Loxodonta africana (African savanna elephant): 100667894
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Entry
100667894 CDS
T04351
Symbol
FDPS
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav00900
Terpenoid backbone biosynthesis
lav01100
Metabolic pathways
lav05164
Influenza A
lav05166
Human T-cell leukemia virus 1 infection
Module
lav_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100667894 (FDPS)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100667894 (FDPS)
05164 Influenza A
100667894 (FDPS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lav01006
]
100667894 (FDPS)
Enzymes [BR:
lav01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
100667894 (FDPS)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
100667894 (FDPS)
Prenyltransferases [BR:
lav01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
100667894 (FDPS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
100667894
NCBI-ProteinID:
XP_003414979
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MSQAQPTRGQSILVQEVEGWGGGDLGCCHCASAIGPCPCRECSVPPPHATPTMPPSRWLR
SAGVFLLPAPCWVPRVRWLGLLRQPSLVHGCPVLGAWHSARRWCQAWTEERRALCSFLRM
NGDQKSDAYAREKQNFIQHFSQILKVLTENEMGHPEMGDAIVRLKEVLEYNVIGGKYNRG
LTVLAAFQELVEPRKQDGDSLQQALAVGWCVELLQSFFLVLDDIMDSSLTRRGQLCWYQK
PGIGLDAINDALLIEACIYRLLKLYCREQPYYLNLIELFLETSYHTEIGQTLDLITAPQG
NVDLGRFTEKRYKSIVKYKSGFYSFYLPVAAAMYMAGIDGEKEHANAKKILLQMGEFFQI
QDDYLDLFGDPTVTGKVGTDIQDNKCSWLVVQCLQRASPEQRQILQENYGQKEPEKVARV
KALYEELQLPAAFKQYEEDSFSKLVGLIEQYAAPLPPAIFLGLAHKIYKREK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagctcagcccacaagagggcagagcattctggtccaggaagtagaaggttgg
ggtgggggtgacctggggtgttgccactgtgcatctgccatcggtccttgcccctgcagg
gagtgctcggtgccccctccccatgccacccccacgatgcctccgtcccgctggctgaga
tctgcgggggtcttcctgctgccagccccctgctgggtgccccgggtgaggtggctgggt
ctcctacggcagccctccctggtgcatgggtgcccagtcttgggggcctggcacagtgcc
cgccgctggtgccaagcgtggacagaggagcgtcgagcactttgctccttcctcagaatg
aatggagaccagaaatcagatgcttatgcccgagaaaagcagaatttcatccagcacttc
tcccagattctcaaggtgctgacggagaatgagatgggacacccagagatgggagatgct
attgtccggctcaaggaggtcctggagtacaatgtcattggaggcaagtacaaccgaggt
ttgacggtactggcagcgttccaggagttggtggagccaagaaagcaggatggtgatagt
ctgcagcaggctctggccgtgggctggtgtgtggagctgctccaaagtttcttcctggta
ttagatgacataatggattcatccctcacccgacggggacagctctgctggtatcagaag
ccaggtataggtttggatgccatcaatgacgctctgctgatagaagcgtgtatctaccgc
ctgttgaagctctactgccgggagcagccctattatctgaacctgatcgaactcttcctg
gagacttcctatcacactgagattggacaaaccctggacctcatcactgccccccagggc
aacgtggatcttggcagattcactgaaaagaggtacaaatccattgtcaagtacaagtca
ggtttctactccttttaccttcctgtagctgctgcaatgtatatggcaggcattgacggg
gagaaggagcatgccaatgccaagaagatcctgctgcagatgggagagttctttcagatt
caggatgattaccttgacctctttggtgaccccactgtgacgggcaaggttggcactgac
atccaggacaacaaatgcagctggctggtggttcagtgtctgcagcgggcctctcccgaa
cagcgccagatcctgcaggagaattatgggcagaaggagcctgagaaggtggcccgggtg
aaggcactgtacgaggagctgcagctgcctgctgcgttcaagcagtacgaggaagacagt
ttcagcaaacttgtgggcctcatcgagcagtatgctgctcccctgcccccagctatcttt
ctggggctagcacacaagatctacaagcgggaaaagtga
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