Loxodonta africana (African savanna elephant): 100667310
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Entry
100667310 CDS
T04351
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04115
p53 signaling pathway
lav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100667310 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
100667310 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lav04121
]
100667310 (COP1)
Enzymes [BR:
lav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100667310 (COP1)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100667310 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100667310 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
zf-C3HC4_2
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
Sina_RING
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100667310
NCBI-ProteinID:
XP_010589292
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSGSRPAGSGSAGKSPGSSAASSLTSASSSLSSSPSPPSVAASAAALVSGGAAQAAGSGG
LGGPVRPVLVAAAASGSGGGAVSVGPSRLSCAARPSPGVGGSSSSLGSGSRKRPLPTPLC
NGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNI
DHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQMLQDVLGTDQDNLDLANVNF
MLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS
GLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRL
TAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSRFTRYNSVRPLATLSYASDLYNG
SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSS
YHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKL
WSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRK
AVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSE
NNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAAN
SQGTIKVLELV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtagccgcccggccggatcgggctccgctgggaagagccctggctcctcggcg
gcctcctcgttgacttccgcctcctcgtccttatcctcttccccgtcgcccccttccgtg
gcggcttcggcggcggcgctggtgtccggcggagcggcccaggccgcgggctcgggcggc
ctcgggggcccggtgcggcctgtgctggtggcggccgcggcgtcgggcagcggcggcggg
gcggtgtccgtgggcccgtcccggctcagctgcgcggccaggcccagccccggcgtaggt
gggagcagctccagcctaggcagcggcagcaggaagcgacctctgcccaccccgctctgc
aacgggctcatcaactcctatgaagacaaaagcaacgacttcgtctgccccatttgcttt
gatatgatcgaagaagcatacatgacgaaatgtggccacagcttttgctacaagtgtatt
catcaaagtttggaggacaataatagatgtcccaagtgtaactatgttgtggacaacatt
gaccatctgtatcctaatttcttggtgaatgagctcattctcaaacagaagcaaagattt
gaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggccacagatggcaa
atgcttcaggatgtcttgggaactgaccaagataaccttgatttggctaatgtcaacttc
atgctggagttactagtgcagaagaagaaacaattggaagcagaatcacatgcagcccaa
ctacagatccttatggaattcctcaaggttgcaagaagaaataagagagagcaactggaa
cagatccagaaggagttaagtgtcctggaagaggatattaaaagagtggaagaaatgagc
ggtttatactctcctgtcagtgaggatagcacagtgcctcaatttgaagctccctctcca
tcacacagtagtattattgattccacagagtacagccaacctccaggtttcagtggcagt
tctcagacaaagaaacagccttggtataacagcacattagcatcaagacgaaaacgactc
actgctcactttgaagacttggagcaatgctacttttctacaaggatgtctcgtatttca
gatgatagtcgaactgcaagccagttggatgaatttcaggaatgtttgtccaggtttact
cgatataattcagtacgacctttggccacattgtcatacgctagtgatctttacaatggt
tccagcattgtctctagtattgaatttgaccgggattgtgactattttgctattgctggg
gttacaaagaagattaaagtctatgaatatgacacagtcatccaggatgcagtggatatt
cattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagttggagtagt
tatcataagaacttgttagctagcagtgattatgaaggcactgtcatcctatgggatgga
ttcacagggcagaggtcaaaggtctatcaggagcatgagaagaggtgttggagtgttgac
tttaatttgatggatcctaaactcttggcttcaggttctgatgatgcaaaagtgaagctg
tggtctaccaacctagacaactccgttgcgagcattgaggccaaggctaacgtgtgctgt
gtcaaattcagcccctcttctagataccatttggctttcggctgtgcagatcactgtgtc
cactactatgatcttcgtaacactaaacagccaatcatggtattcaaaggacaccgaaaa
gcagtctcctatgcaaagtttgtgagtggtgaggaaattgtctctgcatcaacagacagt
cagctaaagctgtggaatgttgggaaaccatattgcctacgttccttcaagggtcatatc
aatgaaaaaaactttgtaggcctggcatccaatggagattatatagcttgtggaagtgag
aacaactctctctacctgtactataaaggactttctaagacattgttaacttttaagttt
gacacggtcaaaagtgtcctggacaaagaccgaaaagaagacgatacaaatgaatttgtt
agtgctgtatgctggagggcactgccagatggggagtccaatgtgctgattgctgctaac
agtcagggtacaattaaggtgctggagttggtttga
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