Loxodonta africana (African savanna elephant): 100666845
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Entry
100666845 CDS
T04351
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1 isoform X2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03082
ATP-dependent chromatin remodeling
lav03083
Polycomb repressive complex
lav04110
Cell cycle
lav04213
Longevity regulating pathway - multiple species
lav04330
Notch signaling pathway
lav04350
TGF-beta signaling pathway
lav04613
Neutrophil extracellular trap formation
lav04919
Thyroid hormone signaling pathway
lav05016
Huntington disease
lav05031
Amphetamine addiction
lav05034
Alcoholism
lav05165
Human papillomavirus infection
lav05169
Epstein-Barr virus infection
lav05200
Pathways in cancer
lav05202
Transcriptional misregulation in cancer
lav05203
Viral carcinogenesis
lav05206
MicroRNAs in cancer
lav05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100666845 (HDAC1)
03083 Polycomb repressive complex
100666845 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100666845 (HDAC1)
04350 TGF-beta signaling pathway
100666845 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100666845 (HDAC1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100666845 (HDAC1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100666845 (HDAC1)
09149 Aging
04213 Longevity regulating pathway - multiple species
100666845 (HDAC1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100666845 (HDAC1)
05202 Transcriptional misregulation in cancer
100666845 (HDAC1)
05206 MicroRNAs in cancer
100666845 (HDAC1)
05203 Viral carcinogenesis
100666845 (HDAC1)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
100666845 (HDAC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100666845 (HDAC1)
05165 Human papillomavirus infection
100666845 (HDAC1)
09164 Neurodegenerative disease
05016 Huntington disease
100666845 (HDAC1)
09165 Substance dependence
05031 Amphetamine addiction
100666845 (HDAC1)
05034 Alcoholism
100666845 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100666845 (HDAC1)
Enzymes [BR:
lav01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100666845 (HDAC1)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
100666845 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
100666845 (HDAC1)
BRAF-HDAC complex
100666845 (HDAC1)
REST complex
100666845 (HDAC1)
SHIP complex
100666845 (HDAC1)
MiDAC complex
100666845 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100666845 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100666845 (HDAC1)
Chromatin remodeling factors
NuRD complex
100666845 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100666845
NCBI-ProteinID:
XP_003415511
UniProt:
G3SV40
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MAQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FRPVISKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHSKCVEFVRNFNLPMLMLGG
GGYTIRNVARCWTYETAVALSTDIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
LA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagactcagggcaccaagaggaaagtctgttactactacgacggggatgttgga
aattactattatggacaaggtcacccaatgaagcctcaccgaatccgcatgactcacaat
ttgctgctcaactatggtctctaccgaaagatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagtgatgactacattaaattcttgcgctccatccgc
ccagacaacatgtctgagtacagtaagcagatgcagagattcaacgttggtgaggactgt
ccagtatttgatggcctgtttgagttctgtcagttgtctgctggtggatctgtggcaagt
gctgtgaaacttaataagcagcagacggacatcgctgtgaattgggctgggggcctgcac
catgcaaagaagtccgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccatggt
gatggagtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataag
tatggagagtacttcccaggaacaggggacttacgggatattggcgctggcaaaggcaag
tattatgccgttaactacccgctccgagatgggattgatgatgagtcctatgaggccatt
ttcaggccggtcatatccaaagtaatggagatgttccagcctagtgcagtcgtcttacag
tgtggctctgactccctctctggggatcgattaggttgtttcaatctgaccatcaaaggg
cattccaagtgtgtggaatttgtgaggaatttcaaccttccgatgctgatgctgggagga
ggtggctacaccattcgtaatgtcgccaggtgttggacgtatgaaacagctgtggccctg
agcacagatatccctaacgagcttccatacaatgactactttgaatactttggaccagat
ttcaaacttcacatcagtccttccaatatgaccaaccagaacactaatgagtacttggag
aagatcaaacagagactatttgagaacctgagaatgttgccccacgcacctggggttcaa
atgcaggcgattcctgaggatgccattccagaggaaagcggtgatgaggatgaagaggac
cctgacaaacgcatctcgatctgttcctctgacaaacgaattgcttgtgaagaagagttc
tctgactccgatgaggagggagagggtggccgcaagaactcttccaacttcaaaaaagcc
aagagagtcaaaacagaggatgaaaaagagaaagacccagaagagaagaaagaagtcaca
gaagaagagaaaaccaaggaggagaagccggaagccaaaggggtcaaggaggaggtcaag
ttggcctga
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integrated database retrieval system