Loxodonta africana (African savanna elephant): 100669735
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Entry
100669735 CDS
T04351
Symbol
CIC
Name
(RefSeq) LOW QUALITY PROTEIN: protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100669735 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lav03000
]
100669735 (CIC)
Transcription factors [BR:
lav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100669735 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
100669735
NCBI-ProteinID:
XP_023398854
LinkDB
All DBs
Position
Unknown
AA seq
2515 aa
AA seq
DB search
MKPMKKTCTGLLGPGSGGGRSPPATRAKALRRRGAGEGDKPEEEEDEAQQQQQPGPEEAE
EGEEEETAERGPGLEGPPLELHPDDPTPGAAEDPKGEGEAGRWEPSLSRKTATFKSRAPK
KKYVEEHGAGSGGVAGAPDERARTPEEASTLGLPPRPPTSTRSSSTDTASEHSADLEDEP
MEACGPGPWPPRASTGSYDLRQLRSQRVLARRGDGLFQPAVVRQVRRSQDLGVQFPGDRA
LTFYEGVPGGGVDVVLDATPPPGALAVGTAVCTSVEPGVATYREGVVVEVATKPAAYKVR
LSPGPSSQPGPPPTLPQPPHREPEEAVWVARSSLRLLRPPWEPEALPRKPTTGPEEEQAE
PGVTLPSCPAALDPKQPEDAEVSKISFGSNLGACEEGEEKHPPALGTPALLPLPPPQLLS
PPPKSPAFTGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTAAQQKYKK
GDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADSGPGGA
GRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAVML
VSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRSRHL
SASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKPELLPHPG
ALGAPGTGGGGAAPDFPKNDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPSPLL
LLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEAGIASETRTGGPGRGC
RETPAPAGAASGKPGLPPPLQAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAFHPSPA
ALLPVLVPSSYTSHPAPKKEVIMGRPGTGWLSVSPRSVAVFPWHSLVPFLAPSQPDPSVQ
PSEAQQPASHPVASNQSKEPAESAAVAHEQTPGGTGSADPGRPPAATCPESPGPGPLHTL
GVVEPGKGPPPATEEEASGPPGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSL
SALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKIL
GEWWYALGPKEKQKYHDLAFQVKEAYFKAHPDWKWCNKDRKKSSSXAKPTSLGLAGGHKE
TRERSMSETGTAAAPGVSSELLSVAAQTLLSSDPKAPGSGSCGAERLHTVGGPGSARPRA
FSHSGVHSLDGGEADSQALQELTQMVSGPVSYSGPKPSTQYGAPGPFTAPGEGGALAASG
RPPLLPTRASRSQRVASEDMTSDEERMVICEEEGDDDVIADDGFSTTDIDLKCKERVTDS
ESGDSSGEDPEGSKGFGRKVFSPVIHSSFTHCRPPLDPEPPGPPDPPVAFGKGYGPTPSS
SSSSPASASTSAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGAGGPVTPSKPTRFLPTD
PATFRRKRPESVGSLEPPGPSVISAPPSGGGNILQTLVLPPNKEDREGSRARMPSAPAPS
LAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSSRAEASPNDTAGARTETGTG
SRAPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPA
PPAVQFIAQGAPGSGATSGSGTGAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQ
QLQVAPAPAAAPGTKVAAPSAPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPS
APPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSVSVRGGGAAQPLPLVSPPFSVPVQ
NGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGGHA
LPLGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQTPLLAPGQVGVSP
