Loxodonta africana (African savanna elephant): 100669647
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Entry
100669647 CDS
T04351
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100669647 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lav04091
]
100669647 (FREM1)
Lectins [BR:
lav04091
]
C-Type lectins
Lecticans
100669647 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
100669647
NCBI-ProteinID:
XP_023401132
LinkDB
All DBs
Position
Unknown
AA seq
2124 aa
AA seq
DB search
MDKLPPVSMASQEWGGPSTLLALLLLLLLLGRASPTFVSVNLGVTVMKGHSAYLSGDNLK
FAVPKEKDACKVEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYVHNGCPILDEDTVKLRL
YRFTDTDTFTETFILRIYLLEPDCNIIQMSSSVLEVSEFYGLSRAIDKNLLSFDYGRAAN
LECTVRLDPVGTWLPAHGQMVLVEPGAEEPRGDQPHSFLPESQLGTELRCPGGSCTIGLK
KVGSLKVSCEEFLLMGLRYQHLDPPSPNIDYISIQLDLTDSRSKIIYKSESAWLPVHIRA
GIPNQVPRAAFTATFILEVDQFILTSLTTSVLDCEDDETPKSLLVFNITKPPLQGYMTHL
LDHTKPITSFTWKDLNGLQIAYQPPNSSHSERRNYEVELEVYDFFFGKSTPITVHISIRT
SDTNAPRVSWNAGLNLLEGQSRAITWEQFQIVDNDDIGAVRLVTVDGLLHGSITLRGGKG
FLFTVADLQAGVVRYHHDDSDSTKDFVVFRIFDGHHSIRHKFPINILPKDDSPPFLITNV
VIELEEGQTILIQGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPGPGLIGYPVPGFLQ
RDLFNGIIYYRHFGAEIFEDSFEFVLWDSHEPPNLSVTQVVTIHIMPVDDQLPKEAPGVS
RHLVVKETEVAYITKKQLHFIDTESYERELLYTITTPPFFSVSHRHLDAGKLFLVDSIPK
LTKNPTALGLRSFTQHAVNYMKVAYMPPMQDIGPHPQHVQFTFSISNQHGGILHGICFNI
TILPVDNQVPEVFTNPLRVAEGGQCVISTEHILVSDADTKLDNIYLSLQRPPLHGRVELN
GLPLNTGSTFSWEDLHALKIRYQHDGSEVLQDDILLEVTDGTNSAEFVLHIKVFPVNDEP
PVLKADLIPMMHCSEGEEVVITSEYIFATDVDSDDSRLVFMIARKPQHGVVRKAGIITDQ
FSQGDVISRAVTYKHTGGEIGLMPCFDTITLVVSDGQAGPFVNGCCYSGAHPSVPLHESF
PVYDLNITVHPVDNQPPSIAIGTMFVVDEGLSASVTINHLSATDPDTAADDLEFVLVSSP
QFGYIENTLPSAGFEKSNMGKSIASFQWKDMKALHVNYVQSKHLRIEPTADQFMVYVTDG
KRRSLEIPFHVIINPTNDEAPDFIVQNITVREGQMRELGSSVINAADLDIPKDSLLFTIT
HEPRHGLLINGVFSEGLPQYKQPANPDQKHHLVHNFSMELLKTGMRLLYVHDDSESLADD
FTIQLSDGKYKLVKTISVEVTPVNDQKPVLTKKAEIVMNMGETRIISNAVLSATDEDSPR
EKIYYLFERLPQNGQLQLKIGRDWVPLYPGMKCTQEEVDLNMLRYTHTGAVDSQNKDSFT
FYLWDGDNRSPAFECHITIKDIGKGKCMFMVKQESMLKAALPLFVRFIVSNGLRTKHGVF
EVTLETVDKALPVVTMNKGLRLIKGATGLLTPDLLQLTDPDTPLEKLTFLLAQLPQHGQL
FLRGTALLHPNFTQQDVDSKNVAYRHSGGDSQIDQFTFTATDRTNQGFVVDGRVWEEPVS
FTIQVDQLDKMAPHITYLRSPSQVGLLKNGCYGIYITSRVLKASDPDTEDDQIIFKISQG
PQHGHLENTTTGEFIHEKFSQKDLNSKTILYIINPSREVNSDVMEFQIMDPTGNSAPPQI
LELKWSHIEWSQTDYEVCEDVGVFPLEITRTGFLMDSAFVSVKVNPVSATVGKDFTVTPS
KLIQFDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDSKGGQC
HRSYHSNQNKHKAREKGIWHPLHRGSSSPTTSGSFHLERKPFVSSMRLAVTRGDSPRGFD
STDLSRMRLRPRGNGRTIHPSSVYRNGTDIIYNYHGTVSLKLEDDSSSTHKRKAKVSVIS
CPQKTIKVAELPQADKVESTTDSHFPRQDQLPSFPKNCTLELKGLFYFEESLQKLYQCNG
TAWKAWSPQTKEVEDKPCPAGWHHHSGYCHSLITEQKRTWTAAAQACREEHLGSLVTVLT
RQHMRWLWDISGRRPFWIGLNDQVHAGYWEWIGGEPVTFTNWRKVTHQHSKPGKNCVLVH
RQGKWQTKDCRQGKPHSYICSRKL
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgccccctgtcagcatggcctctcaggaatggggtgggcccagcaccctg
ctggccctgctgctgctgctcctgctcctgggccgggccagccccacctttgtcagtgtg
aacctcggagtgacagtgatgaagggtcactccgcctacctgtcaggggacaacctgaag
tttgctgtccccaaagagaaagatgcctgcaaagtggaagtggtaatgaatgagcccatc
acccaaagggttgggaaactcacgccgcaggtatttgactgccattttcttcccaatgaa
gtaaagtatgttcacaatggctgcccaattcttgatgaagacacagtgaagcttagactt
tataggtttactgacacagacaccttcacggaaacctttatcctgcggatctatctcctg
gaaccagactgtaacattatccaaatgagtagcagtgtgctggaggtgtctgaattctat
ggtctgtcccgggccatcgataagaacttgctcagctttgattatggtagggcagctaac
ctggagtgtactgtcaggctggaccctgtgggaacctggctgcccgcccacggccagatg
gtcctggtggagcctggagcagaggaacctcgtggagatcagccgcacagttttctccct
gagtcccaactgggaacagaactgaggtgtccaggtggaagctgtaccataggactgaag
aaagtaggaagtctcaaagtgagctgtgaggagttcctgctgatgggacttcgatatcaa
catctggatcccccttcacccaacattgattacatctccatccaactggacctcacagat
agcaggagcaaaatcatatataagtcagagagtgcgtggttacctgtccacatcagagcc
ggcattccgaatcaggttccaagggctgctttcacggccacgtttattctggaagtggat
cagttcatcctgacctctctgaccacatcggttctggactgtgaagatgatgagaccccc
aaatccttgctggtgttcaacatcactaaacccccactccagggctatatgactcacctg
ttggatcacaccaaacccatcacctccttcacctggaaagatctaaatggcctgcagatt
gcctaccagccaccaaacagcagccattctgagaggaggaattacgaggtggagttggaa
gtgtatgacttcttctttggaaagagcacaccgattacagtccacatctccatcagaact
tcagatacaaatgccccgcgagtatcctggaacgcaggtctgaatctcttggaggggcaa
tctcgggctatcacttgggaacaatttcagattgtagacaatgatgacattggcgctgtc
cgtctagtcaccgttgatggactactacatggaagtattacactaagaggtggaaaagga
tttctcttcaccgttgctgacctacaggctggagttgttcgctatcatcatgatgacagt
gattccaccaaagactttgtggtctttaggatcttcgatggccaccacagcatccgccat
aagtttcccatcaacatcttgcccaaagatgatagtccgccgttccttataaccaatgtc
gtgattgaactggaggagggacagactatactgatccagggttctatgctgagagcttca
gacatggattctagtgatgactacatcttctttaatatcacaaaacccccacaggctgga
gagatcatgaagaagccaggaccaggactgataggctatcctgttcctggcttccttcag
agagacctgtttaatgggatcatttactaccgtcactttggtgcagaaatctttgaagat
