Loxodonta africana (African savanna elephant): 100669212
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Entry
100669212 CDS
T04351
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3 isoform X2
KO
K12830
splicing factor 3B subunit 3
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100669212 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100669212 (SF3B3)
03041 Spliceosome [BR:
lav03041
]
100669212 (SF3B3)
03036 Chromosome and associated proteins [BR:
lav03036
]
100669212 (SF3B3)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100669212 (SF3B3)
Spliceosome [BR:
lav03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100669212 (SF3B3)
Complex B
100669212 (SF3B3)
Complex C
U2 SnRNP specific factors
100669212 (SF3B3)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
100669212 (SF3B3)
TFTC complex
100669212 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
100669212
NCBI-ProteinID:
XP_003417122
UniProt:
G3T8Z4
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtataacttgaccttgcagcgagccactggcatcagctttgccattcatggc
aacttttctggaaccaaacaacaggaaattgttgtttctcgtggaaagatcttggagctg
cttcgccctgatcccaacactggcaaagtacacacccttctaactgtggaagtatttggt
gttatccgatctctcatggcctttaggctgacaggtggcaccaaagactacattgtggtt
ggcagtgactcaggccggattgttatcctggagtaccagccatctaagaatatgtttgag
aaaattcaccaagagacctttggcaagagtggatgccgccgcatcgttcctggccagttc
ttagctgtagatcccaaaggacgagctgttatgatcagtgccattgagaaacagaaattg
gtatatattttgaacagagatgctgcagcccggcttaccatttcatctcccctggaagct
cacaaagcaaacactttagtgtatcatgtggttggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagctgacaatgatccaacaggcgaagca
gcagctaatacccagcagacacttactttctatgagttagaccttggtttaaaccacgtg
gtccgaaaatacagtgaacctttggaggaacatggcaacttccttattacagttccagga
gggtcagatggtccaagtggagtactgatctgctctgaaaactatatcacctacaagaac
tttggtgaccaaccagatatccgttgtcctattcccaggagaaggaatgacctggatgac
cctgagagaggaatgatttttgtctgctctgccacccataagaccaaatcgatgtttttc
tttttggcccaaaccgagcaaggagatatcttcaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctctttgtagcatcagaatttggaaaccattacttatatcag
attgcacaccttggagatgatgatgaagaacctgagttttcatctgctatgcctctggaa
gaaggagacacgttcttctttcagccaagaccgctcaaaaaccttgtgctggtcgacgag
ttggatagcctctctcctattctgttttgccagatagccgatctggccaatgaagacact
ccacagctatatgtggcttgtggtaggggacctcgatcatctttgagagtcttaaggcat
ggacttgaggtgtcagaaatggccgtctctgagctacccggtaatcccaatgctgtctgg
acagtacgtcgtcacattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccacccttgtgttgtccattggagagactgtagaagaagtgactgattccgggttcctt
ggcaccactccaacattatcgtgctccttgttaggagatgatgccttggtgcaggtgtat
ccagatggcattcggcacatacgagcagacaagagagtcaatgagtggaagactccgggt
aaaaaaacaattgtgaagtgtgcagtgaaccagcggcaagtggtgattgccctgacagga
ggagagctggtctactttgagatggatccctcagggcagctgaatgagtacacagagcga
aaagagatgtcggcagatgtggtgtgcatgagcctggccaatgtaccccctggagagcag
cggtctcgattcctggctgtggggctggtggacaacaccgtcagaatcatctccctggat
ccctcagactgtttgcaacctctgagcatgcaggctctccccgcccagcctgagtccttg
tgtatcgtggaaatgggtgggactgagaagcaggatgagctgggtgagaggggctctatt
ggcttcctctacctcaatattgggctgcagaatggtgtgctgctaagaacggtcctggac
cctgtcactggggatctgtctgacacacgcactagatacctggggtcccgtcctgtgaaa
ctttttcgtgtccggatgcaaggccaggaggcagtgttagccatgtcaagccgctcatgg
ttgagctattcttaccagtctcgttttcatctcactcccctgtcttatgagacgttggaa
tttgcatctggcttcgcctctgaacagtgtcctgaaggcatcgtagctatctccaccaat
acgctgaggattttggcattggagaagctaggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacgcccagaaaatttgtcatccaccctgagagtaacaacctcatcatcatt
gagactgaccacaacgcctacactgaggccacaaaagctcagaggaagcagcagatggca
gaggaaatggtggaagcggcaggggaggatgagcgagagctggctgcagagatggcagca
gcattcctcaatgaaaacctccccgagtccatttttggagctcccaaggctggcaatgga
cagtgggcctctgtgatccgtgtgatgaatcctattcaagggaacacattggacctagtc
cagctggagcagaatgaggcagcttttagtgtggctgtgtgcaggttctccaacactggt
gatgactggtatgtgctagtgggagtggccaaggacctaatcctgaacccccgatctgtg
gcgggaggctttgtctatacctacaagcttgtgaacaatggggaaaaactggagtttttg
cacaagactccagttgaagaggttcctgctgccattgccccattccaggggagggtgttg
attggtgtggggaagcttctgcgagtctatgacttagggaagaagaaattacttcgaaag
tgtgagaataagcatattgccaattacatctctgggatccagaccattgggcacagggta
attgtgtctgacgtccaagaaagtttcatctgggtccgctacaagcgtaatgagaatcag
ctcatcatctttgctgatgatacttatccccgatgggtcactacagctagcctccttgac
tatgacactgtggctggtgcagacaagtttggcaacatttgtgtggtgaggctcccacct
aacaccaatgatgaggtggatgaggatcccacaggaaacaaagccctttgggaccgaggc
ttgctcaatggggcctcacaaaaggcagaggtaatcatgaactaccatgttggggagaca
gttctgtcattacagaagactacactgatccctggaggctccgaatcacttgtctatacc
accttgtcaggtggaattggcattcttgttccattcacatcccatgaggaccatgacttc
ttccaacatgtggagatgcacctaaggtcagagcatcctcctttgtgtgggcgggaccat
ctcagctttcgttcctattactttccagttaagaatgtgattgatggagatctctgtgag
cagttcaactccatggagcccaacaaacagaagaatgtctctgaagaactggaccggacc
ccaccagaggtgtccaagaagcttgaggatatccgaacccgttatgccttctga
DBGET
integrated database retrieval system
