Loxodonta africana (African savanna elephant): 100669675
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Entry
100669675 CDS
T04351
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03440
Homologous recombination
lav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100669675 (BLM)
03460 Fanconi anemia pathway
100669675 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lav03032
]
100669675 (BLM)
03400 DNA repair and recombination proteins [BR:
lav03400
]
100669675 (BLM)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100669675 (BLM)
DNA replication proteins [BR:
lav03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100669675 (BLM)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
100669675 (BLM)
Bloom's syndrome complex (BTR)
100669675 (BLM)
FA (Fanconi anemia) pathway
100669675 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
Motif
Other DBs
NCBI-GeneID:
100669675
NCBI-ProteinID:
XP_003413923
LinkDB
All DBs
Position
Unknown
AA seq
1429 aa
AA seq
DB search
MAAVPQNNLQEQLERHSARKLNDKLSLSKPKSSGFTFKKKTSSDNDVSITSVSVAKKPVL
SDKDAGVAAAVSFSEPLPHTSSRQTRLHDFLQNAPADQEITRGGSKPLSPDLLQTPGEVS
CTARNTPAVRESHDVTCKKLKFSSSTASLITINDWDDMDDFDISGNSEAFVTPLRTHNVR
ISTAQKSKKGKRNFLKSQLHKADVVKVDLTSSSAESEQVDLTKEQQNDSEWLSGGVVCIE
DDPISKRLVDEETQESDPLKTHLGDEKGNSEKKKSLQDTELYSVEKSPRVDLDEDDYDRD
FVPPSPEEIISSTSSSLKCFSMVKDLDTSDRKKDVLSTSEDLLSKPEKMTAQQPNQETST
DCDAERLSLQQQLIRVMEDICKLVDTIPADELETLDCGNELLQQRNIRRRLLADAGFNRS
DAGFLGSLWRCRPNLLDIPVEGVAFSQGDFCPTENSVQELNFPHLPSNSISTGTCLPTAT
PGKTGFLATPKNLSERPLFSSQLQRSFVSSSCAVTPGREERNGRSSYFPGSVLTSTAVKD
PHKHTASTNDLERREVSEIQASYDIDHFDIDDFDDDDDWENIMQNLTASKSATAAYPPIK
EGRPIKSVAERISSAKTNCLPVASAAQNKNFSESTQNYTDKPEQNFASRNLKHEHFQSLD
FPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACIAPG
VTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPE
KVCASNRLISTLENLYQRTLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPLVPVMA
LTATANPRVQKDILTQLKILKPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPY
DSGIIYCLSRRECDTMAETLKKNGLAALAYHAGLSDCARDEVQHKWINQDGCQVICATVA
FGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILTE
KDGNQHTKETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPYFCKKYPEVSCDNCCK
TKDFKTRDVTDDVKNIVRFVQEYNSSQGMKNIKHAGPSGRFTMNMLVDIFLGSKSAKIQS
GIFGMGSAYSRHNAERLFKKLILDKILDEDLYINANDQAIAYVMPGTEAQTVLNGHLKVD
FMETENSSSVKKQKALEAKVSQREEMVKKCLGELTEICKSLGKVFGVHYFNIFNTATLKK
LAESLSSDPEVLLQIDGVTEDKLEKYGAEVIPILQKYSEWTLPAEDNSPQRSLSSSRGPG
RNTPEELGEETPISSHYFASKTKNERKRKRMPAFQKSKKRKSGYGGSGAQGGPIVCRKTS
SKTKSSDMFGSSSAFVGFQATSVASRKLGIMAPPKPKNRPFLKPSYAFS
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttcctcaaaataatctacaggagcaactggagcgtcattcagccagaaaa
cttaatgataaattaagtctttcaaaaccaaaatcttcaggtttcacttttaaaaagaaa
acatcttctgataacgatgtgtctataactagtgtgtcggtagctaaaaaacccgtgtta
agtgataaagatgctggtgttgcggcggccgtctccttcagtgagcctttaccccacacc
tcaagtcgccagacaaggctccatgacttcttgcagaatgctccggcagatcaggaaatc
acaagaggtggttcaaaaccactgtcgccagatttgttgcagactccaggggaagtttca
tgtactgcccgaaacacaccagctgtcagggaatcccatgatgttacttgcaagaaatta
aaattcagttcttcaacagcttccttaattaccatcaacgattgggatgatatggatgac
tttgatatttccgggaattcagaagcatttgttacaccacttagaactcacaacgtaaga
ataagcactgctcagaaatcaaaaaagggaaagagaaactttttaaaatcccagcttcat
aaagcagatgtggtaaaggttgacttgacttcttcctccgccgaaagcgagcaagtggac
ttaactaaggaacagcagaatgactcagaatggttaagtggcggcgtggtttgcattgag
gatgaccccatttccaaacgtcttgtagatgaagagactcaggaaagtgaccctttaaaa
actcatttgggagatgaaaaaggtaatagtgaaaagaagaagagtttgcaagacactgaa
ttatactcagttgagaaatctcctcgtgtggatcttgatgaggatgattatgatagagat
