Loxodonta africana (African savanna elephant): 100669749
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Entry
100669749 CDS
T04351
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lav03016
]
100669749 (TRUB1)
Enzymes [BR:
lav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
100669749 (TRUB1)
Transfer RNA biogenesis [BR:
lav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100669749 (TRUB1)
Prokaryotic type
100669749 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
100669749
NCBI-ProteinID:
XP_010587273
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MAATEAAMASSSLSLETDTAPVLESAGTAAATAAISPATAAGATTEDPAETEAATASAEV
STETATAEAAAETAASTAEVGPETAAASAEAETETAAATAEAATETAAATAVTEAAAETQ
AATEAAAETEAAAGSEGGDTKSAMANKLLSLNGVFAVHKPKGPTSAELLNRLKEKLLAEA
GMPLPKCNKRKKQTFKIGHGGTLDSAAKGVLVVGVGRGTKMLTSMLSGTKRYIATGELGK
ATDTLDSTGKVTEEKPYDKITQEDIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRG
EAVEAKPARPVTVYSISLQKFQPPFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTR
TKQGPFTLEDHALPEEKWTIDDIAQALELCSSLLPEETGLKKPKPEEPKEEKEESKEQAL
SCECVSLNEVKVEENVIQTC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaccgaggcagcgatggcgtcgtcgtctttgtctttggaaacagacacagcc
ccagtgctagaaagtgcgggaacagccgcagcaacggccgcgatctcgccagcaacggct
gcaggcgcgacgactgaggatccggctgagactgaggccgcgacggcttcggctgaggtc
tcgactgagactgcgacggctgaagctgcggctgagactgcggcctctacagccgaggtt
gggcctgagactgcggctgcttcggccgaggctgagactgagactgcggccgctacggct
gaggctgcgactgagactgcggccgcaacggctgtgactgaggctgcggctgagactcaa
gctgcgaccgaggctgcggcagagactgaggccgctgctggatcggaagggggtgatacc
aagtccgctatggctaataagctgctgtccctaaacggcgtgttcgctgtgcacaagccc
aaagggcccacctcagccgagctgctgaatcggctgaaggagaagctgctggcagaagct
ggaatgccgcttccaaaatgcaacaagaggaaaaagcagactttcaaaattgggcatgga
ggaactctagacagtgcagccaaaggagttctggtggttggagttggaagaggaacaaaa
atgttgaccagtatgctgtcagggaccaagaggtacattgccactggagaactgggaaaa
gctactgatacgctagattctacagggaaagtaacagaagaaaaaccttatgataaaata
acacaagaagatatcgaaggcattctacagaaatttactgggaatataatgcaagtaccc
cccctctattctgcattaaagaaggatggacagagactttcaactttgatgaagagaggt
gaagcagtagaagcaaaacctgccaggccagttactgtgtacagtatctcccttcaaaaa
ttccagcctccatttttcacattagatgttgaatgtggcggaggtttttatatcagaagc
ttggtcagtgacattggcaaagaactctcttcctgtgccaatgtgctagagctgacccga
accaaacagggaccatttacactagaagatcatgcccttcctgaagagaagtggaccatt
gatgatattgcacaggctctcgagctctgctcctctcttctcccagaagagacgggactt
aaaaaacccaaacctgaggagcctaaggaagagaaagaagagtctaaagaacaggccttg
agctgtgaatgtgtatcattaaatgaggtgaaggtagaggagaatgtaattcagacatgt
taa
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