KEGG   Loxodonta africana (African savanna elephant): 100666738
Entry
100666738         CDS       T04351                                 
Symbol
SYNPO2
Name
(RefSeq) LOW QUALITY PROTEIN: synaptopodin-2
  KO
K24066  synaptopodin-2
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100666738 (SYNPO2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lav04990]
    100666738 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:lav04990]
 PDZ domain-containing proteins
  Other PDZ domain-containing proteins
   100666738 (SYNPO2)
SSDB
Motif
Pfam: Calsarcin PDZ PDZ_6
Other DBs
NCBI-GeneID: 100666738
NCBI-ProteinID: XP_023404380
LinkDB
Position
Unknown
AA seq 1245 aa
MIFAKLYDSNYCLLFYSTQIRSQSKASGSGLCEGDEVISINGNPCADLTYPEVIKLMESI
TDSLQMLIKRPSSGINETLISETENKNHEHLTHEGYVESTTLQIRPATKTQYREFYVASV
KSGVSLVEDEGNGLNCSGNIKEETVLSYQMAPQMPASQSGCMTDEVILREKAETGPMVEL
QLSLSQEEPKATSAPQVAPLGAEKSESPEADTNLQHDETVHINSVPTDEKGDPFLRSSKI
IQISSSKELRVIPGREAGDPGLPRVEVILDCSDRQKTEGCRLQAGKGYVDSSVEGGQSEA
PPSLVFFAVSSEGTEQGEDPRSERDHSRPHKHRARHARLRRSESLSEKQVKEAKSKCKSI
ALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELEREADEEEEGDKEDTCEVAFLG
TSESEVDEELLSDADDNTQVVNFDWDSGLVDIEKKLNRGDKMEMLPDTTGKGALMFAKRR
ERMDQITAQKEEERVSGMPRREPDAAQTDGVRTMTSYQRKEEESVRTQSSVSRSYIEVNQ
GLGNVPQQNGFSGAPETAEAQRMIPMNRTAKPFPGSVNQPATPFSPARNVMSPTADFPAP
PPYSAVTPPPEAFSRGVSSPTAGPTQPPPWPQPAPWSQPAFYDSSERIASRDERIAVPAK
RTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGKRGTGAGGDSGPEEDYLSLG
AEACNFMQGSSGKQKTPPPVAPKPAVKSSSSQPVTPVSPVWSPGVAPTQPPAFPVSNPSQ
GTVVSSIKIAQPSYPPARSTSAVHVAGPFKGPQAAVASQSVTPKPTAPTPTVNTAHAGAV
GPSNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQARAARAQSPTPSLPASWKYSSNVRA
PPPVAYNPIHSPSYPLAAAKSQSSAPQPSNXSKKKGKKPLNALEVMKHQPYQLNASLFTF
QPPDAKDGLPKKSAVKISSAPALKQALPPRPVNASSPTNVQPSSVYSVPAYSSQPTFFAE
ATSPVSASPVPVAIPTSPKQESASSPYFVAPRPKFSAKKSGVAVQESGRSLSLPGRSIPP
TISTIPPWMFQPAYSYSSKSTDGLEKANKRLTPWEAAAKSPLGLVDDAFRPRNIQESIVA
NVVSAARRKVLSGPSESWKEKVSYVPQTQKANMSSSGRQEYSVTSLPDNSMSTNSQYGSQ
LQYAYYRQPSRNDSEIMSMETRSDYCLSVRDCNYNPHPRGWRRQT
NT seq 3738 nt   +upstreamnt  +downstreamnt
atgatttttgccaagttatatgattctaattattgcctccttttttactccactcagatt
cgaagccagagcaaagcctctggatctgggctctgtgagggggatgaagtgatctctatc
aatggcaacccttgtgcagacctcacctaccctgaagtcatcaagctcatggaaagtata
acagactctctccaaatgctcatcaaaagaccatccagtggaataaatgagactttgatc
tctgaaactgaaaacaaaaaccatgagcacctcacacatgaggggtacgtggaaagcacc
accctgcaaattcgaccggccacaaagacccagtacagagagttctatgtcgcctcagtc
aagagcggcgtttccctcgttgaggacgaaggaaacggtctcaattgttcagggaacatc
aaagaagaaacagtcctgagttaccagatggctccccaaatgcctgcctcccaaagtgga
tgcatgacagatgaggttatcttaagggagaaggcagaaacagggcctatggtggagcta
caactgtccctttcacaggaggaacccaaagccactagtgccccacaagtggctcccctg
ggagctgaaaaatctgagtctcctgaggcggacactaatttacaacatgatgagaccgtc
cacataaattcagtccccactgatgagaaaggggaccccttcctgaggtccagcaagata
attcagatctccagcagcaaagagttgagagtgatcccagggagggaagcaggagaccca
ggactgccccgagtggaagtgatcctcgactgctctgacaggcagaagacggaagggtgc
aggcttcaggcaggaaaggggtatgtggattcttcagtggaaggagggcagtcagaagca
