Loxodonta africana (African savanna elephant): 100668198
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Entry
100668198 CDS
T04351
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03040
Spliceosome
lav05202
Transcriptional misregulation in cancer
lav05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100668198 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100668198 (DDX5)
05205 Proteoglycans in cancer
100668198 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lav03041
]
100668198 (DDX5)
03009 Ribosome biogenesis [BR:
lav03009
]
100668198 (DDX5)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100668198 (DDX5)
Spliceosome [BR:
lav03041
]
Complex A
U1 snRNP components
U1 related factors
100668198 (DDX5)
Complex B
100668198 (DDX5)
Ribosome biogenesis [BR:
lav03009
]
Eukaryotic type
Pre-60S particles
Helicases
100668198 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
100668198
NCBI-ProteinID:
XP_003417352
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQDVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTENGVYSAAAN
YTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGTSVPNMHNGMNQQAAYAYPAT
AAAPMIGYPMPTGYSQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttattcgagtgaccgagaccgcggccgggaccgagggtttggggcacctcga
tttggaggaagcagggcagggcccctgtctggaaagaagtttggaaatcctggggagaag
ctagttaaaaagaagtggaatcttgacgaactgcccaaatttgagaagaatttttaccaa
gaacaccctgatttggctaggcgcacagcgcaagatgtggagacatacagaagaagtaag
gaaattacagttagaggccacaactgcccgaagccagttttgaatttttatgaggcaaac
tttcctgcaaatgttatggatgtgattgcaagacagaactttactgaacctactgctatt
caagctcagggatggccagttgctttaagtggattggatatggttggagtagcacagact
ggatccgggaaaacgttgtcttacttgctgcctgccatcgtccacatcaatcatcagccg
ttcctagaaagaggtgatgggcctatttgcttggtgctggcgccaactcgggaactggcc
caacaggtacagcaggtagctgctgaatactgtagagcatgtcgtttgaagtctacttgc
atctatggtggagctcccaaaggaccacagatacgtgatttggagagaggtgtggaaatc
tgtatcgcaacacctggaagactaattgacttcttagagtgtgggaaaaccaatctgaga
agaacaacttaccttgtccttgatgaagcagatagaatgctcgatatgggctttgaaccc
caaataaggaagattgtggatcagataagacctgataggcaaaccctaatgtggagtgcg
acttggccaaaagaagtaagacagcttgctgaagacttcctgaaagattacattcatata
aacattggtgcactagaactgagcgcaaaccacaacatccttcagatcgtggatgtgtgt
catgatgtggaaaaggatgaaaaacttattcgtctaatggaagagatcatgagtgagaag
gagaataaaactattgtttttgttgaaaccaaaagaagatgtgatgaacttaccagaaaa
atgaggagagatgggtggcctgccatgggtatccatggtgataaaagtcagcaggagcga
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgaacgatcttatttctgtgctt
cgagaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagagggtca
ggtcgttccaggggtagaggaggcatgaaggatgaccgccgggacagatactctgcaggc
aaaaggggtggattcaatactttcagagacagggaaaattatgacagaggttattctagt
ctgcttaagagagattttggggcaaaaactgagaacggtgtttacagtgctgctgcaaat
tacaccaatgggagctttggaagtaattttgtgtctgctggtatacagaccagttttagg
actggtaatccaacagggacttaccagaacggttatgatagcactcagcaatatggaact
agtgttccaaatatgcacaatggtatgaaccaacaggcggcatatgcctatcctgctact
gcagctgcacctatgattggttatccaatgccaacaggatattctcaataa
DBGET
integrated database retrieval system