tcttttgaatttgtcctgtgggatagccatgaacctccaaatctttcagtgactcaagtg
gtgacaatccatattatgccagtggatgaccagcttccaaaagaggctcctggagtttct
cggcatttggttgtcaaggaaaccgaggtggcctacataactaagaaacagctacatttt
atagatacagaatcctatgagagggagctgctttacacaataacaacgcctccatttttc
tctgttagccacagacatttggatgctgggaaattattcctggtggacagcataccaaag
ctaaccaaaaaccctacagccctggggctgaggtcattcactcagcatgctgtgaactat
atgaaggtggcctacatgccacccatgcaagacataggccctcatccccaacatgtccag
ttcacgttttccatcagtaaccaacatggtggcattttgcatggaatctgctttaacatc
accattctcccagtggacaatcaagtgcctgaggtctttaccaaccctctgagagtggca
gagggaggtcagtgtgtcatcagcacagaacacattctggtttctgatgcggatactaag
ctggacaatatctacctctccctccagcgaccacctctccatggaagggtggaacttaat
ggattgcctctaaacacgggaagcacattttcttgggaagaccttcatgccttaaaaatt
aggtatcagcatgatggatctgaggttcttcaggatgacatactcttggaggtcacagat
ggcacaaattccgcagaatttgttctacacatcaaggtattccctgtaaatgatgagcca
ccagtcctaaaggctgacctcatccccatgatgcattgctcagagggtgaagaggtggtc
atcacctctgaatacatttttgctactgatgtggacagtgatgactcgagactggtgttt
atgattgcacggaaacctcagcatggagtggtgaggaaagctggaattataacagatcag
ttctctcagggagatgttatctcaagagctgtgacgtacaaacacacaggtggcgagatt
ggcctgatgccctgttttgacaccattacattggtggtttcggatggacaagctggccct
ttcgtgaatggctgttgctacagtggggctcacccatctgtccctcttcatgagtctttc
ccagtgtatgacctcaacatcacagtacatccagtggacaaccagccaccttccattgca
atcggtaccatgtttgttgtagatgagggtctctcagcctcggtaaccattaaccatttg
tccgccactgaccctgacactgcagcagatgacttggagtttgttttggtttcttcaccc
cagtttggttacattgaaaacacactcccttctgcaggttttgaaaaaagcaatatgggc
aaaagtatagcttcattccagtggaaagacatgaaggcattgcacgttaactatgtgcaa
tcaaagcatctgagaatagaaccaaccgctgatcagttcatggtgtacgtcacagatggg
aagcgacgctccttggaaataccatttcacgttataatcaaccccacaaatgatgaagct
cctgacttcatagtgcagaatattactgtacgggagggtcagatgagagagctgggttct
tctgttatcaatgccgctgacctggacatccccaaggactccttgctgttcaccatcact
catgaacctcgccatggcctcctcatcaacggggtgtttagtgaaggcctccctcagtat
aaacagccagcaaaccctgaccagaagcatcaccttgttcacaacttttccatggaactt
ctcaagactggaatgaggttgctgtatgtacatgatgactctgagagccttgctgatgac
ttcacaatccagttgtcagatgggaaatataaactagttaaaaccatttcagtagaggtc
accccagttaatgatcagaaaccagtgttgaccaagaaggcagaaattgtgatgaatatg
ggtgaaactcgtattatttccaatgctgttctttcggccacagatgaagactcacctagg
gagaagatttactacttatttgaaaggcttccccaaaatgggcaacttcagcttaagata
gggagggactgggtcccgctctaccctggcatgaaatgtactcaggaggaagtggacctg
aacatgctgagatacacacacactggggcagtggattcccagaacaaagacagcttcacc
ttctacctgtgggatggtgacaacaggtcaccagcatttgagtgtcacatcaccatcaag