VPSPQLPPACATPGGPVITAFYPGSPAPTSSAPLAQPSQAPPGLVYTVATSTTTPAAAIL
PKGLPAPATATPAPTSPFPSVQVGSMTYSLVAPKAQXPTPKAPQKVKAAIASIPVGSFEA
GAPGRPGPATRQPLDPGPAREPTAPESELEGQPTTPAPPPPPETWASTARSSPPLPLPVE
ERTSTKGPEATASKFPSSSSEWRVPGLGLESRGEPPTPPSPAPAPVSCGIIGSSEGNSGR
AAGDTPERKEVASTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPS
PTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCE
GDIFTFDRTGTDAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAF
QARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPSTGTAAAPAPTPSP
AVGPDPNSPGSDSGSAPAAPPLPPPPELGPGQPGWEGAPQASPPSSGSSAAATGR
NT seq
7548 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaagacatgcactggccttctgggtcctggcagtggcggcggcagg
tccccaccagccaccagggccaaagccctgaggcggcgaggggctggggaaggcgacaag
ccagaggaggaggaagacgaggcgcaacagcagcagcagccagggccagaagaagctgaa
gagggtgaggaggaggagacagctgagcggggccctgggctagaagggccacccctggag
ctgcaccctgatgacccgaccccaggcgcagccgaggaccccaagggagaaggagaggca
ggccgctgggagccctcactcagccgcaagacagccacgttcaagtctcgagcgcctaag
aagaagtacgtggaggaacatggggctggcagcggcggggttgctggggcgcctgacgag
cgggcgcggacacccgaggaggctagcaccctgggtttgcctccacgaccacccacctcc
actcgctcctcttctacagacacagccagtgagcactcagctgacctggaggatgagcct
atggaggcctgtgggcctgggccctggccccccagggccagcactggcagctatgacctg
cggcagctgcggtcccagcgggtactggctcggcgtggcgatggcctcttccagccggcg
gtggtgcgccaggtgcgccgaagccaggacctgggcgtgcagttccctggtgaccgggcc
ctgactttctacgagggggtgccaggcggtggtgtagatgtggttctagatgccacgcca
ccaccaggtgcgctggcagtgggcacggctgtttgtaccagtgtggagcctggcgtggct
acctaccgtgagggggtagtagtggaggtggccaccaagccagctgcctacaaggtccgc
ctcagccctggccccagctcccagccaggccctccacctaccctaccgcagcccccacac
cgcgaacctgaggaggctgtgtgggtggcccgctccagcctgcgcctgctgcggcccccc
tgggaaccggaggccctgccgaggaagcccaccacaggccctgaggaggagcaggctgag
cccggggtcaccctgccgtcttgccctgctgccctggatcccaagcaacccgaggatgct
gaggtatccaagatcagctttggcagcaacctgggggcttgtgaagagggtgaagagaag
catccgccagccttaggcaccccagccttgctcccactgcctccgccccagctcctctca
ccaccccccaagtctccagccttcacaggcccaggccgccctggagagcagccctcgccc
tgccaggaggggagccagggtggcagtcggagcagtagtgtggcctccctagagaagggg
gcagcaccagcggcccgggctcgcacaccattgacagctgcccagcagaagtacaagaag
ggtgacgtggtctgtacacccaatggaatccgcaagaagttcaatggcaagcagtggcgt
aggctgtgctctcgagatggctgcatgaaggagtcacagcggcgaggctactgctcacgc
cacttgtccatgcgaaccaaggagatggagggcctggcagacagtgggccaggcggggct
gggcggccagctggcgtggcagcccgggagggcagcactgagtttgactggggtgatgag
acgtcgagggacagtgaggccagcagcgtcgcagcccggggagactcacgaccacgcctg
gtggcccctgctgatctgtcccgctttgagttcgatgagtgtgaggcggctgtgatgctg
gtgtcactgggcagctcgcgctcaggcacaccctccttctcccccgtctctacgcagtca
ccattctcacctgccccgtcaccctcaccctcgccgctcttcggcttccgccccgctaac
ttcagccccatcaacgcctccccggtcatccaacgcactgccgttcgcagtcgccatctg
agcgccagcacccctaaggctggtgtgctgacgccaccagacctgggcccccatccgcca
ccacctgccccacgggagcgccattcctccggcatcctgcccaccttccagaccaacctg