cctccttctctggtattctttgcagtctcatcagaaggcacagagcagggggaagatcca
cgctcggaaagggatcacagcagacctcacaagcacagagcgcggcacgcacgtctcaga
aggagcgaaagcctgtcagaaaagcaggtgaaagaagctaaatctaaatgcaaaagtatt
gccctccttctaacagatgcccccaaccccaactccaagggggtgttgatgtttaagaag
cgtcgtcgaagggccaggaaatacaccctagtcagctacggtactggagagcttgagcga
gaggcagacgaggaggaagaaggcgacaaagaggatacctgtgaagtagcatttctgggc
acgagcgagtcagaggtggatgaagagttattgtctgacgctgacgacaacacacaagtt
gtgaactttgactgggattctggactggtggacatcgaaaagaaactgaacagaggggac
aagatggagatgctgccagacaccaccggcaagggggccctcatgtttgctaagaggagg
gagagaatggatcagatcacagcccaaaaagaggaggagagggtgagcggaatgccacgc
agagaaccagatgctgcccagacagacggtgtgagaaccatgacttcctaccaaaggaaa
gaagaagaatcagtgagaacgcagagttctgtgagcagaagttacatcgaagtgaaccaa
ggccttggcaatgtaccccaacagaatggcttcagtggggcacctgagacagccgaggcc
cagaggatgatccctatgaacaggacggcaaagcctttcccagggtctgtgaaccagcca
gcaactcccttctccccagcccgaaatgtgatgagtcctactgctgactttcctgcgcct
cccccttactctgcagtcactcctccacctgaagccttctccagaggagtatcaagtcca
acagctggcccaacacagccacctccatggcctcagcctgccccatggtcccagccagcc
ttttacgattcatctgagcgaatagcttcccgggacgagaggattgcagtgccagcaaaa
agaacagggatattgcaggaagccaaaaggagaagcacaacaaaacccatgttcaccttc
aaggagcccaaagtaagcccaaatcctgaactcttgtcgcttcttcaaaattcagaaggc
aagcggggcactggagctggaggtgattctggacccgaagaagactacctcagcttaggg
gcagaggcttgcaatttcatgcaaggctcctctggtaaacaaaagaccccaccgcctgtt
gctccaaaacctgcggtcaagtcctcatcctcccaaccagtaactccagtttctccagtc
tggtctccaggagtggctccaacccaacctcctgccttccccgtgtcaaacccatcccag
ggcaccgttgtctcctccatcaaaatagcccagccttcttaccctcctgcccggtccaca
agtgctgtgcacgtggctggtcccttcaaaggcccacaggcagcagtagccagtcagagt
gttacacccaagcctacagctcccacaccgactgtgaacactgctcatgctggtgcagtg
ggaccatccaatgagcttccaggaatgagtgggaaaggagcccagctctttgccaaaagg
cagtcgagaatggagaagtatgtggttgattcagataccgtgcaggcccgtgctgcccgt
gctcagtctcccactccgtctctaccggccagttggaagtattcctccaatgtccgagca
cctcctcctgtggcctacaaccctatccactccccctcctacccactggctgctgccaag
tcccagtcttcagcccctcagccctcaaacnnaagcaagaaaaagggcaagaaacccctc
aatgccttggaggtgatgaagcaccaaccatatcagctcaatgcatccttgtttactttc
caacctccagatgcaaaggatggcctccccaaaaagtcagcagtcaagatcagttcagct
ccagccttgaagcaagcacttcctccccggccagtgaatgctagctctcctactaacgtg
cagccttcgtcggtgtactcagtcccagcctacagctctcagcctaccttctttgcagag
gccacttcaccagtcagcgcgtccccagtgcctgtggccattcccacctctccaaagcaa
gaatccgcctcatcaccatattttgtggcaccaaggccgaagttctcagccaagaaaagt
ggtgtcgcagttcaggagagtggacgctccctttctcttcctggaagatcaatcccaccc
accatctccacaatacctccttggatgttccagcctgcttatagctactctagcaaatca
actgatgggctagagaaagcaaacaagagactaactccttgggaagcagcagcaaagtct
cctcttggcctagtggatgatgctttcagacccagaaacatccaggaatccatcgtggca
aacgtggtctcagcagctcggaggaaggtgctctcagggccctcagagagttggaaagag
aaagtgtcttacgtccctcaaacccagaaggccaacatgagctcatctggaaggcaagag
tatagtgtcacatccctacccgataatagtatgtccaccaactcccaatatggttcacag
ttacaatatgcatattataggcagccttccagaaatgattctgagataatgtccatggaa
accaggtctgattactgtttgtcagtcagagattgcaactataacccacaccctaggggg
tggaggcgccaaacatga

DBGET integrated database retrieval system