gacattggaaaaggtaaatgcatgttcatggtgaaacaagaatccatgttgaaggctgcc
ttgcctctctttgtcagattcattgtcagcaatggactgcggacaaagcacggggtgttt
gaggtcacactggagactgtggacaaagccttgccggtggtgacgatgaacaaaggattg
agactgatcaaaggcgccacaggcctacttacccctgacctccttcagctgactgaccct
gacactccactggagaaactcaccttcctcctggcccagctcccacaacatggccaactc
tttctgcggggcacagcgctgcttcatcccaatttcactcaacaggatgtggacagcaag
aacgtggcttataggcactcaggaggggactcccagattgaccaatttacttttacagcc
acagataggacaaaccaaggctttgttgtggatgggagagtgtgggaagaacctgtttca
ttcaccatccaggtggaccagttggacaaaatggcgccccacatcacatacttgcgttcc
ccttctcaagtgggactcctgaaaaatggctgttacgggatttacatcacctcccgtgtg
ctgaaggcctctgacccagacaccgaggatgatcagatcatctttaagatttcacaaggc
ccacaacatggacatctggagaacacaacaacgggtgaatttatccatgaaaaatttagc
caaaaggacttaaacagtaagaccattctttacatcataaatccatctcgggaagtaaat
tcggatgtcatggaatttcaaatcatggaccctacagggaactctgcccctcctcaaatc
ttggaattgaagtggtctcatattgaatggtcacagactgactatgaggtctgtgaggat
gtgggcgtgttccccttggaaatcaccagaacgggattcctcatggactcggcctttgtg
agtgtgaaggtcaacccagtgtcagctacagttggaaaagatttcactgtgactccatct
aagctgattcagtttgacccaggaatgtcaactaagatgtggaatatagcaattacctat
gacggattagaggaagatgatgaggtctttgaagtaattctgaactccccagtgaatgcg
gttcttggcacaaagacaaaagctgcagtgaaaattttggactcaaaaggaggacagtgc
catcgttcatatcactccaaccaaaacaagcacaaagcgagagagaagggcatttggcat
ccactgcaccgagggtcttcctcacccaccacttctggttcctttcatttggaaagaaaa
ccctttgtatcttccatgagactagcagtcaccagaggagacagcccacggggctttgat
tctacggatctttctcgaatgaggcttcggccccgtgggaatggcagaacaattcatccc
tcctctgtttacagaaatggaacagacatcatctataattatcatgggacagtttctctg
aaactggaggatgacagttcctccactcacaaacggaaggccaaagtctctgtcattagc
tgcccacagaagacaatcaaagtggcagaactgcctcaagcagataaggtggaatccaca
actgactcacacttccccagacaggatcagttgccctcatttccaaagaactgcactctg
gaattaaagggtctcttctattttgaagaaagcctccaaaagctgtatcagtgcaatggg
acagcctggaaagcctggagcccccaaactaaggaggtggaggacaaaccctgcccagct
gggtggcaccatcactcaggctactgccactccttgatcacggagcagaaacgcacctgg
actgcagctgcccaggcttgcagggaagaacacctgggtagccttgtaactgtcctcaca
aggcagcatatgcgatggctctgggacatcagtggaaggaggcccttctggataggtttg
aatgaccaagtacatgctggctactgggagtggattggtggtgagcctgtcaccttcacc
aactggaggaaagtgacccatcagcattcaaagcctggaaagaactgtgttttggttcat
agacaagggaaatggcaaacaaaggactgtaggcagggcaaacctcacagttatatatgc
tccaggaaactctaa
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integrated database retrieval system
