttacgacatctcagtccgcatcaacgatatgggtcggccacccacg
gaagggactgtctctttaccaattactttctgcacatgtgtggaaggaaggtgtttccgg
ccagtagattaccagcgtgggaagcccactgtgggcatggcagttggtatactcctgacc
gttttcttggtcattggtataattttagcagttgtgtttatccgtatgaagaaggataaa
ggcaaggctaagactgagaatgttcagccatctgaagtcagacctctgagcagttga
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