acctttactgtgcccatcagccctgggcggcggaagccagagctgctgccccacccaggg
gcgctgggggcccctggcaccgggggtggaggagctgccccagacttccccaagaatgac
agcctagactctggtgtggactcggtgtcccacacccctacaccctccacgccagccggc
tttcgggctgtgtcacctgctgtgcccttctcccgctcccgtcagccctcgccattgctg
ctgctgcccccacctgctggcctgacctcagatccagggccctctgtgcgcagagtgcct
gcggtacagcgggactcccccgtcattgtccgcaaccctgatgtaccactgccctccaaa
tttcctggggaggcaggcattgccagtgaaacccggactgggggacctgggcgggggtgc
cgtgagaccccagcacctgccggggcagccagtgggaagcctggcctgcccccaccccta
caggcccctgtgcccatcaccgtgcctccagctgcaccgactgccgtagcccagccgatg
cccacctttggcctggcttcttcgcccttccagcctgtggccttccacccctcacctgct
gccctgttgcctgtcttggtgcccagcagctacaccagccatcctgcccccaagaaggaa
gtcatcatgggccggcctgggacagggtggctgtcggtgtctcctcgctctgtggccgtg
ttcccctggcactccttagtccccttcctggcccccagccagcctgacccctccgtacag
ccaagcgaggcccagcaacccgccagccacccagtggcctccaaccagagcaaagaacct
gctgagtcggcagctgttgctcatgagcagacacctggtgggacaggaagtgctgaccct
gggcggccccctgcagccacatgccctgagagcccagggcccggacccctacacacactg
ggggtggtggaacctggcaagggtccccctcccgctactgaggaggaggcctctggcccc
ccaggagaatcccggctggacagtgagacggagagtgaccatgacgatgcctttctctcc
atcatgtcccctgagatccagttgcctctgccacctggaaaacgccggacccagtccctc
agtgctctgcccaaagaacgggactcatcttctgagaaggatggacgcagccccaacaag
cgggagaaggaccatatccggcggcccatgaatgcctttatgatcttcagcaagcgacac
cgggccctggtccaccagcgtcacccaaaccaggacaaccggactgtcagcaagatcctg
ggcgaatggtggtatgccctggggcctaaggagaagcagaagtaccatgacctggccttc
caggtgaaggaggcctacttcaaggctcacccagactggaagtggtgcaacaaggaccga
aagaagtccagttcataggccaagcccactagcctagggctggctggagggcacaaggag
acccgggagcggagcatgtcagagacaggcactgctgctgcccctggagtgtcatcggaa
ctcctgtctgtggcagcccagacacttttgagctcggaccccaaggctccagggagtgga
tcctgtggggcagaacggctgcacacagttgggggtcctggctcagcccgaccccgcgcc
ttctcccacagtggggtccatagcctggatggcggagaagcagacagccaggcactgcag
gaactgactcagatggtatccggcccagtgtcctactctggcccaaagcccagcacccag
tatggggctccaggccccttcacagctcctggcgaggggggtgccctggcggccagtgga
cggccccccctgctgcccactcgagcctctcgttcccagcgggttgccagtgaggacatg
accagtgacgaggagcgcatggtcatctgtgaggaagaaggggatgatgatgtcattgct
gacgatggcttcagcaccactgacattgatctgaagtgcaaggagcgggtgactgacagc
gaaagtggagacagctctggggaggaccccgagggcagcaagggctttggccggaaggtg
ttctcacctgtgatccattcctccttcacacactgccgtccgcccctggaccctgagccc
cccgggcccccggatccacctgtagcctttggcaagggctacggccccaccccgtcctcc
tcctcatcttcgcctgcctctgcctcaacctctgcagccacctccttctccctgggctca
ggaaccttcaaggcccaggagtcagggcaaggcagcacagcaggccccctacggcccccg
ccccctggggctgggggaccagtgacaccttccaagcccacccggttccttccaacggat
cctgccaccttccgacggaagagacctgaaagtgtggggagcctggagccaccaggcccc
tcagttatttcggcacctcccagtgggggaggaaacattctgcagacactggtcctgccc
ccaaataaggaggaccgggagggcagcagagcccgcatgccctcggcccctgctccatcg
ctggcctacggggccccagcagcccccctgtcccgcccagccgccaccatggtcaccaac
gtggtgcggcctgtcagcagcactcctgtgcccattgcctctaagcccttccccacctcc
agccgggctgaagcatctccaaatgacacggcaggtgccaggactgagacgggcactggg
