Loxodonta africana (African savanna elephant): 100669648
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Entry
100669648 CDS
T04351
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lav03000
]
100669648 (RC3H2)
04121 Ubiquitin system [BR:
lav04121
]
100669648 (RC3H2)
Transcription factors [BR:
lav03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100669648 (RC3H2)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100669648 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
100669648
NCBI-ProteinID:
XP_010585950
UniProt:
G3SSJ9
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEIAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGVSSAENSVSPLIPRSTENTLRVLETVKKVGKVGTNGQNAAGPSAE
SVTENKIGSPPKTPVSNIAATSAGPPNVGTELNSVPPKSSPFVTRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTRYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FSPRDRMNASPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTPLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSYEEQIRRKPE
QWAQYHTQKAPLVSSALPVATQSPTPPSPLFSVDFRTDLSESVSGTKFEEDQLSHYSPWS
CGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSEATP
SAHYVERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNFLSKEIELRNGENDYTEDTTDSKPDRDIELELSALDTDEPDGQGEQIEEILDI
QLGITSQNDQLLNGTAVENGHSVQQHQKESLEQKRQSLGEDHVILEEQKTILPVTSCFSQ
PLPVSISNASCLPITTSASVGNLILKTHAMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgatcagactgccatcaacacagac
attgacgtgcttcctgtcaattttgcacttctccagttagtgggagcccaggtaccagat
catcagtcaataaagttgagtaatctaggtgagaacaaacactatgaaattgcaaagaaa
tgtgttgaagatttggcactctacttaaaaccactaagtggaggaaaaggtgtagctagt
ttgaaccagagtgcactgagccggccaatgcaaagaaaactggtgacacttgtcaactgt
cagctggtagaagaagaaggtcgtgtaagagccatgcgagcagcccgttcccttggagaa
agaactgtaacggaactgatattacagcaccagaaccctcagcaattgtctgccaaccta
tgggctgcggtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaaactggtgttgctagcgttagaagatggctccgctctctcaaggaaagttctggta
ctttttgttgtgcaaagactggaaccaagatttcctcaggcatcaaaaacaagcattggt
catgtcgtgcaactactgtatcgagcttcttgttttaaggtcactaaaagggatgaagac
tcttccctgatgcaactgaaggaggaatttcggagttatgaggcattacgcagagaacat
gatgcccagattgttcatattgctatggaagcaggacttcgtatttcacctgagcagtgg
tcctcacttctatatggtgacttagcacataaatcacacatgcagtctatcattgataag
ctccagtctccagaatcatttgcaaagagcgtccaagaattgacaattgttttacaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gatcctaacccagatgctgtttcaccaacctgggagcagctggaaaatgcaatggtagct
gttaaaacagtggttcatgggcttgtagatttcatacagaattatagtagaaaaggccat
gaaacgcctcagcctcagccgaacagtaaatacaagactagcatgtgccgagacctacga
caacaaggcgggtgtccacgaggaacaaattgtacatttgcccattctcaggaagaactt
gagaagtatcgattaaggaacaaaaagatcagtgcaactgtaagaacgtttcctcttcta
aataaagttggtgtgaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacagggaaaattgttccaagtacaaatggagtttcaagtgcagaa
aacagtgtttctccactaatcccacgtagtactgagaatacattaagagttctggagact
gtgaagaaagtggggaaggttggcactaatggtcagaatgctgctgggccctctgcagag
tccgtaactgaaaataaaattggttctccacccaagactcctgtaagtaatatagcagct
acctcagctgggccccctaatgttggaacagagctgaattctgtgcctccaaaatctagc
ccatttgtaactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggactcagataccttttgaagtcccacagtacccgcagacaagatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgcttcgtgaggtccaat
aatgttccagagtcctccctcccacctgcttccgtgccatatgctgatcattacagtaca
ttttcccctcgagatcgaatgaatgcttctccttaccaacctcctcctccgcagccgtat
ggtccagttcctccagtaccttctggaatgtatgcccctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcgtctgtctatcagacgcctttgagggaaagatataactcattagat
ggttattattcagtggcttgtcagccaccaagtgagccaaggacaaccgtgcctttacca
agggaaccttgtggtcatttgaagaccagttacgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcagctcttcctgtggca
acgcaatcaccaacaccgccttctcctctattcagtgtagactttcgcactgatctctct
gagagcgtgagtggtacaaaatttgaagaagatcaactttcccattattctccctggtct
tgtggcaccataggctcctgtataaatgccatcgattcagagcccaaagatgtaattgct
aattccaatgctgtgttaatggacctggacagtggagatgttaagaggagagtacattta
tttgaaactcagagaaggacaaaagaagaagacccgataattccttttagtgatggacct
atcatctcaaaatggggtgcaatttccagatcttctcgtacaggttaccataccacggat
cctgtccaggccactgcttcccaaggaagtgcgactaagcccatcagtgtgtcagattac
gtcccttatgttaatgctgttgattcaaggtggagttcatatggcagtgaggccacgcca
tcagcacactatgtggaacgggatagattcattgttactgatttatctggtcatagaaag
cattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcatta
cttcttcagagagaggccaatgctctggctatgcaacagaagtggaattccttagatgaa
ggtcgtcaccttactttaaattttctgagcaaggaaattgaattaagaaacggagagaat
gattatacagaagatacaacagattctaagcctgatagagatattgaattggaactttcg
gcacttgatacagatgaacctgatggacaaggtgaacaaattgaagagatcctggacata
caacttggtatcacttctcaaaatgatcagttgctgaatggaacagcagtggaaaatgga
cattcagtccagcagcaccaaaaggagtcactagagcagaagagacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtgacttcttgctttagccag
ccacttccagtgtccattagcaatgcaagttgcctccccatcaccacatctgccagtgtt
ggcaacctcatcctgaaaactcatgctatgtctgaggataaaaatgactttttaaaacct
gttgcaaatgggaagatggttaacagctga
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integrated database retrieval system