tttgtgccaccttctccagaagaaattatttcttccacttcttcctctttaaaatgcttt
agtatggtaaaagaccttgacacctctgacagaaagaaggatgttcttagcacatctgag
gaccttttatcaaaacctgagaaaatgactgcgcagcagcctaatcaagaaaccagcaca
gactgtgacgctgaacggttaagtttacagcagcagcttattcgtgtgatggaggacatc
tgtaaattagtggatacaattcctgctgatgaactggaaactttggattgtgggaatgaa
ttgcttcagcagcggaacataagaaggagactccttgctgatgcgggttttaacagaagt
gatgctggttttcttggctcactgtggagatgcaggcctaatttacttgatatccctgtg
gaaggtgtggcattttcacagggtgatttctgtcctacggagaattctgttcaggagtta
aatttcccacaccttccctcaaactccatttccactgggacatgtttaccaacggctacc
ccaggaaagacaggattcttagccacccctaagaatctctctgaaagaccgctattcagt
tcccagttacagaggtcctttgtaagtagcagctgtgctgtaacaccagggagagaagaa
agaaatggaagaagctcttatttccctggcagtgttctcacaagcactgctgtgaaagat
ccccataaacacactgcttcaacaaatgacttagaaagaagagaggtttcagaaatccag
gcttcctatgatattgatcattttgacatagacgactttgatgatgatgatgactgggaa
aatataatgcagaatttaacagccagcaaatctgccacagccgcctatccacctattaag
gaagggcggccaattaaatcagtagccgaaagaatttcttcagccaagacaaactgtctt
ccagtggcatctgctgctcaaaataaaaacttctcagagtcaactcaaaattacactgac
aagcctgagcaaaattttgcatccagaaatctgaaacacgagcatttccaaagtctggat
tttcctcatacaaaagaaatgatgaagatttttcataagaaattcggcctgcataatttt
agaactaatcagctggaggcgatcaatgctgcgctgcttggtgaagactgtttcatctta
atgcccactggaggtggtaaaagcctgtgttaccagctacccgcctgtattgctcctggg
gtcactattgtcatctctcccttgagatcactaatagtggatcaagtccaaaagctgact
tccttagatattccagctacatatctgacaggtgataagaccgactcagaggctacaagt
atttacctccagttatcaaaaaaagacccaattataaaacttctatatgttactccagag
aaggtctgtgcaagcaacaggctgatttctactctggagaatctgtatcagaggacgctc
ttggcacgttttgttattgatgaagcacattgtgtcagtcagtggggacatgattttcgt
caagattacaaaagaatgaatatgcttcgccagaaatttcccttggttccggtgatggct
cttactgccaccgctaatcccagggtacagaaggacattctcactcagctgaagattctc
aaacctcaggtgtttagcatgagttttaacagacataatctgaaatactatgtgttaccc
aaaaagcctaaaaaggtggcatttgattgcttagaatggatcagaaagcatcacccatat
gactcagggataatttactgcctctccaggcgagaatgtgacacaatggctgagacatta
aagaaaaatggccttgccgcccttgcttaccacgctggcctcagtgactgtgctagagat
gaagtgcagcacaagtggattaatcaggatggctgccaggtcatctgtgcgacagttgcg
tttggaatggggattgacaaaccggatgtgcgatttgtgatccacgcatctctgcctaaa
tccgtggagggttactaccaagaatctggtagagctggaagagatggggaaatatctcac
tgcctgcttttttatacctatcatgacgtgaccaggctgaaaagacttatattgacggaa
aaagatggaaaccaacatacaaaagagactcacttcaataatttgtacagcatggtacat
tattgtgaaaatataacggaatgcaggagaattcagcttttggcttactttggtgaaaat
gggtttaatccttatttttgtaagaaatacccagaagtttcttgtgataattgctgtaaa
acaaaggattttaagacaagagatgtgactgatgatgtgaaaaatattgtaagatttgtt
caagaatataattcatcacaaggaatgaaaaatatcaaacatgcaggtccttccggaagg
tttactatgaatatgctggttgacattttcctggggagtaagagtgcgaaaattcagtcg
gggatatttggaatgggatctgcttattcacgacacaacgctgaaagactttttaaaaag
ctgatacttgacaagattttggatgaagacttatatatcaatgccaatgaccaagcaatt
gcctatgtgatgcctggaacagaagcccaaactgtactgaatgggcatttaaaggtagac
tttatggaaacggaaaattccagcagtgtgaaaaaacaaaaagctttagaggcaaaggta
tctcagagagaagagatggttaagaaatgtcttggagaacttacagaaatctgcaaatct
ctggggaaagtttttggtgtccattacttcaatatttttaatactgccactctcaagaag
cttgcagaatctttatcttccgatcctgaggttttgcttcaaattgatggtgtgactgaa
gacaaactggaaaaatatggtgcagaagtgattccaatattacagaaatactctgagtgg
acattgccagctgaggacaattccccgcagagaagcctgtccagcagcagaggccccgga
agaaatacccctgaggagctgggtgaggaaacacccatatcttcccactattttgcaagt
aaaaccaaaaatgagagaaagaggaaaaggatgccagccttccagaaatctaagaagagg
aaaagtggttatggtggttccggtgcacaggggggacccatcgtgtgcaggaagacatct
tctaaaactaagtcctccgacatgtttggatctagttcagccttcgtcggttttcaagcg
acttcagtagccagtaggaaactggggattatggctccaccaaaacctaaaaacagacca
tttctgaagccttcatatgcgttttcataa
DBGET
integrated database retrieval system