tcccgggctcccgggggctccccgttgggtgtcagcttagtgtattcggacaagaagtcg
gcagcagccacctcaccagccccacacttggtggctgggcccctgctgggcactgtggga
aaggcacctgccactgttaccaacctgctggtgggcaccccaggctatggggcccccgca
ccccctgctgtccagttcattgcccaaggagcccctggcagtggggccacttcaggctct
ggaacaggtgctgggagtggccccaatgggccagtgcccctgggtatcttgcagccaggt
gccctgggcaaggctgggggaatcacccaggtgcagtatattctgcccacattgccccag
cagcttcaggtggcacctgccccagcagcagcccctgggaccaaggtagcagctcccagc
gcccctgcacccaccaccagcatccgtttcacgctcccaccgggcacctccaccaacggc
aaggtcctggctgccactgcacccactcctggcatccccatcctgcagtctgtaccttct
gctccaccccccaaagcccagtcggtgtctccggtgcaggccccacccccgggtggctca
gcccagctgctgcctgggaaggtactagtgcccctggcggcccctagtgtgtccgtgcgg
ggtggaggtgccgcccagccactgcccttggtgagcccgcccttctcggtacctgtgcag
aatggtgcccagccgcccagtaagatcatccagctgactccagtgccagtgagcacaccc
agtggcctggtgccacccctgagcccagccacattacctggacccacctctcagccccag
aaggtcctcctgccctcctctaccaggatcacctacgttcagtcagcaggcgggcacgca
ctgcccctgggtaccagccctgcatccagccaggctggaacggtcacctcatacgggccc
acgagctctgtagccctaggcttcacctcgctggggcccagtggccctgccttcgtgcag
cccctactctcagcaggccaaaccccactgctggctcccggccaggtgggcgtgtcacct
gtgcccagcccccagctgcctcctgcctgtgccacccctggagggcccgtcatcacagca
ttttaccctggcagccctgcacccacctcctcagcacccctggcccagccctcccaggcc
cccccaggcctggtctacactgtggccaccagcaccaccacccctgctgctgccatcttg
cccaagggccttccggcccctgccactgccaccccagcccccaccagcccctttcctagt
gtacaggtgggctccatgacctacagcttagtggcccccaaggcccagncgccaaccccc
aaggcccctcagaaagtgaaggcggccatcgccagcattcccgtgggttcctttgaggca
ggtgcccctgggcggcctggtcctgcgacccggcagccactggatcctggcccagcccgc
gagccaactgcccctgagtctgagcttgaggggcagcctacaactccagcccctccacca
ccccccgagacctgggcttcaacagcccggagcagccccccgctgcccttgcctgttgag
gagcggaccagcaccaagggtcctgaggccacggccagcaaattccccagctcatcctca
gagtggcgcgtccccgggctgggcctggagagtcgtggggagcctcccacccctcccagc
ccagcgccggctccagtctcttgtggcatcatcggcagcagtgagggcaacagcgggagg
gcggctggggatacccctgagcgcaaggaggtggctagtaccggcaagaaggtgaaggtg
cggcccccgcccctgaagaagacctttgactctgtggacaacagggtcctgtcagaggtg
gactttgaagagcgctttgctgagctgcctgaatttcggcctgaggaggtgctgccctct
cccaccctgcagtctctggccacctccccccgggccatcttgggatcctaccgcaagaag
agaaagaactccaccgacctggactcggcacccgaggaccccacctcgcccaagcgcaag
atgagaagacgctccagctgcagctctgagcccaacacccccaagagtgccaagtgtgag
ggagacatcttcacctttgaccgtacaggtacggatgctgaggatgtgcttggggagctg
gagtacgagaaggtgccgtactcgtcactgcggcgtaccctggaccagcgccgggccctg
gtcatgcagcttttccaggaccatggctttttcccctcagcccaggccacagcagccttc
caggcccgctacgcagacatcttcccctctaaggtctgtctgcagctgaagatccgtgag
gtgcgccagaagatcatgcaggcggctactcccacggagcagcccccaggggccgaggcc
cccctccccggaccgccctccactggcaccgctgctgcccctgctcccacgcccagccct
gctgtgggccctgaccccaactcacctggctcggactctggctcggccccggctgcgcca
ccactgcctccacccccagagctggggcccggacagcctggctgggagggggccccccag
gcctcccctccatcctctggctcttccgcagctgccacaggcaggtga
DBGET
integrated database retrieval system
